EBG00000313339 - n.1145T>C


Drug resistance types
50 Sensitive 44 RR-TB 22 HR-TB 43 MDR-TB 20 Pre-XDR-TB 1 XDR-TB 231 Other
lineage Counts
lineage Count
lineage4.4.1.1 18
lineage4.1.2.1 26
lineage4.8 23
lineage2.2.1 56
lineage4.4.1.1.1 5
lineage4.1.2 5
lineage2.2.1.1 4
lineage4.3.2.1 3
lineage4.6.3 1
lineage4.1.1 7
lineage4.1.1.3 10
lineage4.3.3 11
lineage4.2.2.2 10
lineage2.2.2 5
lineage4.8.1 1
lineage4.9 45
lineage3 37
lineage3.1.1 12
lineage4.2.1 4
lineage1.1.2 10
lineage2.2.2;lineage2.2.1 1
lineage4.5 3
lineage4.2.2 2
lineage4.4.1.2 1
lineage6 2
lineage1.2.1.2.1 2
lineage4 13
lineage1.2.2 2
lineage4.4.2 3
lineage4.7 6
lineage4.3.4.2.1 2
lineage1.2.2.2 9
lineage1.2.1.1 2
5
lineage4.1.1.3.1 7
lineage4.6 5
lineage3.1.2 3
lineage3.1 3
lineage3.1.2.1 3
lineage4;lineage3 1
lineage4.8.2 2
lineage4;lineage3.1.2.1 1
lineage3.1.2.2 5
lineage1.1.3.1 2
lineage4.3.1.1 5
lineage6.1.3 1
lineage4.6.4 1
lineage4.6.2.2 3
lineage3.1.3 2
lineage4.1.1.2 1
lineage1.1.3.3 1
lineage1.1.1.1 1
lineage4.6.5 1
lineage4.3.4.1 5
La1.8.1 3
lineage4.3.4.2 1
lineage4.9;lineage1.1 1
lineage4.3.2 2
lineage4.9;lineage4.3.4 1
lineage4.3 2
lineage4.3.4 1
La1.3 1
spoligotype Counts
spoligotype Count
None 411
Geographic prevalence
Country level data for this variant is available for 48 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9896153 RR-TB lineage4.4.1.1 None
ERR9786810 Sensitive lineage4.1.2.1 None
ERR9811805 MDR-TB lineage4.8 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315714 MDR-TB lineage4.4.1.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR11342679 Other lineage4.6.3 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11349184 MDR-TB lineage2.2.1 None
SRR11349135 XDR-TB lineage4.3.3 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349210 MDR-TB lineage4.4.1.1.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1173385 Sensitive lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11349208 MDR-TB lineage2.2.1 None
SRR1172065 Pre-XDR-TB lineage3 None
SRR1173515 HR-TB lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR12882669 RR-TB lineage3.1.1 None
SRR1184308 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR16156188 HR-TB lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR17406743 HR-TB lineage1.1.2 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002899 RR-TB lineage2.2.1 None
SRR1735591 Other lineage4.1.2.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002929 HR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003027 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213721 Other lineage4.8 None
SRR18149443 Sensitive lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18213736 MDR-TB lineage3 None
SRR18911555 Other lineage4.1.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19158679 Sensitive lineage4.4.1.1 None
SRR18913750 Other lineage2.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR19303907 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303985 Other lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304109 Other lineage4.8 None
SRR19304094 Other lineage6 None
SRR21595825 Other lineage1.2.1.2.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR3675474 Other lineage4.1.1 None
SRR22048536 Other lineage4.3.3 None
SRR22424765 MDR-TB lineage4 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4815425 Other lineage4.5 gb
ERR3275321 Sensitive lineage3.1.1 nl
ERR4815281 Other lineage4.4.2 None
SRR3675491 Other lineage4.7 None
ERR4815777 Other lineage4.9 None
ERR4815413 Other lineage4.3.4.2.1 None
ERR4814623 Other lineage4.8 None
SRR3675496 Other lineage4.1.1.3 gb
ERR1665404 Pre-XDR-TB lineage2.2.1 None
SRR3675230 RR-TB lineage3 None
SRR3675227 Other lineage4.9 None
ERR4815517 Other lineage1.2.2.2 None
SRR3675261 Other lineage1.2.1.1 None
ERR4814821 Other lineage2.2.1 None
SRR3675256 Other lineage4.7 None
SRR3675276 Other lineage4.1.2.1 gb
ERR4816968 Other lineage4.2.1 gb
SRR3675282 Other None
ERR4815039 Other lineage4.1.1.3.1 gb
SRR3675288 Other lineage3 None
ERR4814930 Other lineage4.4.1.1 None
SRR3675291 Sensitive lineage4.6 gb
ERR4816928 HR-TB lineage1.2.2.2 None
SRR3675509 Other lineage4.9 None
SRR3675511 Sensitive lineage4.6 None
ERR4815909 Other lineage4.8 None
SRR3675527 RR-TB lineage4.9 None
ERR4815956 Other lineage1.1.2 None
ERR2446580 Sensitive lineage3.1.1 nl
ERR2027250 Other lineage3.1.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027255 HR-TB lineage4.4.1.1 None
SRR3675552 RR-TB lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
SRR3675565 Other lineage3 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816782 Other lineage4.1.2.1 None
ERR4816657 Other lineage3.1.2.1 None
ERR4817492 HR-TB lineage3.1 gb
ERR4817189 Other lineage4.7 None
ERR4817294 Other lineage4.1.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4819002 HR-TB lineage4.8 None
ERR4817959 Sensitive lineage3.1.1 gb
ERR2513440 Other lineage4.1.1.3 None
ERR4818023 Other lineage4.1.2 gb
SRR5007165 MDR-TB lineage3 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007186 Other lineage4.6 None
SRR5007170 RR-TB lineage4.9 None
SRR5007178 Pre-XDR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007181 Sensitive lineage2.2.1 gb
ERR4820230 Other lineage4.1.2.1 gb
ERR2513652 Sensitive lineage4.1.1.3.1 gb
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR2513904 Other lineage3.1.2.2 gb
ERR2513994 MDR-TB lineage2.2.1 gb
ERR4819217 Other lineage1.2.2.2 None
ERR4819533 Other lineage1.1.2 None
ERR3275239 Sensitive lineage4.8 nl
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4820484 Other lineage4.8 None
ERR4820107 RR-TB None
ERR4819910 Other lineage4.9 None
ERR2514896 Other lineage3 gb
ERR4820801 Other lineage1.2.2 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045422 Other lineage4.3.1.1 None
SRR6046092 HR-TB lineage4.8 gb
SRR6045464 Other lineage4.1.1.3 None
SRR6045445 Other lineage4.3.1.1 None
SRR6045485 Other lineage4.9 None
SRR6045516 Other lineage3.1.1 None
SRR6045496 Other lineage6.1.3 None
ERR4821249 Other lineage4.6.4 gb
ERR4821214 RR-TB None
SRR6046117 RR-TB lineage4.9 None
ERR4821409 Other lineage4.8 None
SRR6045591 Other lineage4.1.2.1 None
ERR4821761 Other lineage3 gb
SRR6046113 Other lineage4.1.1.3 None
SRR6045599 Other lineage4.8 None
ERR4822085 Other lineage4.8 gb
ERR4822131 HR-TB lineage1.1.3.1 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045614 Other lineage4.8 None
SRR6045613 Other lineage3.1.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6046135 Other lineage4.1.2.1 None
SRR6045664 Other lineage4.2.1 None
SRR6045705 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045743 Other lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045749 Other lineage4.1.1 gb
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6045768 Other lineage4.1.2.1 gb
SRR5818612 Other lineage4.2.2.2 None
SRR6045778 Other lineage3.1 None
SRR5818610 Other lineage3 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818622 Sensitive lineage4.2.2.2 None
SRR5818624 Sensitive lineage3 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818686 Sensitive lineage4.2.2.2 dj
SRR5818677 Sensitive lineage1.1.2 dj
SRR5818669 Sensitive lineage1.2.2.2 None
SRR5818667 Sensitive lineage4.4.1.1 dj
SRR5818672 Other lineage1.2.2.2 None
SRR5818690 Other lineage4.2.2.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045876 Other lineage3 gb
SRR6045944 Other lineage4.1.2.1 None
SRR6045894 Other lineage4.8 None
SRR6044841 Other lineage4.9 None
SRR6044784 MDR-TB lineage3 None
SRR6044817 Other lineage3 None
SRR6044872 Sensitive lineage3.1.2.1 None
SRR6045928 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045957 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6044978 Sensitive lineage4.1.1.3.1 gb
SRR6044983 Other lineage3.1.1 None
SRR6045024 Other lineage4.1.1.2 None
SRR6045017 Other lineage3.1.2.2 None
SRR6044993 Other lineage3 None
SRR6045119 Other lineage3 gb
SRR6046159 Other lineage4.8.2 None
SRR6045056 Other lineage2.2.1 gb
SRR6045125 Other lineage1.1.2 None
SRR6045159 Other lineage3.1.1 None
SRR6046173 Other lineage3 None
SRR6046177 Other lineage3.1.2 None
SRR6045162 Sensitive lineage4.9 None
SRR6045288 Other lineage3 gb
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6045248 Other lineage3.1.1 None
SRR6045267 RR-TB lineage4 None
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6045295 Other lineage4.7 None
SRR6045289 Other None
SRR6045312 Other lineage1.1.3.3 None
SRR6046541 Other lineage4.9 None
SRR6046246 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046273 Other lineage3.1.2 None
SRR6046291 Other lineage3 None
SRR6046359 Other lineage4.7 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046508 Sensitive lineage3.1.2.2 gb
SRR6046528 Other lineage3.1.2.1 None
SRR6046064 Other lineage3 gb
SRR6045424 Other lineage1.1.2 None
SRR6046343 Other lineage2.2.1 None
ERR2851359 Other lineage4.9 None
ERR4829192 Other lineage4.4.1.1 None
SRR6046447 Sensitive lineage4.8 gb
SRR6046463 Other lineage4.4.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046534 Other lineage1.1.2 None
SRR6046607 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046641 Other lineage4.8 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046646 Other lineage4.7 gb
SRR6046679 Other lineage3 gb
SRR6046655 Other lineage4.1.2.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046852 MDR-TB lineage3 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046729 Other None
SRR6046743 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046766 Other lineage3.1.1 None
SRR6046818 Other lineage4.2.1 gb
SRR6046815 Other lineage3 None
SRR6046860 Other lineage4.4.1.1 None
SRR6046874 Other lineage4.5 None
SRR6367397 Other lineage4.1.2.1 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR6153150 Other lineage3.1.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6480593 Sensitive lineage4.1.2.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6398013 Other lineage4.1.2 ca
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR6982246 Sensitive lineage4 None
ERR4831863 HR-TB lineage2.2.1.1 None
ERR5162108 Other La1.8.1 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131121 Other lineage4.3.3 None
SRR7131075 Other lineage4.8 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR7131053 Other lineage2.2.1 None
SRR7131048 Other lineage4.4.1.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR9971032 RR-TB lineage2.2.1 None
SRR9971334 MDR-TB lineage4.3.2.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9971035 RR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR9971144 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
SRR9217359 MDR-TB lineage1.1.2 None
DRR184903 Sensitive lineage2.2.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796557 Other lineage4 None
ERR10796561 Other lineage4.3.2 None
ERR10796558 Sensitive lineage4 None
ERR10796563 Other lineage4.3.3 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796580 RR-TB lineage4.6 None
ERR10796571 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796586 Other lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796583 Other lineage2.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796615 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796623 Other lineage4.1.1 None
ERR10796634 Other lineage4 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796627 Other lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR4407446 Sensitive lineage3 None
ERR10796640 Other lineage4.1.2.1 None
ERR3283033 Sensitive lineage4.9 None
ERR10796635 Other lineage4 None
ERR3439229 Other La1.8.1 None
ERR3806588 Other lineage6 None
ERR4188372 RR-TB La1.8.1 None
ERR4796778 Sensitive lineage1.2.2.2 in
ERR4769539 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR5917711 Sensitive lineage4.8 by
ERR6197022 Other lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6197024 RR-TB lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117695 Other lineage4.1.2.1 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117708 Sensitive lineage3 None
ERR9117704 Other lineage4.6 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117729 Other lineage3 None
ERR9117725 Other lineage4.1.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117781 Other lineage3.1.3 None
ERR9117763 HR-TB lineage3 None
ERR9117780 Other lineage4.1.2.1 None
ERR9117788 Other lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117805 Other lineage4.3.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117827 Other lineage1.2.2.2 None