EBG00000313325 - n.726G>A
Drug resistance types
12 Sensitive
12 RR-TB
9 HR-TB
23 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 8 |
| lineage2.2.1 | 11 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2 | 4 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9 | 19 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4 | 5 |
| lineage4.4.2 | 3 |
| lineage3.1.1 | 3 |
| lineage4.8 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 5 |
| lineage4.6.2.2 | 2 |
| La1.7.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.4.1.1 | 1 |
| 2 | |
| lineage4.2.1.1 | 1 |
| lineage6.2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR1792024 | Other | La1.8.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR171135 | Other | lineage2.2.1 | za | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR5485475 | Other | None | ERR1750907 | RR-TB | None | SAMN02414885 | MDR-TB | lineage4.3.3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4816702 | RR-TB | lineage4.6.2.2 | None | SRR4033523 | Other | lineage2.2 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | SRR6982203 | HR-TB | lineage4.3.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR038289 | Other | lineage4.3.3 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10748372 | MDR-TB | lineage4.1.1.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4769453 | Other | La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4772215 | Other | La1.3 | None |
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