Run ID: SRR21469202
Sample name:
Date: 04-04-2023 02:06:31
Number of reads: 1376284
Percentage reads mapped: 79.24
Strain: La1.7.1
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
La1 | M.bovis | None | None | 1.0 |
La1.7 | M.bovis | None | None | 1.0 |
La1.7.1 | M.bovis | None | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.21 | kanamycin, capreomycin, aminoglycosides, amikacin |
pncA | 2289073 | p.His57Asp | missense_variant | 1.0 | pyrazinamide |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 5752 | c.513G>A | synonymous_variant | 1.0 |
gyrA | 6406 | c.-896C>T | upstream_gene_variant | 1.0 |
gyrB | 6446 | p.Ala403Ser | missense_variant | 1.0 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 8285 | c.984C>T | synonymous_variant | 1.0 |
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 |
gyrA | 9217 | p.Asp639Ala | missense_variant | 1.0 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
ccsA | 619706 | c.-185G>A | upstream_gene_variant | 1.0 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.11 |
rpoC | 762899 | c.-471G>C | upstream_gene_variant | 0.11 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763589 | p.Ile74Val | missense_variant | 0.13 |
rpoC | 763609 | c.240C>G | synonymous_variant | 0.13 |
rpoC | 763614 | c.246_251delGACCCG | disruptive_inframe_deletion | 0.14 |
rpoC | 763622 | p.Ala85Thr | missense_variant | 0.13 |
rpoC | 763627 | c.258_259insAGCTCC | conservative_inframe_insertion | 0.14 |
rpoC | 763630 | c.261G>C | synonymous_variant | 0.14 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.16 |
rpoC | 763648 | c.279C>T | synonymous_variant | 0.17 |
rpoC | 763660 | c.291T>C | synonymous_variant | 0.16 |
rpoC | 763666 | c.297G>T | synonymous_variant | 0.16 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.12 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.11 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.11 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.11 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.11 |
rpoC | 764455 | c.1086G>C | synonymous_variant | 0.11 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.11 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.11 |
rpoC | 764485 | c.1116G>C | synonymous_variant | 0.16 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.17 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.17 |
rpoC | 764509 | c.1140G>A | synonymous_variant | 0.17 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.18 |
rpoC | 764524 | c.1155C>T | synonymous_variant | 0.16 |
rpoC | 764530 | c.1161C>T | synonymous_variant | 0.15 |
rpoC | 764533 | c.1164C>T | synonymous_variant | 0.16 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.16 |
rpoC | 764548 | c.1179G>T | synonymous_variant | 0.15 |
rpoC | 764549 | p.Pro394Thr | missense_variant | 0.15 |
rpoC | 764561 | p.Pro398Ala | missense_variant | 0.14 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.15 |
rpoC | 764575 | c.1206T>C | synonymous_variant | 0.12 |
rpoC | 764576 | c.1207_1208delTCinsAG | synonymous_variant | 0.12 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.13 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.12 |
rpoC | 764587 | c.1218C>G | synonymous_variant | 0.12 |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.14 |
rpoC | 764602 | c.1233C>T | synonymous_variant | 0.13 |
rpoC | 764605 | c.1236G>T | synonymous_variant | 0.13 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.14 |
rpoC | 764626 | c.1257C>A | synonymous_variant | 0.13 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
fbiC | 1302899 | c.-32A>G | upstream_gene_variant | 1.0 |
fbiC | 1305494 | c.2565_*55delGGCCTAGCCCCGGCGACGATGCCGGGTCGCGGGATGCGGCCCGTTGAGGAGCGGGGCAATCT | frameshift_variant&stop_lost&splice_region_variant | 0.3 |
Rv1258c | 1406161 | p.Ala394Thr | missense_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.11 |
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472496 | n.651T>G | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472507 | n.662C>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472571 | n.726G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472581 | n.736A>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472606 | n.761C>G | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472623 | n.778A>C | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472645 | n.800G>C | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472660 | n.815T>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472666 | n.821G>T | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472677 | n.832C>A | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472682 | n.837T>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472683 | n.838T>C | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472686 | n.841G>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472687 | n.842A>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472694 | n.849C>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472714 | n.869A>T | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.12 |
rrs | 1472982 | n.1137G>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472993 | n.1148G>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.26 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.26 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.27 |
rrs | 1473097 | n.1252G>A | non_coding_transcript_exon_variant | 0.34 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473122 | n.1277T>A | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473134 | n.1289T>C | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473147 | n.1302G>A | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473164 | n.1319C>T | non_coding_transcript_exon_variant | 0.3 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.3 |
rrs | 1473226 | n.1381C>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473269 | n.1424C>T | non_coding_transcript_exon_variant | 0.19 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.2 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.14 |
rrs | 1473291 | n.1446_1447insT | non_coding_transcript_exon_variant | 0.14 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474183 | n.526T>C | non_coding_transcript_exon_variant | 0.23 |
rrl | 1474184 | n.527C>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474201 | n.544T>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474202 | n.545T>A | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474265 | n.608G>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474275 | n.618T>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474280 | n.623C>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474291 | n.635_645delTTCCTCTCCGG | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474305 | n.648G>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474308 | n.653_654delTG | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474317 | n.660G>A | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474351 | n.694G>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474359 | n.702C>G | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474466 | n.809G>A | non_coding_transcript_exon_variant | 0.11 |
rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474583 | n.926C>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474639 | n.982G>C | non_coding_transcript_exon_variant | 0.1 |
rrl | 1474676 | n.1019T>A | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474717 | n.1060_1061insGTGAG | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474723 | n.1066G>A | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474770 | n.1113G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474790 | n.1133C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474794 | n.1137C>A | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474800 | n.1143T>C | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474832 | n.1175A>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.1 |
rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475764 | n.2107A>G | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1475896 | n.2239A>G | non_coding_transcript_exon_variant | 0.27 |
rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 0.27 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475916 | n.2259C>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.39 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.34 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.34 |
rrl | 1475997 | n.2340A>G | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476025 | n.2368G>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476045 | n.2388G>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476056 | n.2399G>A | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476076 | n.2419A>G | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476079 | n.2422G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476080 | n.2423T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476081 | n.2424A>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476082 | n.2425T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476087 | n.2430C>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476095 | n.2438C>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476104 | n.2448delG | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.31 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.35 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.35 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.39 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.39 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.39 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476297 | n.2640C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476298 | n.2641C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476309 | n.2652G>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.46 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476537 | n.2880A>G | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476540 | n.2883C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476544 | n.2887T>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476566 | n.2909A>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.1 |
rpsA | 1834859 | p.Ala440Thr | missense_variant | 1.0 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
ndh | 2103092 | c.-50T>C | upstream_gene_variant | 1.0 |
ndh | 2103173 | c.-132delG | upstream_gene_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2155503 | c.609C>T | synonymous_variant | 1.0 |
katG | 2156025 | c.87C>A | synonymous_variant | 1.0 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2168011 | p.Ser868Arg | missense_variant | 1.0 |
PPE35 | 2168319 | p.Thr765Ile | missense_variant | 1.0 |
PPE35 | 2168814 | c.1798dupA | frameshift_variant | 1.0 |
Rv1979c | 2222308 | p.Asp286Gly | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518132 | c.18C>T | synonymous_variant | 1.0 |
ald | 3086728 | c.-92C>T | upstream_gene_variant | 1.0 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
ald | 3087084 | c.266delA | frameshift_variant | 1.0 |
Rv3083 | 3448783 | p.Val94Ile | missense_variant | 0.93 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
fprA | 3474427 | p.Val141Ile | missense_variant | 1.0 |
fprA | 3475159 | p.Asn385Asp | missense_variant | 1.0 |
fbiB | 3642478 | p.Asp315Ala | missense_variant | 1.0 |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 1.0 |
embC | 4240671 | p.Thr270Ile | missense_variant | 1.0 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 0.99 |
embA | 4242970 | c.-263C>T | upstream_gene_variant | 1.0 |
embA | 4244220 | c.988C>T | synonymous_variant | 1.0 |
embB | 4246551 | p.Asn13Ser | missense_variant | 0.98 |
embB | 4246864 | c.351C>T | synonymous_variant | 1.0 |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 |
aftB | 4267100 | c.1737C>T | synonymous_variant | 1.0 |
aftB | 4267858 | p.Ile327Val | missense_variant | 1.0 |
aftB | 4269351 | c.-515C>T | upstream_gene_variant | 1.0 |
ubiA | 4269387 | p.Glu149Asp | missense_variant | 1.0 |
aftB | 4269606 | c.-770T>C | upstream_gene_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
fbiC | 1305494 | c.2565_*56delCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | frameshift_variant&stop_lost&splice_region_variant | 1.0 |