EBG00000313339 - n.659T>C
Drug resistance types
1 Sensitive
18 RR-TB
9 HR-TB
35 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4.9 | 19 |
| lineage4.2.1 | 10 |
| lineage4 | 1 |
| lineage2.2.1 | 44 |
| lineage4.8 | 5 |
| lineage2.2.2 | 3 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3 | 3 |
| La1.7.X-unk4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| La1.8.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.4.2 | 4 |
| lineage4.3.4.1 | 3 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.7 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.6.1.2 | 4 |
| La2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6046117 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1180446 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867573 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR19303899 | Other | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1173281 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR867572 | Other | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR5311077 | Other | La1.8.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR867571 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None |
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