EBG00000313325 - n.841G>A


Drug resistance types
23 Sensitive 11 RR-TB 16 HR-TB 11 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 29 Other
lineage Counts
lineage Count
La2;lineage4.9;lineage9 1
lineage2.2.1.1 4
lineage4.1.1.2 1
lineage4.1.1.3 2
lineage4.9 22
La1.8.1 4
lineage4.3.3 2
lineage1.2.1.2 1
lineage2.2.1 9
lineage3 9
lineage1.1.2;lineage6.2.3 1
lineage2.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage6.1.1 2
La1.3 5
La1.2;La1.8.1 1
La1.7.1 3
lineage4.6.2.2 1
lineage4.3.4.1 3
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage4.8 3
lineage4.3.3;lineage4.8 3
lineage3.1.2.1;lineage3.1.2.2 1
La2;lineage4.9 1
lineage4.9;lineage9 2
lineage4.5 1
lineage4.6.1.1 1
lineage4.1.2.1 2
1
lineage3.1.1 1
La1;lineage4.9 1
lineage4.2;lineage4.9 1
lineage6.1.2 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 96
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1181091 Other lineage2.2.1.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
SRR1792022 Other La1.8.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
SRR2100532 Sensitive lineage3 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR1175474 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR13180204 Other lineage3 None
ERR4769408 Other La1.3 None
SRR2100537 Sensitive lineage3 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR7240033 Other La1.2;La1.8.1 None
SRR5341303 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR5341298 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR21469202 Other La1.7.1 None
SRR1792011 Other La1.8.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR1175491 MDR-TB lineage4.3.4.1 None
ERR228175 Sensitive lineage3 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR6855695 Sensitive lineage4.8 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175052 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR21469200 Other La1.7.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4769423 Other La1.3 None
ERR228180 Sensitive lineage3 None
ERR108125 RR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR5087846 Other La1.8.1 None
ERR4816548 HR-TB lineage4.5 None
SRR21469201 Other La1.7.1 None
ERR4816470 HR-TB lineage3 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR5341461 HR-TB lineage4.9 None
ERR4796351 Sensitive lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1175473 Other lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4769514 Other La1.3 None
ERR4769555 Sensitive La1.3 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR5917985 MDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR16156804 Sensitive lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1172310 HR-TB lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR1792025 Other La1.8.1 None
ERR2515230 Sensitive lineage4.8 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR9787033 Sensitive lineage6.1.2 None
ERR2229198 Sensitive lineage4.8 None
SRR5341366 Sensitive lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR4812328 Other lineage4.3.3 pe
ERR4798648 MDR-TB lineage3.1.2.2 None