Run ID: SRR11972425
Sample name:
Date: 03-04-2023 05:42:24
Number of reads: 1496036
Percentage reads mapped: 46.01
Strain: lineage2.2.1
Drug-resistance: Pre-XDR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage2 | East-Asian | Beijing | RD105 | 1.0 |
lineage2.2 | East-Asian (Beijing) | Beijing-RD207 | RD105;RD207 | 1.0 |
lineage2.2.1 | East-Asian (Beijing) | Beijing-RD181 | RD105;RD207;RD181 | 0.99 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
gyrA | 7570 | p.Ala90Val | missense_variant | 0.78 | ofloxacin, moxifloxacin, levofloxacin, fluoroquinolones, ciprofloxacin |
rpoB | 761155 | p.Ser450Leu | missense_variant | 0.89 | rifampicin |
rpsL | 781687 | p.Lys43Arg | missense_variant | 1.0 | streptomycin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.98 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.88 | kanamycin, capreomycin, aminoglycosides, amikacin |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid |
pncA | 2289207 | p.Asp12Gly | missense_variant | 1.0 | pyrazinamide |
embB | 4247429 | p.Met306Val | missense_variant | 1.0 | ethambutol |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6581 | p.Thr448Val | missense_variant | 0.18 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 8798 | c.1497C>T | synonymous_variant | 0.12 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
mshA | 575199 | c.-149G>T | upstream_gene_variant | 0.12 |
mshA | 575907 | p.Ala187Val | missense_variant | 1.0 |
ccsA | 620625 | p.Ile245Met | missense_variant | 1.0 |
rpoB | 759615 | c.-192A>C | upstream_gene_variant | 0.36 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.12 |
rpoB | 761060 | c.1254C>G | synonymous_variant | 0.12 |
rpoB | 761063 | c.1257C>G | synonymous_variant | 0.12 |
rpoB | 761069 | c.1263C>T | synonymous_variant | 0.12 |
rpoB | 761084 | c.1278C>G | synonymous_variant | 0.12 |
rpoB | 761113 | p.Gln436Arg | missense_variant | 0.12 |
rpoB | 761147 | c.1341C>T | synonymous_variant | 0.12 |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.12 |
rpoB | 762795 | p.Asp997Asn | missense_variant | 0.13 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.31 |
rpoC | 762896 | c.-474G>C | upstream_gene_variant | 0.55 |
rpoC | 762917 | c.-453C>G | upstream_gene_variant | 0.63 |
rpoC | 762923 | c.-447C>G | upstream_gene_variant | 0.61 |
rpoC | 762926 | c.-444C>G | upstream_gene_variant | 0.64 |
rpoC | 762929 | c.-441G>T | upstream_gene_variant | 0.64 |
rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.62 |
rpoC | 762959 | c.-411G>C | upstream_gene_variant | 0.68 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.71 |
rpoC | 762980 | c.-390T>C | upstream_gene_variant | 0.69 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.73 |
rpoC | 762995 | c.-375G>C | upstream_gene_variant | 0.74 |
rpoB | 763005 | p.Cys1067Val | missense_variant | 0.73 |
rpoB | 763014 | p.Met1070Leu | missense_variant | 0.73 |
rpoB | 763017 | p.Gln1071Glu | missense_variant | 0.73 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.77 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763034 | c.-336C>G | upstream_gene_variant | 0.72 |
rpoB | 763038 | p.Thr1078Ala | missense_variant | 0.77 |
rpoC | 763052 | c.-318G>C | upstream_gene_variant | 0.76 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 0.8 |
rpoB | 763059 | p.Ile1085Val | missense_variant | 0.79 |
rpoC | 763067 | c.-303C>G | upstream_gene_variant | 0.74 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.78 |
rpoB | 763075 | p.Thr1090Ile | missense_variant | 0.78 |
rpoB | 763077 | p.Val1091Leu | missense_variant | 0.77 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.67 |
rpoC | 763133 | c.-237G>C | upstream_gene_variant | 0.57 |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.53 |
rpoC | 763160 | c.-210G>C | upstream_gene_variant | 0.12 |
rpoB | 763161 | p.Leu1119Ile | missense_variant | 0.12 |
rpoC | 763166 | c.-204A>G | upstream_gene_variant | 0.12 |
rpoB | 763170 | p.Leu1122Met | missense_variant | 0.12 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.14 |
rpoC | 763462 | c.93G>C | synonymous_variant | 0.15 |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.19 |
rpoC | 763483 | c.114G>C | synonymous_variant | 0.21 |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.23 |
rpoC | 763492 | c.123G>C | synonymous_variant | 0.25 |
rpoC | 763504 | c.135C>T | synonymous_variant | 0.27 |
rpoC | 763511 | p.Cys48Gly | missense_variant | 0.27 |
rpoC | 763517 | p.Lys50Gln | missense_variant | 0.26 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.25 |
rpoC | 763531 | c.162G>C | synonymous_variant | 0.25 |
rpoC | 763532 | p.Thr55Ser | missense_variant | 0.25 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.24 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 0.24 |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.3 |
rpoC | 763589 | p.Ile74Val | missense_variant | 0.32 |
rpoC | 763609 | c.240C>G | synonymous_variant | 0.36 |
rpoC | 763614 | c.246_251delGACCCG | disruptive_inframe_deletion | 0.32 |
rpoC | 763622 | p.Ala85Thr | missense_variant | 0.36 |
rpoC | 763627 | c.258_259insAGCTCC | conservative_inframe_insertion | 0.33 |
rpoC | 763630 | c.261G>C | synonymous_variant | 0.36 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.36 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.38 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.4 |
rpoC | 763660 | c.291T>C | synonymous_variant | 0.41 |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.43 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.41 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.37 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.36 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.31 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.3 |
rpoC | 763727 | p.Leu120Met | missense_variant | 0.29 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.22 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.16 |
rpoC | 763751 | p.Ile128Val | missense_variant | 0.13 |
rpoC | 764058 | p.Ala230Val | missense_variant | 1.0 |
rpoC | 764485 | c.1116G>C | synonymous_variant | 0.22 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.25 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.25 |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.28 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.27 |
rpoC | 764533 | c.1164C>T | synonymous_variant | 0.24 |
rpoC | 764536 | c.1167G>T | synonymous_variant | 0.22 |
rpoC | 764545 | c.1176C>G | synonymous_variant | 0.22 |
rpoC | 764548 | c.1179G>C | synonymous_variant | 0.3 |
rpoC | 764549 | p.Pro394Thr | missense_variant | 0.22 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.23 |
rpoC | 764561 | p.Pro398Ala | missense_variant | 0.21 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.32 |
rpoC | 764572 | c.1203G>C | synonymous_variant | 0.21 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.32 |
rpoC | 764576 | c.1207_1208delTCinsAG | synonymous_variant | 0.22 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.33 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.33 |
rpoC | 764605 | c.1236G>C | synonymous_variant | 0.12 |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.39 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.47 |
rpoC | 764635 | c.1266C>G | synonymous_variant | 0.4 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.61 |
rpoC | 764662 | c.1293G>C | synonymous_variant | 0.63 |
rpoC | 764695 | c.1326T>C | synonymous_variant | 0.68 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 0.62 |
rpoC | 764716 | c.1347G>C | synonymous_variant | 0.68 |
rpoC | 764737 | c.1368G>C | synonymous_variant | 0.64 |
rpoC | 764740 | p.Met457Ile | missense_variant | 0.56 |
rpoC | 764746 | c.1377G>C | synonymous_variant | 0.56 |
rpoC | 764750 | p.Val461Ile | missense_variant | 0.56 |
rpoC | 764759 | p.Asn464Gly | missense_variant | 0.6 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.62 |
rpoC | 764765 | p.Ala466Ser | missense_variant | 0.56 |
rpoC | 764780 | p.Ser471Ala | missense_variant | 0.67 |
rpoC | 764792 | p.Met475Ala | missense_variant | 0.62 |
rpoC | 764804 | p.Gln479Thr | missense_variant | 0.61 |
rpoC | 764813 | p.Gln482Glu | missense_variant | 0.62 |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.64 |
rpoC | 764833 | c.1464A>G | synonymous_variant | 0.59 |
rpoC | 764837 | p.Val490Ile | missense_variant | 0.56 |
rpoC | 764843 | p.Ala492Arg | missense_variant | 0.57 |
rpoC | 764850 | p.His494Arg | missense_variant | 0.57 |
rpoC | 764854 | c.1485G>C | synonymous_variant | 0.59 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.58 |
rpoC | 764872 | c.1503A>C | synonymous_variant | 0.58 |
rpoC | 764878 | c.1509C>G | synonymous_variant | 0.54 |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.43 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.43 |
rpoC | 764893 | c.1524T>C | synonymous_variant | 0.4 |
rpoC | 764902 | c.1533C>G | synonymous_variant | 0.33 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.27 |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.27 |
rpoC | 764917 | c.1548G>C | synonymous_variant | 0.26 |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.26 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.24 |
rpoC | 764948 | c.1579_1581delTTGinsCTC | synonymous_variant | 0.19 |
rpoC | 764953 | c.1584G>C | synonymous_variant | 0.16 |
rpoC | 764956 | c.1587T>C | synonymous_variant | 0.16 |
rpoC | 764958 | p.Glu530Ala | missense_variant | 0.16 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.15 |
rpoC | 764983 | c.1614T>C | synonymous_variant | 0.15 |
rpoC | 765462 | p.Asn698Ser | missense_variant | 1.0 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 776182 | p.Asp767Asn | missense_variant | 1.0 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 1.0 |
mmpS5 | 779647 | c.-742G>A | upstream_gene_variant | 0.15 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
Rv1258c | 1406760 | c.580_581insC | frameshift_variant | 0.95 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472102 | n.257G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.81 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472240 | n.395G>A | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472284 | n.439C>T | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472286 | n.441C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472289 | n.444T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472290 | n.445C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472293 | n.448C>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472297 | n.453_465delGTCCGGGTTCTCT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472312 | n.467_468insA | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472324 | n.479G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472328 | n.483G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472333 | n.488G>A | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472338 | n.493A>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472382 | n.537G>A | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472389 | n.544G>A | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472434 | n.589_590insC | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472437 | n.592T>C | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472438 | n.594delC | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472449 | n.604C>G | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472450 | n.605A>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472451 | n.606C>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472456 | n.611T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472460 | n.615T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472461 | n.616G>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472462 | n.617T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472463 | n.618G>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472467 | n.622G>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472471 | n.626G>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472473 | n.628G>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472474 | n.629C>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472476 | n.631A>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472496 | n.651T>G | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472507 | n.662C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472571 | n.726G>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472581 | n.736A>C | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472606 | n.761C>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472623 | n.778A>C | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472645 | n.800G>C | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472660 | n.815T>A | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472666 | n.821G>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472674 | n.829T>G | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472677 | n.832C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472682 | n.837T>A | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472683 | n.838T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472686 | n.841G>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472687 | n.842A>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472694 | n.849C>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472714 | n.869A>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472836 | n.991G>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472837 | n.992C>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472839 | n.994_995insG | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472842 | n.997G>A | non_coding_transcript_exon_variant | 0.84 |
rrs | 1472845 | n.1001delC | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472848 | n.1003T>G | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472854 | n.1009G>A | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472878 | n.1033G>A | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472953 | n.1109dupT | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472957 | n.1113delA | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472982 | n.1137G>A | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472988 | n.1143T>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472993 | n.1148G>T | non_coding_transcript_exon_variant | 0.9 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473097 | n.1252G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473122 | n.1277T>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473134 | n.1289T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473147 | n.1302G>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1473164 | n.1319C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473226 | n.1381C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1473269 | n.1424C>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473291 | n.1446_1447insT | non_coding_transcript_exon_variant | 0.9 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.93 |
rrs | 1473319 | n.1474C>T | non_coding_transcript_exon_variant | 0.9 |
rrs | 1473320 | n.1475G>A | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473324 | n.1479G>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1473391 | n.-267C>T | upstream_gene_variant | 0.43 |
rrl | 1473765 | n.108A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1473870 | n.213G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473871 | n.214T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473876 | n.219G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473887 | n.230T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473888 | n.231T>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473899 | n.242A>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474164 | n.507C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474166 | n.509G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474183 | n.526T>C | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474184 | n.527C>A | non_coding_transcript_exon_variant | 0.77 |
rrl | 1474201 | n.544T>C | non_coding_transcript_exon_variant | 0.81 |
rrl | 1474202 | n.545T>A | non_coding_transcript_exon_variant | 0.81 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1474265 | n.608G>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474275 | n.618T>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474351 | n.694G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474359 | n.702C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474414 | n.757C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474415 | n.758C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474416 | n.761_784delCACGCGCATACGCGCGTGTGAATA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474444 | n.787G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474451 | n.794T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474466 | n.809G>A | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474488 | n.831G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474516 | n.859C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474583 | n.926C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474601 | n.944C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474676 | n.1019T>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474709 | n.1053_1056delTGGT | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474717 | n.1060_1061insGTGAG | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474723 | n.1066G>A | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474770 | n.1113G>A | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.94 |
rrl | 1474790 | n.1133C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474794 | n.1137C>A | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474831 | n.1174A>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474905 | n.1248T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474920 | n.1263G>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474938 | n.1281G>A | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475104 | n.1447T>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475108 | n.1451C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475111 | n.1454G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475114 | n.1457C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475116 | n.1459G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475119 | n.1462C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475120 | n.1463G>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475124 | n.1467A>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475129 | n.1472G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475184 | n.1527T>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475508 | n.1851A>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475536 | n.1879C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475538 | n.1881T>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475539 | n.1882A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475548 | n.1891C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475549 | n.1892T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475550 | n.1893A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475649 | n.1992A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475692 | n.2035G>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1475735 | n.2078T>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1475757 | n.2100A>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475759 | n.2102C>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475776 | n.2119G>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475777 | n.2120A>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475791 | n.2134A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475916 | n.2259C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.9 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.9 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1475997 | n.2340A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476025 | n.2368G>T | non_coding_transcript_exon_variant | 0.85 |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476046 | n.2389G>T | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476047 | n.2390G>C | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476076 | n.2419A>G | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476079 | n.2422G>A | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476080 | n.2423T>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476081 | n.2424A>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476082 | n.2425T>C | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.91 |
rrl | 1476087 | n.2430C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476095 | n.2438C>T | non_coding_transcript_exon_variant | 0.87 |
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476105 | n.2450delA | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.94 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476297 | n.2640C>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476298 | n.2641C>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476309 | n.2652G>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.91 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476537 | n.2880A>G | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.77 |
rrl | 1476540 | n.2883C>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476544 | n.2887T>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476566 | n.2909A>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476586 | n.2929C>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476596 | n.2939C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1476601 | n.2944G>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476613 | n.2956G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476616 | n.2959A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476628 | n.2971T>G | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476630 | n.2973A>T | non_coding_transcript_exon_variant | 0.53 |
rrl | 1476661 | n.3004A>G | non_coding_transcript_exon_variant | 0.25 |
fabG1 | 1673641 | p.Val68Leu | missense_variant | 0.14 |
inhA | 1674653 | p.Pro151Gln | missense_variant | 0.13 |
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.13 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.14 |
rpsA | 1833685 | c.144G>C | synonymous_variant | 0.14 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.14 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.17 |
rpsA | 1833781 | c.240T>C | synonymous_variant | 0.22 |
rpsA | 1833782 | c.241_242delTCinsAG | synonymous_variant | 0.17 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.19 |
rpsA | 1833795 | p.Glu85Val | missense_variant | 0.21 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.28 |
rpsA | 1833805 | c.264C>G | synonymous_variant | 0.22 |
rpsA | 1833808 | c.267G>T | synonymous_variant | 0.24 |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.24 |
rpsA | 1833815 | p.Thr92Gln | missense_variant | 0.29 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.31 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.29 |
rpsA | 1833838 | c.297G>T | synonymous_variant | 0.36 |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.31 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.42 |
rpsA | 1833850 | c.309C>G | synonymous_variant | 0.33 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.42 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.4 |
rpsA | 1833884 | p.Thr115Asp | missense_variant | 0.44 |
rpsA | 1833887 | p.Ile116Val | missense_variant | 0.44 |
rpsA | 1833893 | p.Ala118Lys | missense_variant | 0.44 |
rpsA | 1833896 | p.Leu119Ile | missense_variant | 0.44 |
rpsA | 1833907 | p.Lys122Asn | missense_variant | 0.44 |
rpsA | 1833912 | p.Glu124Gly | missense_variant | 0.44 |
rpsA | 1833915 | p.Ala125Val | missense_variant | 0.4 |
rpsA | 1833921 | p.Lys127Thr | missense_variant | 0.4 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.36 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.31 |
rpsA | 1833955 | c.414G>C | synonymous_variant | 0.31 |
rpsA | 1833959 | p.Leu140Val | missense_variant | 0.33 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.33 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.24 |
rpsA | 1833988 | c.447C>G | synonymous_variant | 0.2 |
rpsA | 1833997 | c.456G>C | synonymous_variant | 0.13 |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 |
rpsA | 1834210 | c.669C>T | synonymous_variant | 0.13 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.19 |
rpsA | 1834231 | c.690T>C | synonymous_variant | 0.24 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.25 |
rpsA | 1834243 | c.702G>C | synonymous_variant | 0.23 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.24 |
rpsA | 1834255 | c.714C>G | synonymous_variant | 0.26 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.26 |
rpsA | 1834279 | p.Asp246Glu | missense_variant | 0.28 |
rpsA | 1834283 | p.Pro248Ala | missense_variant | 0.31 |
rpsA | 1834288 | c.747C>G | synonymous_variant | 0.32 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.35 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.35 |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.36 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.36 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 0.35 |
rpsA | 1834325 | p.Val262Ile | missense_variant | 0.41 |
rpsA | 1834333 | p.Asp264Glu | missense_variant | 0.43 |
rpsA | 1834340 | p.Met267Leu | missense_variant | 0.43 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.48 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.48 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 0.5 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.52 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.58 |
rpsA | 1834378 | c.837T>G | synonymous_variant | 0.6 |
rpsA | 1834384 | c.843A>G | synonymous_variant | 0.6 |
rpsA | 1834395 | p.Arg285Gln | missense_variant | 0.58 |
rpsA | 1834397 | p.His286Val | missense_variant | 0.58 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.6 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.57 |
rpsA | 1834430 | p.Val297Thr | missense_variant | 0.55 |
rpsA | 1834451 | c.910_912delTTGinsCTC | synonymous_variant | 0.45 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.38 |
rpsA | 1834482 | p.Glu314Ala | missense_variant | 0.33 |
rpsA | 1834486 | p.Glu315Asp | missense_variant | 0.36 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.36 |
rpsA | 1834501 | c.960G>C | synonymous_variant | 0.33 |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.23 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2156412 | c.-301C>T | upstream_gene_variant | 0.15 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2168988 | p.Thr542Ile | missense_variant | 0.15 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
pncA | 2289872 | c.-632dupC | upstream_gene_variant | 0.15 |
kasA | 2518399 | c.287_288delAG | frameshift_variant | 0.15 |
folC | 2747437 | p.Met54Ile | missense_variant | 1.0 |
thyA | 3074648 | c.-177T>G | upstream_gene_variant | 0.42 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
Rv3083 | 3449397 | c.894C>T | synonymous_variant | 0.13 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
Rv3236c | 3612428 | p.Ala230Glu | missense_variant | 0.12 |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 1.0 |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.17 |
clpC1 | 4038744 | p.Thr654Val | missense_variant | 0.17 |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 0.17 |
clpC1 | 4038767 | c.1938G>T | synonymous_variant | 0.18 |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 0.18 |
clpC1 | 4038773 | p.Asp644Glu | missense_variant | 0.18 |
clpC1 | 4038782 | p.Val641Ile | missense_variant | 0.17 |
clpC1 | 4038794 | c.1909_1911delAGCinsTCG | synonymous_variant | 0.16 |
clpC1 | 4038801 | p.Tyr635Phe | missense_variant | 0.16 |
clpC1 | 4038806 | p.Glu633Asp | missense_variant | 0.18 |
clpC1 | 4038810 | p.Gln632Pro | missense_variant | 0.17 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.17 |
clpC1 | 4038836 | c.1869G>C | synonymous_variant | 0.16 |
clpC1 | 4038842 | c.1863G>C | synonymous_variant | 0.18 |
clpC1 | 4039557 | p.Ala383Val | missense_variant | 0.12 |
clpC1 | 4039563 | p.Ala381Gly | missense_variant | 0.13 |
clpC1 | 4039565 | c.1140G>C | synonymous_variant | 0.13 |
clpC1 | 4039568 | p.Met379Ile | missense_variant | 0.13 |
clpC1 | 4039574 | c.1131G>C | synonymous_variant | 0.12 |
clpC1 | 4039586 | p.Ser373Thr | missense_variant | 0.12 |
clpC1 | 4039593 | p.Arg371Lys | missense_variant | 0.12 |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 0.12 |
clpC1 | 4039670 | p.Val345Ile | missense_variant | 0.13 |
clpC1 | 4039691 | c.1014G>C | synonymous_variant | 0.15 |
clpC1 | 4039711 | p.Ile332Phe | missense_variant | 0.28 |
clpC1 | 4039714 | p.Tyr331His | missense_variant | 0.3 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.33 |
clpC1 | 4039736 | c.969C>G | synonymous_variant | 0.32 |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.34 |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.34 |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.3 |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.32 |
clpC1 | 4039773 | p.Lys311Leu | missense_variant | 0.34 |
clpC1 | 4039778 | c.927A>G | synonymous_variant | 0.33 |
clpC1 | 4039793 | c.912C>G | synonymous_variant | 0.32 |
clpC1 | 4039811 | c.894C>G | synonymous_variant | 0.39 |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.37 |
clpC1 | 4039820 | c.885T>C | synonymous_variant | 0.38 |
clpC1 | 4039826 | c.879C>G | synonymous_variant | 0.38 |
clpC1 | 4039829 | c.874_876delTTGinsCTC | synonymous_variant | 0.41 |
clpC1 | 4039838 | p.Leu289Ile | missense_variant | 0.54 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.55 |
clpC1 | 4039853 | p.Leu284Val | missense_variant | 0.54 |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.59 |
clpC1 | 4039875 | p.Asn277Arg | missense_variant | 0.55 |
clpC1 | 4039887 | p.Leu273Thr | missense_variant | 0.59 |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.67 |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.7 |
clpC1 | 4039916 | c.789T>C | synonymous_variant | 0.62 |
clpC1 | 4039928 | c.775_777delAGCinsTCG | synonymous_variant | 0.56 |
clpC1 | 4039931 | c.774T>A | synonymous_variant | 0.55 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.49 |
clpC1 | 4039937 | p.Val256Ile | missense_variant | 0.52 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.57 |
clpC1 | 4039955 | c.750G>C | synonymous_variant | 0.56 |
clpC1 | 4039960 | p.Thr249Ser | missense_variant | 0.51 |
clpC1 | 4039964 | c.741C>G | synonymous_variant | 0.53 |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.53 |
clpC1 | 4040000 | p.His235Lys | missense_variant | 0.56 |
clpC1 | 4040003 | c.702G>C | synonymous_variant | 0.57 |
clpC1 | 4040009 | c.696C>G | synonymous_variant | 0.57 |
clpC1 | 4040018 | c.687G>C | synonymous_variant | 0.58 |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.59 |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.6 |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.61 |
clpC1 | 4040069 | c.636G>C | synonymous_variant | 0.53 |
clpC1 | 4040083 | p.Thr208Ser | missense_variant | 0.42 |
clpC1 | 4040087 | c.618G>C | synonymous_variant | 0.38 |
clpC1 | 4040090 | c.615T>G | synonymous_variant | 0.34 |
clpC1 | 4040096 | p.Val203Ile | missense_variant | 0.25 |
clpC1 | 4040105 | c.600C>G | synonymous_variant | 0.24 |
clpC1 | 4040108 | c.597G>C | synonymous_variant | 0.25 |
clpC1 | 4040117 | c.588A>G | synonymous_variant | 0.26 |
clpC1 | 4040129 | c.576C>G | synonymous_variant | 0.24 |
panD | 4044176 | p.Ala36Ser | missense_variant | 0.12 |
embC | 4241958 | p.Arg699Leu | missense_variant | 1.0 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4243460 | c.228C>T | synonymous_variant | 1.0 |
aftB | 4267647 | p.Asp397Gly | missense_variant | 1.0 |
ethA | 4326735 | p.Ala247Ser | missense_variant | 0.15 |
whiB6 | 4338425 | p.Val33Ile | missense_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 0.94 |
gid | 4407927 | p.Glu92Asp | missense_variant | 1.0 |