Rv0668 - c.1116G>C


Drug resistance types
89 Sensitive 119 RR-TB 74 HR-TB 39 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 116 Other
lineage Counts
lineage Count
La1.7.1 2
lineage4.4.1.1 7
lineage4 72
lineage4.9 134
lineage2.2.1 34
53
lineage4;lineage2.2 1
lineage3.1.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 6
lineage4.2.1 4
lineage3.1.1 7
lineage4.1.2 7
lineage1.2.1.1 1
lineage4.8 13
lineage2.1 4
lineage3.1.2.1 2
lineage4.1 2
lineage3 24
lineage2.2 3
lineage3.1 1
lineage4.1.2.1 10
lineage4.6.1.2 1
lineage4.6.2.2 3
lineage1.1.1 1
lineage1 2
lineage3.1.3 1
lineage6 1
lineage4.1.1.2 1
lineage4.1.1 1
lineage4.1.1.3.1 2
lineage4.8.2 1
lineage1.2.1.2.1 1
lineage4.3.4.2 2
lineage1.1.3.1 4
lineage1.1.2 2
lineage4.7 3
lineage4.9;lineage2.1 1
lineage1.2.2.2 1
lineage4.1.3 1
lineage4.3.3 4
lineage4.2.2.2 1
lineage4.3.1 1
lineage4.3.1.1 1
lineage2.2.1.1 1
lineage4.1.1.3 2
La1.8.1 10
lineage5.1.1 1
lineage4.4.2 1
lineage4.3.2.1 2
lineage4.4.1.2 3
lineage2.2.2 1
La1 2
lineage4;lineage3.1 1
La1.2 2
La1.3 1
lineage4.9;La1.3 1
lineage4.5;lineage2.2.1 1
lineage4.3.4 1
lineage6.1.3 1
La2 1
La1.4 1
lineage4.4 1
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 460
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21469202 Other La1.7.1 None
SRR21469201 Other La1.7.1 None
SRR2101471 RR-TB lineage4.4.1.1 None
SRR21677887 HR-TB lineage4 None
SRR8692807 Other lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR8692825 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
ERR176778 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR176779 HR-TB None
ERR4815310 Other None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR4815394 RR-TB lineage4.2.1 None
ERR4814470 Other lineage3.1.1 None
ERR4814496 RR-TB lineage4.1.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR4814623 Other lineage4.8 None
ERR702405 Sensitive lineage2.1 None
ERR1750944 Other lineage4.1.2 za
ERR4814748 Other lineage4.8 None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815550 Other lineage4 None
ERR181887 HR-TB None
ERR4814841 Other lineage4.1 None
ERR4814878 Sensitive lineage4.8 None
ERR176651 HR-TB None
ERR4815556 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817464 Other lineage3.1.1 None
ERR4815079 RR-TB lineage3 None
ERR190388 Sensitive lineage4.9 None
ERR4815901 Other lineage2.2 None
ERR4815909 Other lineage4.8 None
ERR2027290 RR-TB lineage3.1 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR4815994 Other lineage3 gb
ERR4816322 Other lineage4.9 None
ERR4816310 HR-TB lineage4.6.1.2 None
SRR3675552 RR-TB lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
ERR4816300 Other lineage4.1.2.1 None
ERR212125 HR-TB lineage4 None
ERR4817069 RR-TB None
ERR2446509 Other lineage3 nl
ERR4816462 Other lineage4.1.2.1 None
ERR4816464 Other lineage3 None
ERR4817131 Pre-XDR-TB None
ERR212138 HR-TB lineage4 None
ERR4816531 Other lineage4.1.2 None
ERR4816511 Other lineage3 gb
ERR4816702 RR-TB lineage4.6.2.2 None
SRR5341384 Sensitive lineage4.9 None
ERR4816604 RR-TB lineage4.1.2 None
ERR2229442 HR-TB lineage4.8 None
ERR4816756 RR-TB None
ERR4816852 Other lineage4.9 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4817703 Other lineage1.1.1 None
ERR4818988 Other lineage1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4819017 RR-TB lineage3 None
ERR4818787 MDR-TB lineage6 None
ERR4818126 RR-TB lineage1 None
ERR4818110 Sensitive lineage4.9 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819051 Other lineage4 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818393 RR-TB lineage3 None
SRR5007165 MDR-TB lineage3 None
ERR2509886 RR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
ERR4817584 MDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5341453 Sensitive None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
SRR5341375 Other lineage4.9 None
ERR2515352 Sensitive lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4819096 Other lineage4.4.1.1 None
SRR5341373 HR-TB lineage4 None
ERR4820723 RR-TB lineage4.4.1.1 None
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
SRR5341396 Other lineage4 None
ERR4819305 RR-TB lineage4.9 None
ERR4819307 RR-TB lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR2514137 Pre-XDR-TB lineage2.2.1 None
ERR4820324 Other lineage4 None
ERR4819528 RR-TB lineage3 None
ERR4820746 RR-TB lineage3 None
ERR4820394 Other lineage4.3.4.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR5341432 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819772 RR-TB lineage1.1.3.1 None
SRR5341298 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR4820833 HR-TB None
SRR5341308 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR2514834 Other lineage4.7 None
SRR5341313 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820151 RR-TB lineage4.8 None
ERR4820161 Other lineage3 None
SRR5341469 Other lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
ERR4821799 Other lineage2.2.1 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821057 HR-TB lineage4 None
ERR4821007 RR-TB lineage1.2.2.2 None
SRR6046210 Other lineage4 None
ERR4821550 Other lineage2.2.1 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
SRR6045516 Other lineage3.1.1 None
ERR4821214 RR-TB None
ERR4821334 RR-TB lineage4.1.3 None
ERR4822104 RR-TB lineage3 None
ERR4821572 Other lineage2.1 None
SRR6044780 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR4821679 Other lineage4.3.3 None
ERR4821712 HR-TB None
SRR5818624 Sensitive lineage3 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044983 Other lineage3.1.1 None
SRR6044936 Other lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045384 Other lineage4.1.2 None
SRR6045158 Other lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6046376 Other lineage3 None
SRR6046815 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
ERR4829039 RR-TB lineage4.3.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4829835 HR-TB lineage4.8 it
SRR6046616 Other lineage4.3.1.1 None
SRR6046659 Pre-XDR-TB lineage2.2.1 None
SRR6046834 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
SRR6511621 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR4831546 HR-TB lineage2.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6789628 HR-TB lineage4.9 None
SRR6789624 MDR-TB lineage4.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6982141 RR-TB lineage4.3.3 None
SRR7535082 Sensitive lineage4 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6832644 Other lineage4.3.3 None
ERR502510 Sensitive lineage4 None
ERR5311087 Other La1.8.1 None
SRR9970980 Other lineage4.1.2 None
ERR502517 MDR-TB lineage5.1.1 None
ERR3275190 Other lineage3 nl
ERR5311077 RR-TB La1.8.1 None
ERR5311084 Other La1.8.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971122 MDR-TB lineage4.8 None
SRR9971112 Other lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323045 HR-TB None
ERR323061 Sensitive lineage4.9 None
ERR036207 Other lineage4.9 None
ERR323066 Sensitive lineage4 None
DRR213597 MDR-TB lineage2.2.2 None
ERR323085 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR1023525 HR-TB lineage4 None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063858 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR1063896 Sensitive None
ERR10762275 MDR-TB lineage4.2.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283006 RR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283028 Other None
ERR3283025 HR-TB None
ERR3283047 HR-TB None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3468609 Other La1.8.1 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3468644 HR-TB La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797067 Other La1.8.1 None
ERR3797074 Sensitive lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797064 Sensitive None
ERR473332 Other lineage4 None
ERR3797087 Sensitive lineage4 None
ERR4596910 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400350 Sensitive lineage4.9 None
ERR4024991 Other None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769418 Other La1.2 None
ERR4769482 Sensitive La1 None
ERR4769421 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4797264 Sensitive None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796929 Sensitive lineage4 None
ERR4798099 Other None
ERR4797474 Other None
ERR6358979 Other None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR6866807 HR-TB lineage4 None
ERR6866639 Other None
ERR736875 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR751317 Sensitive lineage4.9 None
ERR751326 Sensitive lineage4 None
ERR9285979 RR-TB lineage3.1.1 None
ERR8975534 Sensitive lineage4.3.4.2.1 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR9119669 HR-TB None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9787256 Other lineage6.1.3 None
SRR10315567 Other lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1173310 MDR-TB None
SRR10869071 MDR-TB lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1173777 Other lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173385 Sensitive lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173740 Other None
SRR11972367 Sensitive lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1184308 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR13861138 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR13861140 MDR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13861149 RR-TB lineage4.9 None
SRR13861154 RR-TB lineage4.9 None
SRR13861152 Sensitive lineage4.9 None
SRR13861170 RR-TB lineage4.9 None
SRR13861186 Other lineage4.9 None
SRR13861169 RR-TB lineage4.9 None
SRR13861197 RR-TB lineage4.9 None
SRR13861202 RR-TB lineage4.9 None
SRR13861200 Other lineage4.9 None
SRR13861199 RR-TB lineage4.9 None
SRR13861216 RR-TB lineage4.9 None
SRR13861233 RR-TB lineage4.9 None
SRR13861218 RR-TB lineage4.9 None
SRR13861222 RR-TB lineage4.9 None
SRR13861232 RR-TB lineage4.9 None
SRR13861245 RR-TB lineage4.9 None
SRR13861262 RR-TB lineage4.9 None
SRR13861276 RR-TB lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13861277 RR-TB lineage4.9 None
SRR13861267 Other lineage4.9 None
SRR13861284 RR-TB lineage4.9 None
SRR13861282 RR-TB lineage4.9 None
SRR13861281 Other lineage4.9 None
SRR13861292 RR-TB lineage4.9 None
SRR13861320 RR-TB lineage4.9 None
SRR13861316 RR-TB lineage4.9 None
SRR13861310 RR-TB lineage4.9 None
SRR13861357 RR-TB lineage4.9 None
SRR13861338 Sensitive lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR13861321 RR-TB lineage4.9 None
SRR13861337 RR-TB lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR13861385 Sensitive lineage4.9 None
SRR13861375 Other lineage4.9 None
SRR13861389 Other lineage4.9 None
SRR13861408 MDR-TB lineage4.9 None
SRR13861393 Sensitive lineage4.9 None
SRR13861406 MDR-TB lineage4.9 None
SRR13861481 RR-TB lineage4.9 None
SRR13861450 RR-TB lineage4.9 None
SRR13861474 Sensitive lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861443 RR-TB lineage4.9 None
SRR13861444 Sensitive lineage4.9 None
SRR13861451 RR-TB lineage4.9 None
SRR13861458 MDR-TB lineage4.9 None
SRR13861463 Other lineage4.9 None
SRR13861486 Other lineage4.9 None
SRR13861503 Other lineage4.9 None
SRR13861484 RR-TB lineage4.9 None
SRR13861495 MDR-TB lineage4.9 None
SRR13861488 RR-TB lineage4.9 None
SRR13861494 Other lineage4.9 None
SRR13861501 RR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861520 RR-TB lineage4.9 None
SRR13861513 RR-TB lineage4.9 None
SRR13861547 RR-TB lineage4.9 None
SRR13861524 RR-TB lineage4.9 None
SRR13861543 RR-TB lineage4.9 None
SRR13861631 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861561 RR-TB lineage4.9 None
SRR13861570 Other lineage4.9 None
SRR13861618 RR-TB lineage4.9 None
SRR13861563 RR-TB lineage4.9 None
SRR13861560 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861585 RR-TB lineage4.9 None
SRR13861590 RR-TB lineage4.9 None
SRR13861603 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861632 MDR-TB lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR13861650 Sensitive lineage4.9 None
SRR13861662 RR-TB lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR13861701 RR-TB lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR13861722 RR-TB lineage4.9 None
SRR13861730 Sensitive lineage4.9 None
SRR13861736 RR-TB lineage4.9 None
SRR13861729 RR-TB lineage4.9 None
SRR13861737 RR-TB lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR16156832 RR-TB None
SRR1735596 RR-TB lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR17567930 Other lineage4.4.1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19303788 Sensitive lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1791747 Other La1.8.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18511647 Sensitive lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None