EBG00000313339 - n.1145T>C
Drug resistance types
37 Sensitive
27 RR-TB
16 HR-TB
44 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
212 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 18 |
| lineage1.2.2.2 | 5 |
| lineage2.2.1 | 50 |
| lineage4.3.3 | 9 |
| lineage3.1.2.2 | 2 |
| lineage3.1.1 | 10 |
| lineage3.1.3 | 2 |
| lineage4.9 | 87 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3 | 30 |
| lineage4.6 | 3 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2 | 6 |
| lineage4.2.2.2 | 10 |
| lineage4.1.1.3 | 8 |
| lineage4.3.1.1 | 5 |
| lineage4.3.4.1 | 4 |
| lineage4.2.1 | 5 |
| lineage3;lineage4 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.1.2.1 | 14 |
| lineage6.1.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 10 |
| lineage4.1.1.1 | 6 |
| lineage4.5 | 2 |
| lineage4.6.2.2 | 2 |
| lineage1.1.2 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1.1 | 6 |
| lineage2.2.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4.4.2 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.2 | 1 |
| lineage4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 3 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3.1.2 | 2 |
| lineage3.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 356 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22424765 | HR-TB | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7068875 | Other | lineage3.1.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR10796635 | Other | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR1183168 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR18149443 | Sensitive | lineage3 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181223 | Other | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7069314 | Other | lineage3 | None | SRR7070256 | Other | lineage4.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1183097 | Other | lineage4.9 | None | SRR1183214 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR1183175 | Other | lineage4.9 | None | SRR1183327 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180100 | Other | lineage4.9 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR9117725 | Other | lineage4.1.1.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR7069671 | HR-TB | lineage3 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR1183197 | Other | lineage4.9 | None | SRR3675276 | Sensitive | lineage4.1.2.1 | gb | ERR10796578 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR867544 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR7069664 | Other | lineage4.1.2 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1183268 | Other | lineage4.9 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR1182928 | Other | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR7070458 | Sensitive | lineage3 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818686 | Sensitive | lineage4.2.2.2 | dj | ERR11465829 | Sensitive | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR5007170 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR7068998 | Sensitive | lineage3.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR1183121 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR7070230 | Other | lineage2.2.1.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR7069258 | HR-TB | lineage3 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1181277 | Other | lineage4.9 | None | SRR1183360 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR7070665 | HR-TB | lineage3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR1183472 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR7070223 | HR-TB | lineage3 | None | ERR9117763 | HR-TB | lineage3 | None | SRR7069319 | Other | lineage4.5 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046815 | Other | lineage3 | None | SRR6045485 | Other | lineage4.9 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1183321 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | ERR10796599 | Other | lineage4.8 | None | SRR7069784 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR3675214 | Other | lineage4.9 | None | SRR1183678 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1182992 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR1180475 | Sensitive | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR1182883 | Other | lineage4.9 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069725 | Sensitive | lineage4.1.2.1 | None | SRR1183616 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR1180111 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1183710 | Other | lineage4.9 | None | SRR1183712 | Other | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR1183323 | Other | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR1183442 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1183322 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR1183314 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1180495 | Other | lineage4.9 | None | SRR1180559 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR1183511 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1183680 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11349210 | MDR-TB | lineage4.4.1.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR1183439 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR7070461 | Other | lineage3 | None | SRR1180125 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR1180672 | Other | lineage4.9 | None | SRR7070181 | Other | lineage3 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1180774 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1183358 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1180738 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR1183375 | Other | lineage4.9 | None | SRR3675565 | Other | lineage4 | None | SRR6046291 | Other | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18213721 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR1183304 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | ERR2027257 | Other | lineage4.1.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR867573 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | DRR188816 | Other | lineage4.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5007186 | Sensitive | lineage4.6 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR1180025 | Other | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7069255 | Other | lineage4.1.2 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183018 | Other | lineage4.9 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR7069797 | Sensitive | lineage3 | None | SRR1183133 | Other | lineage4.9 | None | SRR3675256 | Other | lineage4.7 | None | SRR1183307 | Other | lineage4.9 | None | SRR7069030 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1182908 | Other | lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR1181377 | Other | lineage4.9 | None | ERR10796582 | Other | lineage4.3.4.1 | None | SRR1180192 | Other | lineage4.9 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR5818672 | Other | lineage1.2.2.2 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR6046064 | Other | lineage3 | gb | ERR10796577 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1183193 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1183057 | Other | lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR1182885 | Other | lineage4.9 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR1180062 | Other | lineage4.9 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR5818610 | Other | lineage3 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR1183524 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | ERR2600609 | Other | lineage4.8 | None | SRR1183354 | Other | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1181193 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR1182923 | Other | lineage4.9 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR6046729 | Other | lineage3 | None | SRR1180455 | Other | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None |
|---|
