EBG00000313325 - n.841G>A
Drug resistance types
29 Sensitive
9 RR-TB
19 HR-TB
14 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.9 | 15 |
| lineage3 | 10 |
| lineage4 | 12 |
| La1.7.1 | 3 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 10 |
| 14 | |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 6 |
| La1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1.2 | 1 |
| lineage6 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage2.2.1.1 | 4 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1792011 | Other | La1.8.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2100537 | Sensitive | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR21469202 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR3675571 | HR-TB | None | ERR1750907 | RR-TB | None | ERR176740 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR4035842 | Sensitive | lineage4.4.1.1.1 | za | SRR4033523 | Other | lineage2.2 | None | ERR228180 | Sensitive | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | SRR5341298 | Sensitive | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | ERR2513201 | Sensitive | lineage3 | gb | ERR2513259 | Other | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4820503 | Other | lineage2.2.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046397 | Other | None | SRR5341470 | HR-TB | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830720 | Sensitive | lineage4.1.2.1 | dz | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769406 | Other | lineage4.9 | None | ERR4407473 | HR-TB | lineage4.3.4 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769543 | Sensitive | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4772204 | Other | La1.2 | None | ERR4769555 | Other | La1.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR736865 | HR-TB | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1172310 | HR-TB | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12882728 | Sensitive | lineage1.2.2.2 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None |
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