TB-Profiler result

Run: ERR3283033
Summary

Run ID: ERR3283033

Sample name:

Date: 01-04-2023 01:18:28

Number of reads: 47641

Percentage reads mapped: 1.53

Strain: lineage4.9

Drug-resistance: Sensitive

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
rpoB 761015 c.1209G>C synonymous_variant 1.0
rpoB 761027 c.1221A>G synonymous_variant 1.0
rpoB 761036 c.1230G>C synonymous_variant 1.0
rpoB 761037 c.1231T>C synonymous_variant 1.0
rpoB 761057 c.1251G>C synonymous_variant 1.0
rpoB 761064 p.Ala420Ser missense_variant 1.0
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 1.0
rpoB 761102 c.1296A>G synonymous_variant 1.0
rpoB 761126 c.1320G>C synonymous_variant 1.0
rpoB 761132 c.1326G>T synonymous_variant 1.0
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 1.0
rpoB 761150 c.1344A>T synonymous_variant 1.0
rpoB 761162 c.1356G>C synonymous_variant 1.0
rpoB 761165 c.1359G>C synonymous_variant 1.0
rpoB 761168 c.1362C>G synonymous_variant 1.0
rpoB 761171 c.1365C>T synonymous_variant 1.0
rpoB 761177 c.1371G>C synonymous_variant 1.0
rpoB 761180 c.1374A>G synonymous_variant 1.0
rpoB 761189 c.1383T>G synonymous_variant 1.0
rpoB 761196 p.Leu464Phe missense_variant 1.0
rpoB 761207 c.1401C>T synonymous_variant 1.0
rpoB 761219 c.1413G>C synonymous_variant 1.0
rpoB 761234 c.1428G>C synonymous_variant 1.0
rpoB 761249 c.1443A>G synonymous_variant 1.0
rpoB 761252 c.1446C>G synonymous_variant 1.0
rpoB 761258 c.1452G>A synonymous_variant 1.0
rpoB 761261 c.1455G>C synonymous_variant 1.0
rpoB 761264 c.1458C>G synonymous_variant 1.0
rpoB 761537 c.1731C>G synonymous_variant 1.0
rpoB 761555 c.1749G>C synonymous_variant 0.67
rpoB 761558 c.1752C>G synonymous_variant 0.67
rpoB 761564 c.1758G>C synonymous_variant 1.0
rpoB 761570 c.1764T>C synonymous_variant 0.67
rpoB 761579 c.1773G>C synonymous_variant 1.0
rpoB 761612 c.1806G>C synonymous_variant 1.0
rpoB 761615 c.1809A>G synonymous_variant 1.0
rpoB 761622 p.Gln606Met missense_variant 0.67
rpoB 761636 c.1830G>C synonymous_variant 1.0
rpoB 761642 c.1836G>C synonymous_variant 0.67
rpoB 761643 p.Val613Ile missense_variant 0.67
rpoB 761646 p.Arg614Lys missense_variant 1.0
rpoB 761663 c.1857G>C synonymous_variant 1.0
rpoB 761666 c.1860G>C synonymous_variant 1.0
rpoB 761675 c.1869G>C synonymous_variant 1.0
rpoB 762002 c.2196C>G synonymous_variant 1.0
rpoB 762053 c.2247T>C synonymous_variant 1.0
rpoB 762065 c.2259T>C synonymous_variant 1.0
rpoB 762080 c.2274G>C synonymous_variant 1.0
rpoB 762083 c.2277T>C synonymous_variant 1.0
rpoB 762084 p.Ala760Pro missense_variant 1.0
rpoB 762101 c.2295C>G synonymous_variant 1.0
rpoB 762114 p.Ile770Val missense_variant 1.0
rpoB 762122 p.Asp772Glu missense_variant 1.0
rpoB 762128 c.2322G>C synonymous_variant 1.0
rpoB 762140 c.2334G>C synonymous_variant 1.0
rpoB 762143 c.2337T>C synonymous_variant 1.0
rpoB 762149 c.2343G>C synonymous_variant 1.0
rpoB 762156 p.Val784Ile missense_variant 1.0
rpoB 762176 c.2370T>C synonymous_variant 1.0
rpoB 762177 p.Arg791Asp missense_variant 1.0
rpoB 762181 p.Asp792Ala missense_variant 1.0
rpoB 762185 c.2379G>C synonymous_variant 1.0
rpoB 762209 c.2403C>G synonymous_variant 1.0
rpoB 762212 c.2406G>C synonymous_variant 1.0
rpoB 762233 c.2427G>C synonymous_variant 1.0
rpoB 762245 c.2439G>C synonymous_variant 1.0
rpoB 762251 c.2445G>C synonymous_variant 1.0
rpoB 762254 c.2448T>C synonymous_variant 1.0
rpoB 762257 c.2451C>G synonymous_variant 1.0
rpoB 762275 c.2469C>G synonymous_variant 1.0
rpoB 762284 c.2478G>C synonymous_variant 1.0
rpoB 762293 c.2487T>C synonymous_variant 1.0
rpoB 762317 c.2511A>G synonymous_variant 1.0
rpoB 762318 p.Ser838Thr missense_variant 1.0
rpoB 762329 c.2523G>C synonymous_variant 1.0
rpoC 763393 c.24T>C synonymous_variant 1.0
rpoC 763396 c.27A>G synonymous_variant 1.0
rpoC 763399 c.30C>G synonymous_variant 1.0
rpoC 763402 c.33C>G synonymous_variant 1.0
rpoC 763408 c.39T>C synonymous_variant 1.0
rpoC 763411 c.42T>G synonymous_variant 1.0
rpoC 763414 c.45T>G synonymous_variant 1.0
rpoC 763423 p.Glu18Asp missense_variant 1.0
rpoC 763430 c.61_63delAGGinsCGA synonymous_variant 1.0
rpoC 763435 c.66A>G synonymous_variant 1.0
rpoC 763442 p.Tyr25His missense_variant 1.0
rpoC 763456 c.87A>G synonymous_variant 1.0
rpoC 763468 c.99G>C synonymous_variant 1.0
rpoC 763483 c.114G>C synonymous_variant 1.0
rpoC 763486 c.117T>C synonymous_variant 1.0
rpoC 763495 c.126G>A synonymous_variant 1.0
rpoC 763504 c.135C>G synonymous_variant 1.0
rpoC 763507 c.138G>C synonymous_variant 1.0
rpoC 763528 c.159G>T synonymous_variant 1.0
rpoC 763534 c.165T>C synonymous_variant 1.0
rpoC 763537 c.168C>G synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763573 c.204G>C synonymous_variant 1.0
rpoC 763594 c.225C>T synonymous_variant 1.0
rpoC 763621 c.252C>T synonymous_variant 0.94
rpoC 763633 c.264T>C synonymous_variant 1.0
rpoC 763636 c.267T>C synonymous_variant 0.94
rpoC 763660 c.291T>C synonymous_variant 1.0
rpoC 763666 c.297G>T synonymous_variant 1.0
rpoC 763672 c.303C>G synonymous_variant 1.0
rpoC 763696 c.327T>C synonymous_variant 1.0
rpoC 763699 c.330G>C synonymous_variant 1.0
rpoC 763708 c.339G>C synonymous_variant 1.0
rpoC 763714 c.345G>C synonymous_variant 1.0
rpoC 763717 c.348T>C synonymous_variant 1.0
rpoC 763729 c.360G>C synonymous_variant 1.0
rpoC 763732 c.363C>G synonymous_variant 1.0
rpoC 763744 c.375G>C synonymous_variant 1.0
rpoC 764344 c.975C>T synonymous_variant 1.0
rpoC 764359 c.990C>G synonymous_variant 1.0
rpoC 764365 c.996C>T synonymous_variant 1.0
rpoC 764371 c.1002G>C synonymous_variant 1.0
rpoC 764377 c.1008C>G synonymous_variant 1.0
rpoC 764380 c.1011G>C synonymous_variant 1.0
rpoC 764387 c.1018T>C synonymous_variant 1.0
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 1.0
rpoC 764410 c.1041G>C synonymous_variant 1.0
rpoC 764428 c.1059G>C synonymous_variant 1.0
rpoC 764434 c.1065A>G synonymous_variant 1.0
rpoC 764435 c.1066A>C synonymous_variant 1.0
rpoC 764440 c.1071G>T synonymous_variant 1.0
rpoC 764441 p.Ile358Leu missense_variant 1.0
rpoC 764446 c.1077T>C synonymous_variant 1.0
rpoC 764449 c.1080G>C synonymous_variant 1.0
rpoC 764452 c.1083T>C synonymous_variant 1.0
rpoC 764458 c.1089G>C synonymous_variant 1.0
rpoC 764461 c.1092A>G synonymous_variant 1.0
rpoC 764470 c.1101C>G synonymous_variant 1.0
rpoC 764545 c.1176C>G synonymous_variant 1.0
rpoC 764548 c.1179G>C synonymous_variant 1.0
rpoC 764551 c.1182G>C synonymous_variant 1.0
rpoC 764566 c.1197C>G synonymous_variant 1.0
rpoC 764575 c.1206T>C synonymous_variant 1.0
rpoC 764581 c.1212T>C synonymous_variant 1.0
rpoC 764582 p.Leu405Met missense_variant 1.0
rpoC 764605 c.1236G>C synonymous_variant 1.0
rpoC 764611 c.1242G>C synonymous_variant 1.0
rpoC 764620 c.1251G>C synonymous_variant 1.0
rpoC 764635 c.1266C>G synonymous_variant 1.0
rpoC 764644 c.1275G>C synonymous_variant 1.0
rpoC 764646 p.Gly426Ala missense_variant 1.0
rpoC 764650 c.1281G>T synonymous_variant 1.0
rpoC 764653 c.1284G>C synonymous_variant 1.0
rpoC 764656 c.1287C>G synonymous_variant 1.0
rpoC 764662 c.1293G>C synonymous_variant 1.0
rpoC 764668 c.1299C>T synonymous_variant 1.0
rpoC 764701 c.1332C>G synonymous_variant 1.0
rpoC 764705 p.Leu446Ala missense_variant 1.0
rpoC 764722 c.1353G>C synonymous_variant 1.0
rpoC 764746 c.1377G>C synonymous_variant 1.0
rpoC 764752 c.1383G>C synonymous_variant 1.0
rpoC 764758 c.1389C>G synonymous_variant 1.0
rpoC 764764 c.1395T>C synonymous_variant 1.0
rpoC 764780 c.1411_1413delAGCinsTCG synonymous_variant 1.0
rpoC 764797 c.1428G>C synonymous_variant 1.0
rpsL 781754 c.195G>C synonymous_variant 1.0
rpsL 781760 c.201T>C synonymous_variant 1.0
rpsL 781763 c.204C>G synonymous_variant 1.0
rpsL 781766 c.207C>T synonymous_variant 1.0
rpsL 781772 c.213C>A synonymous_variant 1.0
rpsL 781793 c.234G>C synonymous_variant 1.0
rpsL 781796 p.Met79Ile missense_variant 1.0
rpsL 781802 c.243G>C synonymous_variant 1.0
rpsL 781808 c.249C>T synonymous_variant 1.0
rpsL 781811 c.252C>T synonymous_variant 1.0
rpsL 781817 c.258G>T synonymous_variant 1.0
rpsL 781832 c.273T>G synonymous_variant 1.0
rpsL 781838 c.279G>T synonymous_variant 1.0
rpsL 781859 c.300T>C synonymous_variant 1.0
rpsL 781862 c.303G>C synonymous_variant 1.0
rpsL 781865 c.306G>C synonymous_variant 1.0
rpsL 781868 c.309T>C synonymous_variant 1.0
rpsL 781871 c.312G>C synonymous_variant 1.0
rrs 1471916 n.71_72insAT non_coding_transcript_exon_variant 1.0
rrs 1471925 n.80T>G non_coding_transcript_exon_variant 1.0
rrs 1471928 n.83_84insTCGGG non_coding_transcript_exon_variant 1.0
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 1.0
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 1.0
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 1.0
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 1.0
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 1.0
rrs 1471991 n.146T>C non_coding_transcript_exon_variant 1.0
rrs 1471997 n.152T>C non_coding_transcript_exon_variant 1.0
rrs 1471998 n.153G>T non_coding_transcript_exon_variant 1.0
rrs 1472005 n.160T>G non_coding_transcript_exon_variant 1.0
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 1.0
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 1.0
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0
rrs 1472107 n.262A>G non_coding_transcript_exon_variant 1.0
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 1.0
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 1.0
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 1.0
rrs 1472148 n.303T>C non_coding_transcript_exon_variant 1.0
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 1.0
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 1.0
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 1.0
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 1.0
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 1.0
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 1.0
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 1.0
rrs 1472293 n.448C>A non_coding_transcript_exon_variant 1.0
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 1.0
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 1.0
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 1.0
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 1.0
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 1.0
rrs 1472338 n.493A>G non_coding_transcript_exon_variant 1.0
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 1.0
rrs 1472379 n.534T>C non_coding_transcript_exon_variant 1.0
rrs 1472382 n.537G>A non_coding_transcript_exon_variant 1.0
rrs 1472486 n.641A>G non_coding_transcript_exon_variant 1.0
rrs 1472494 n.649A>T non_coding_transcript_exon_variant 1.0
rrs 1472496 n.651T>G non_coding_transcript_exon_variant 1.0
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 1.0
rrs 1472507 n.662C>T non_coding_transcript_exon_variant 1.0
rrs 1472508 n.663T>C non_coding_transcript_exon_variant 1.0
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 1.0
rrs 1472571 n.726G>A non_coding_transcript_exon_variant 1.0
rrs 1472581 n.736A>C non_coding_transcript_exon_variant 1.0
rrs 1472583 n.738T>A non_coding_transcript_exon_variant 1.0
rrs 1472584 n.739A>T non_coding_transcript_exon_variant 1.0
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 0.93
rrs 1472673 n.828T>C non_coding_transcript_exon_variant 0.9
rrs 1472674 n.829T>A non_coding_transcript_exon_variant 0.9
rrs 1472675 n.830T>A non_coding_transcript_exon_variant 0.9
rrs 1472677 n.832C>A non_coding_transcript_exon_variant 0.9
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.92
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.92
rrs 1472793 n.948A>C non_coding_transcript_exon_variant 0.9
rrs 1472803 n.958T>C non_coding_transcript_exon_variant 1.0
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 1.0
rrs 1472825 n.980G>A non_coding_transcript_exon_variant 1.0
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 1.0
rrs 1472836 n.991G>A non_coding_transcript_exon_variant 0.9
rrs 1472840 n.995A>C non_coding_transcript_exon_variant 0.89
rrs 1472844 n.999C>A non_coding_transcript_exon_variant 0.89
rrs 1472845 n.1000G>A non_coding_transcript_exon_variant 0.89
rrs 1472851 n.1006A>G non_coding_transcript_exon_variant 0.89
rrs 1472856 n.1011T>C non_coding_transcript_exon_variant 0.89
rrs 1472862 n.1017T>C non_coding_transcript_exon_variant 0.89
rrs 1472863 n.1018T>C non_coding_transcript_exon_variant 0.89
rrs 1472873 n.1028C>T non_coding_transcript_exon_variant 0.89
rrs 1472875 n.1030T>G non_coding_transcript_exon_variant 0.89
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.89
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.78
rrs 1472958 n.1113A>G non_coding_transcript_exon_variant 0.78
rrs 1472973 n.1128A>G non_coding_transcript_exon_variant 0.86
rrs 1472974 n.1129A>G non_coding_transcript_exon_variant 0.75
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.75
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.86
rrs 1472988 n.1143T>C non_coding_transcript_exon_variant 0.86
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.86
rrs 1472996 n.1151T>C non_coding_transcript_exon_variant 0.89
rrs 1473026 n.1181T>C non_coding_transcript_exon_variant 0.93
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.94
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 1.0
rrs 1473062 n.1217T>G non_coding_transcript_exon_variant 1.0
rrs 1473068 n.1223A>G non_coding_transcript_exon_variant 1.0
rrs 1473089 n.1244A>T non_coding_transcript_exon_variant 1.0
rrs 1473091 n.1246G>A non_coding_transcript_exon_variant 1.0
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 1.0
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 1.0
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 1.0
rrs 1473120 n.1275C>T non_coding_transcript_exon_variant 1.0
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 1.0
rrs 1473122 n.1277T>A non_coding_transcript_exon_variant 1.0
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 1.0
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 1.0
rrs 1473201 n.1356A>T non_coding_transcript_exon_variant 0.96
rrs 1473202 n.1357C>T non_coding_transcript_exon_variant 0.96
rrs 1473252 n.1407T>C non_coding_transcript_exon_variant 0.93
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 1.0
rrs 1473283 n.1438T>C non_coding_transcript_exon_variant 0.92
rrs 1473315 n.1470T>C non_coding_transcript_exon_variant 0.94
rrs 1473316 n.1471C>T non_coding_transcript_exon_variant 0.94
rrl 1474476 n.819C>G non_coding_transcript_exon_variant 1.0
rrl 1474483 n.826C>G non_coding_transcript_exon_variant 1.0
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 1.0
rrl 1474496 n.839C>G non_coding_transcript_exon_variant 1.0
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 1.0
rrl 1474498 n.841G>T non_coding_transcript_exon_variant 1.0
rrl 1474505 n.848C>G non_coding_transcript_exon_variant 1.0
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 1.0
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 1.0
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 1.0
rrl 1474527 n.870T>C non_coding_transcript_exon_variant 1.0
rrl 1474528 n.871T>A non_coding_transcript_exon_variant 1.0
rrl 1474529 n.872A>G non_coding_transcript_exon_variant 1.0
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 1.0
rrl 1474540 n.883T>C non_coding_transcript_exon_variant 1.0
rrl 1474541 n.884G>T non_coding_transcript_exon_variant 1.0
rrl 1474542 n.885A>G non_coding_transcript_exon_variant 1.0
rrl 1474551 n.894G>C non_coding_transcript_exon_variant 1.0
rrl 1474558 n.901G>T non_coding_transcript_exon_variant 1.0
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 1.0
rrl 1474628 n.971C>T non_coding_transcript_exon_variant 1.0
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 1.0
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 1.0
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 1.0
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 1.0
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 1.0
rrl 1474651 n.995delT non_coding_transcript_exon_variant 1.0
rrl 1474660 n.1003G>A non_coding_transcript_exon_variant 1.0
rrl 1474662 n.1005C>G non_coding_transcript_exon_variant 1.0
rrl 1474676 n.1019T>C non_coding_transcript_exon_variant 1.0
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 1.0
rrl 1474688 n.1031G>C non_coding_transcript_exon_variant 1.0
rrl 1474690 n.1033C>T non_coding_transcript_exon_variant 1.0
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 1.0
rrl 1474717 n.1060_1061insGTGAG non_coding_transcript_exon_variant 1.0
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 1.0
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 1.0
rrl 1474736 n.1079C>T non_coding_transcript_exon_variant 1.0
rrl 1474751 n.1094G>A non_coding_transcript_exon_variant 1.0
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 1.0
rrl 1474777 n.1120T>G non_coding_transcript_exon_variant 1.0
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 1.0
rrl 1474780 n.1123C>T non_coding_transcript_exon_variant 1.0
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 1.0
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 1.0
rrl 1474801 n.1144G>A non_coding_transcript_exon_variant 1.0
rrl 1474802 n.1145T>C non_coding_transcript_exon_variant 1.0
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 1.0
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 1.0
rrl 1474896 n.1239A>T non_coding_transcript_exon_variant 1.0
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 1.0
rrl 1474905 n.1248T>C non_coding_transcript_exon_variant 1.0
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 1.0
rrl 1474933 n.1276A>G non_coding_transcript_exon_variant 1.0
rrl 1474934 n.1277C>T non_coding_transcript_exon_variant 1.0
rrl 1475696 n.2039T>C non_coding_transcript_exon_variant 1.0
rrl 1475699 n.2042C>T non_coding_transcript_exon_variant 1.0
rrl 1475703 n.2046A>G non_coding_transcript_exon_variant 1.0
rrl 1475740 n.2083G>C non_coding_transcript_exon_variant 1.0
rrl 1475747 n.2090A>G non_coding_transcript_exon_variant 1.0
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 1.0
rrl 1475758 n.2101A>G non_coding_transcript_exon_variant 1.0
rrl 1475759 n.2102C>T non_coding_transcript_exon_variant 1.0
rrl 1475760 n.2103_2104insACATTT non_coding_transcript_exon_variant 1.0
rrl 1475763 n.2106C>G non_coding_transcript_exon_variant 1.0
rrl 1475764 n.2107A>T non_coding_transcript_exon_variant 1.0
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.88
rrl 1475766 n.2109G>T non_coding_transcript_exon_variant 1.0
rrl 1475769 n.2112T>C non_coding_transcript_exon_variant 1.0
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 1.0
rrl 1475781 n.2124T>C non_coding_transcript_exon_variant 1.0
rrl 1475788 n.2131C>G non_coding_transcript_exon_variant 1.0
rrl 1475883 n.2226A>G non_coding_transcript_exon_variant 1.0
rrl 1475900 n.2243A>G non_coding_transcript_exon_variant 1.0
rrl 1475902 n.2245T>C non_coding_transcript_exon_variant 1.0
rrl 1475906 n.2249C>T non_coding_transcript_exon_variant 1.0
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 1.0
rrl 1475937 n.2280A>T non_coding_transcript_exon_variant 1.0
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 1.0
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 1.0
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 1.0
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 1.0
rrl 1475978 n.2321C>T non_coding_transcript_exon_variant 1.0
rrl 1475982 n.2325G>A non_coding_transcript_exon_variant 1.0
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 1.0
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 1.0
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 1.0
rrl 1476164 n.2507A>G non_coding_transcript_exon_variant 0.83
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.83
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 1.0
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 1.0
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 1.0
rrl 1476204 n.2547C>T non_coding_transcript_exon_variant 1.0
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 1.0
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 1.0
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.92
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.83
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 1.0
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.83
rrl 1476255 n.2598A>G non_coding_transcript_exon_variant 0.83
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 0.83
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.83
rrl 1476294 n.2637A>G non_coding_transcript_exon_variant 1.0
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 1.0
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 1.0
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 1.0
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 0.77
rrl 1476300 n.2643G>T non_coding_transcript_exon_variant 0.77
rrl 1476301 n.2644A>T non_coding_transcript_exon_variant 1.0
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 0.79
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 1.0
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 1.0
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 1.0
rrl 1476429 n.2772A>C non_coding_transcript_exon_variant 1.0
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 1.0
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 1.0
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 1.0
rrl 1476517 n.2860C>T non_coding_transcript_exon_variant 1.0
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 1.0
rrl 1476525 n.2868A>G non_coding_transcript_exon_variant 1.0
rrl 1476529 n.2872A>T non_coding_transcript_exon_variant 1.0
rrl 1476530 n.2873C>A non_coding_transcript_exon_variant 1.0
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 1.0
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 1.0
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 1.0
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 1.0
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 1.0
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 1.0
rpsA 1833829 c.288A>G synonymous_variant 1.0
rpsA 1833832 c.291G>A synonymous_variant 1.0
rpsA 1833838 c.297G>C synonymous_variant 1.0
rpsA 1833841 c.300C>G synonymous_variant 1.0
rpsA 1833847 c.306C>G synonymous_variant 1.0
rpsA 1833856 c.315A>G synonymous_variant 1.0
rpsA 1833862 c.321G>T synonymous_variant 1.0
rpsA 1833886 c.345C>G synonymous_variant 1.0
rpsA 1833893 p.Ala118Lys missense_variant 1.0
rpsA 1833896 p.Leu119Ile missense_variant 1.0
rpsA 1833904 c.363G>A synonymous_variant 1.0
rpsA 1833905 p.Lys122Glu missense_variant 1.0
rpsA 1833912 p.Glu124Gly missense_variant 1.0
rpsA 1833914 p.Ala125Ile missense_variant 1.0
rpsA 1833921 p.Lys127Thr missense_variant 1.0
rpsA 1833925 c.384C>T synonymous_variant 1.0
rpsA 1833928 c.387G>C synonymous_variant 1.0
rpsA 1833952 c.411C>T synonymous_variant 1.0
rpsA 1833955 c.414G>C synonymous_variant 1.0
rpsA 1833970 c.429G>C synonymous_variant 1.0
rpsA 1833973 c.432G>C synonymous_variant 1.0
rpsA 1833976 c.435C>T synonymous_variant 1.0
rpsA 1833979 c.438T>C synonymous_variant 1.0
rpsA 1833988 c.447C>G synonymous_variant 1.0
rpsA 1833994 c.453G>C synonymous_variant 1.0
rpsA 1833997 c.456G>C synonymous_variant 1.0
rpsA 1834000 c.459G>C synonymous_variant 1.0
rpsA 1834009 c.468C>T synonymous_variant 0.83
rpsA 1834012 c.471G>C synonymous_variant 1.0
rpsA 1834015 c.474G>C synonymous_variant 1.0
rpsA 1834024 c.483G>C synonymous_variant 1.0
rpsA 1834034 p.Ile165Val missense_variant 1.0
rpsA 1834046 p.Ile169Leu missense_variant 1.0
rpsA 1834093 c.552G>C synonymous_variant 1.0
rpsA 1834102 c.561T>C synonymous_variant 1.0
rpsA 1834246 c.705G>C synonymous_variant 1.0
rpsA 1834249 c.708T>C synonymous_variant 1.0
rpsA 1834261 c.720A>G synonymous_variant 1.0
rpsA 1834264 c.723G>C synonymous_variant 1.0
rpsA 1834294 c.753G>T synonymous_variant 1.0
rpsA 1834298 p.Gln253Glu missense_variant 1.0
rpsA 1834303 c.762T>C synonymous_variant 1.0
rpsA 1834306 c.765T>C synonymous_variant 1.0
rpsA 1834307 p.Asp256Gln missense_variant 1.0
rpsA 1834312 c.771G>A synonymous_variant 1.0
rpsA 1834327 c.786G>C synonymous_variant 1.0
rpsA 1834348 c.807T>C synonymous_variant 1.0
rpsA 1834354 c.813G>T synonymous_variant 1.0
rpsA 1834357 c.816T>C synonymous_variant 1.0
rpsA 1834360 c.819G>C synonymous_variant 1.0
rpsA 1834361 c.820T>C synonymous_variant 1.0
rpsA 1834366 c.825A>G synonymous_variant 1.0
rpsA 1834369 c.828C>G synonymous_variant 1.0
rpsA 1834378 c.837T>C synonymous_variant 1.0
clpC1 4038878 c.1827A>G synonymous_variant 0.67
clpC1 4039382 p.Ala441Ser missense_variant 1.0
clpC1 4039391 c.1314T>G synonymous_variant 1.0
clpC1 4039394 c.1311G>C synonymous_variant 1.0
clpC1 4039397 c.1308A>G synonymous_variant 1.0
clpC1 4039403 p.Glu434Asp missense_variant 1.0
clpC1 4039409 c.1296T>C synonymous_variant 1.0
clpC1 4039413 p.Ala431Val missense_variant 1.0
clpC1 4039415 p.Glu430Gly missense_variant 1.0
clpC1 4039430 c.1275T>C synonymous_variant 1.0
clpC1 4039442 c.1263A>C synonymous_variant 1.0
clpC1 4039448 c.1257A>G synonymous_variant 1.0
clpC1 4039454 c.1251A>G synonymous_variant 1.0
clpC1 4039463 c.1242C>G synonymous_variant 1.0
clpC1 4039466 c.1239T>C synonymous_variant 1.0
clpC1 4039469 c.1236T>C synonymous_variant 1.0
clpC1 4039472 c.1233G>C synonymous_variant 1.0
clpC1 4039481 p.Ala408Ser missense_variant 1.0
clpC1 4039487 c.1218G>C synonymous_variant 1.0
clpC1 4039517 c.1188C>G synonymous_variant 1.0
clpC1 4039526 c.1179G>C synonymous_variant 1.0
clpC1 4039532 p.Asn391Ser missense_variant 1.0
clpC1 4039541 c.1164C>G synonymous_variant 1.0
clpC1 4039570 p.Met379Leu missense_variant 1.0
clpC1 4039574 p.Ala377Ser missense_variant 1.0
clpC1 4039577 c.1128T>C synonymous_variant 1.0
clpC1 4039586 c.1119G>C synonymous_variant 1.0
clpC1 4039589 c.1116G>C synonymous_variant 1.0
clpC1 4039601 c.1104G>C synonymous_variant 1.0
clpC1 4039622 c.1083C>T synonymous_variant 1.0
clpC1 4039647 p.Glu353Pro missense_variant 1.0
clpC1 4039651 p.Val352Leu missense_variant 1.0
clpC1 4039654 p.Thr351Ser missense_variant 1.0
clpC1 4039661 p.Gly348Ala missense_variant 1.0
clpC1 4039664 c.1041G>C synonymous_variant 1.0
clpC1 4039670 p.Val345Ile missense_variant 1.0
clpC1 4039709 p.Ile332Leu missense_variant 1.0
clpC1 4039714 p.Tyr331His missense_variant 1.0
clpC1 4039724 c.981A>G synonymous_variant 1.0
clpC1 4039733 c.972G>C synonymous_variant 1.0
clpC1 4039739 c.966C>G synonymous_variant 1.0
clpC1 4039742 c.963C>T synonymous_variant 1.0
clpC1 4039751 c.954A>G synonymous_variant 1.0
clpC1 4039754 c.951G>C synonymous_variant 1.0
clpC1 4039757 c.948A>G synonymous_variant 1.0
clpC1 4039766 c.939T>C synonymous_variant 1.0
clpC1 4039773 p.Lys311Met missense_variant 1.0
clpC1 4039778 c.927A>G synonymous_variant 1.0
clpC1 4039781 c.924G>C synonymous_variant 1.0
clpC1 4039817 c.888A>C synonymous_variant 1.0
clpC1 4039820 c.885T>G synonymous_variant 1.0
clpC1 4039823 c.882T>C synonymous_variant 1.0
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 1.0
clpC1 4039832 c.873C>G synonymous_variant 1.0
clpC1 4039850 c.855T>C synonymous_variant 1.0
clpC1 4039858 p.Ile283Val missense_variant 1.0
clpC1 4039865 c.840T>C synonymous_variant 1.0
clpC1 4039875 p.Asn277Arg missense_variant 1.0
clpC1 4039889 c.816G>C synonymous_variant 1.0
clpC1 4039898 c.807C>G synonymous_variant 1.0
clpC1 4039904 c.801A>G synonymous_variant 1.0
clpC1 4039925 c.780C>G synonymous_variant 1.0
clpC1 4039929 c.775_776delAGinsTC synonymous_variant 1.0
clpC1 4039931 c.774T>C synonymous_variant 1.0
clpC1 4039934 c.771G>C synonymous_variant 1.0
clpC1 4039937 c.768G>C synonymous_variant 1.0
clpC1 4039945 p.Ser254Ala missense_variant 1.0
clpC1 4039946 c.759A>C synonymous_variant 1.0
clpC1 4039949 c.756G>C synonymous_variant 1.0
clpC1 4039952 c.753T>C synonymous_variant 1.0
clpC1 4039958 c.747G>C synonymous_variant 1.0
clpC1 4039967 p.Gln246His missense_variant 1.0
clpC1 4039982 c.723G>C synonymous_variant 1.0
clpC1 4040000 p.His235Lys missense_variant 1.0
clpC1 4040003 c.702G>C synonymous_variant 1.0
clpC1 4040015 c.690G>C synonymous_variant 0.75
clpC1 4040021 c.684A>C synonymous_variant 0.75
clpC1 4040024 c.681A>G synonymous_variant 1.0
clpC1 4040033 c.672G>C synonymous_variant 1.0
clpC1 4040063 c.642G>C synonymous_variant 1.0
clpC1 4040066 c.639G>C synonymous_variant 1.0
clpC1 4040087 c.618G>C synonymous_variant 0.89
clpC1 4040090 c.615T>G synonymous_variant 1.0
clpC1 4040117 c.588A>G synonymous_variant 1.0
clpC1 4040129 c.576C>G synonymous_variant 1.0