EBG00000313339 - n.2883C>T
Drug resistance types
75 Sensitive
18 RR-TB
21 HR-TB
39 MDR-TB
18 Pre-XDR-TB
2 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.2.1 | 8 |
| lineage4.3.4.1 | 1 |
| 17 | |
| lineage4.9 | 23 |
| lineage4.4 | 1 |
| lineage2.2.1 | 29 |
| La1.8.1 | 8 |
| lineage4.4.1.1 | 1 |
| La1.7.1 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2 | 2 |
| lineage4.1.2.1 | 7 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4 | 48 |
| lineage4.1.1.3 | 6 |
| lineage4.3.4.2.1 | 4 |
| lineage1.1.2 | 3 |
| lineage3.1.3 | 1 |
| lineage4.8 | 5 |
| lineage4.1.1.2 | 2 |
| lineage3 | 5 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 2 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage6.1.1 | 3 |
| lineage4;La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 225 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR1792012 | Other | La1.8.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR21736381 | Sensitive | lineage4.3.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4812773 | HR-TB | lineage4.1.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750905 | Sensitive | lineage4.3.3 | za | SRR3675246 | Sensitive | lineage4 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675566 | Sensitive | lineage4.1.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817292 | Sensitive | lineage4.3.4.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818086 | Sensitive | lineage4.8 | None | SRR5341453 | Sensitive | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341319 | Other | lineage3 | None | ERR4820026 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5818448 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5818414 | Other | lineage4.9 | None | SRR6485141 | Sensitive | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6511621 | HR-TB | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4832062 | HR-TB | lineage2.2.1 | vn | ERR4831965 | HR-TB | lineage2.2.1 | vn | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR4831826 | MDR-TB | lineage2.2.1 | vn | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6855939 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971319 | MDR-TB | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9940983 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR8600152 | Other | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323107 | Other | lineage4 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR323066 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3799543 | Sensitive | lineage6.1.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4187652 | Other | lineage4.9 | None | ERR4188033 | Other | lineage4;La1.8.1 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR6866547 | Sensitive | lineage4 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9787099 | Sensitive | lineage6.1.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808805 | Sensitive | None | SRR1173310 | MDR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173777 | Other | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None |
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