EBG00000313325 - n.832C>A
Drug resistance types
44 Sensitive
50 RR-TB
19 HR-TB
37 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 44 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.1.1.3 | 8 |
| lineage4.8 | 57 |
| lineage2.2.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage6.1.3 | 1 |
| La1.8.1 | 11 |
| lineage4.1.2.1 | 11 |
| lineage4.9 | 44 |
| lineage4.8;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage3 | 7 |
| lineage4.6.5 | 2 |
| lineage4.3.3 | 9 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.3 | 1 |
| lineage3.1.1 | 5 |
| lineage4.3.2.1 | 6 |
| lineage4.4.2 | 2 |
| lineage4.6.1.2 | 3 |
| La1.7.1 | 2 |
| La1.2 | 1 |
| lineage4 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.3.2 | 1 |
| La1.8.1;lineage4.9 | 3 |
| lineage4.3.4.1 | 4 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.1.2 | 2 |
| La1.3 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.7 | 2 |
| lineage4.2.1 | 6 |
| lineage4.4.1.2 | 3 |
| lineage4.3.2 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage4.4 | 1 |
| La2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| La1.4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 283 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR978694 | Other | lineage4.8 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3468613 | Other | La1.8.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4828879 | HR-TB | lineage3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR5908124 | Other | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4188375 | Sensitive | lineage4.9 | None | SRR6982272 | Sensitive | lineage4.9 | None | ERR2228838 | Other | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR7236134 | Other | La1.8.1 | None | SRR5163959 | Other | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR978762 | Other | lineage4.8 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR10796568 | Other | lineage4.9 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR19304104 | Other | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816470 | HR-TB | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | ERR6338285 | Other | La1.2 | None | ERR3283032 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR10380127 | Other | lineage4.3.3 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR1792025 | Other | La1.8.1 | None | ERR978751 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR1172885 | HR-TB | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4769517 | Other | La1.3 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR14801720 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6044952 | Other | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR978756 | Other | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR18002974 | Other | lineage2.2.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR2229811 | Other | lineage4.8 | dk | SRR6981918 | Sensitive | lineage4.4.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR3324345 | RR-TB | lineage4.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR10796556 | Other | lineage4.3.4.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769393 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | SRR7645928 | Other | lineage4.7 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR10796560 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR3797024 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR5818385 | Other | lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR978752 | Other | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | ERR911929 | Other | lineage4.8 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SRR1173833 | Other | lineage4.9 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR19303899 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR1792022 | Other | La1.8.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR4769480 | Other | La1.3 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR1181403 | Other | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4188352 | Sensitive | La1.8.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR16278292 | Other | La1.4 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR978735 | Other | lineage4.8 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796592 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4815816 | Other | lineage4.5 | gb | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | ERR5311077 | Other | La1.8.1 | None | SRR6046376 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR5979407 | Other | lineage3 | None | ERR736816 | Other | lineage4.9 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR1173421 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR3283009 | Other | La1.8.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR2229148 | Other | lineage4.8 | dk | SRR18002980 | Other | lineage2.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5818440 | Other | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None |
|---|
