EBG00000313325 - n.841G>A
Drug resistance types
23 Sensitive
11 RR-TB
16 HR-TB
11 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 9 |
| lineage4.9 | 22 |
| La1.8.1 | 4 |
| lineage4.5 | 1 |
| lineage4.3.3 | 2 |
| La1.7.1 | 3 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 9 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.8 | 3 |
| lineage6.1.1 | 2 |
| lineage4.3.3;lineage4.8 | 3 |
| La2;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.9;lineage9 | 2 |
| La1.3 | 5 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1.2 | 1 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13180204 | Other | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4812328 | Other | lineage4.3.3 | pe | SRR21469201 | Other | La1.7.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR5341303 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR228175 | Sensitive | lineage3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR5341453 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR4769514 | Other | La1.3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR4769555 | Sensitive | La1.3 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4769408 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4816470 | HR-TB | lineage3 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR987722 | MDR-TB | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1792025 | Other | La1.8.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR21469200 | Other | La1.7.1 | None |
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