EBG00000313339 - n.1133C>T
Drug resistance types
246 Sensitive
11 RR-TB
23 HR-TB
56 MDR-TB
37 Pre-XDR-TB
2 XDR-TB
308 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.3 | 8 |
| lineage4.9 | 275 |
| lineage4.3.4.2.1 | 21 |
| lineage4.3.2.1 | 11 |
| lineage4.1.2 | 11 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.2 | 17 |
| lineage4.1.1.3 | 11 |
| lineage4.1.1.2 | 1 |
| lineage4.8 | 14 |
| La1.2.BCG | 6 |
| lineage2.2.1 | 66 |
| La1.2.BCG;lineage4.9 | 4 |
| La1.7.1 | 5 |
| La1.8.1 | 36 |
| lineage4.3.3 | 9 |
| 2 | |
| lineage4.2.2 | 6 |
| lineage1.2.2.2 | 7 |
| lineage1.1.2 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage3.1.1 | 9 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.1 | 7 |
| lineage4.2.2.2 | 6 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2.1 | 15 |
| lineage4.6.2.2 | 5 |
| lineage2.2.1.1 | 6 |
| lineage1.1.2;lineage4 | 1 |
| lineage1.1.1 | 3 |
| lineage6.2.3 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.2.1 | 4 |
| lineage5.1.1 | 5 |
| lineage3 | 11 |
| lineage4 | 5 |
| lineage4.6.1.2 | 3 |
| lineage2.2.2;lineage4 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.1 | 4 |
| lineage5.1.4 | 1 |
| lineage4.3.4.1 | 10 |
| lineage2;lineage4 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage1.1.3.2 | 7 |
| lineage3.1.2.1 | 1 |
| lineage1.2.2.1;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.3.2 | 4 |
| lineage1.2.2.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.2 | 2 |
| La1.6 | 1 |
| La1.8.1;lineage4 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.5 | 2 |
| lineage6.3.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.7 | 2 |
| lineage5.1.2 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 3 |
| La1.8.1;lineage4.9 | 1 |
| La1.2 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 683 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769479 | Other | La1.3 | None | SRR1180073 | Other | lineage4.9 | None | ERR1063853 | Sensitive | lineage4.3.4.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180617 | Other | lineage4.9 | None | SRR1183255 | Other | lineage4.9 | None | SRR1183538 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180624 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1184329 | Other | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR1180087 | Other | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR1180456 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1180213 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR1180125 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR1183354 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1180580 | Other | lineage4.9 | None | SRR1181372 | Other | lineage4.9 | None | SRR1183128 | Other | lineage4.9 | None | SRR1183282 | Other | lineage4.9 | None | SRR1183698 | Other | lineage4.9 | None | SRR1183518 | Other | lineage4.9 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | SRR21469202 | Other | La1.7.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR1181386 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1165243 | Pre-XDR-TB | lineage2.2.2 | None | SRR10482948 | Other | La1.8.1 | None | ERR4769462 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | SRR1181229 | Other | lineage4.9 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR1183360 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR1180081 | Other | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | SRR1180154 | Other | lineage4.9 | None | SRR1181358 | Other | lineage4.9 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR144568 | Sensitive | None | SRR5067459 | HR-TB | lineage4.2.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1180782 | Other | lineage4.9 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR1183349 | Other | lineage4.9 | None | SRR1183432 | Other | lineage4.9 | None | SRR1181176 | Other | lineage4.9 | None | SRR1183214 | Other | lineage4.9 | None | SRR1183306 | Other | lineage4.9 | None | SRR1183375 | Other | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | ERR4187645 | Sensitive | La1.8.1 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1180048 | Other | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR4188010 | Other | La1.8.1 | None | SRR1011490 | Sensitive | lineage4.1.2 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1180666 | Other | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR1180209 | Other | lineage4.9 | None | SRR1183621 | Other | lineage4.9 | None | SRR1183674 | Other | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | SRR11972438 | Sensitive | lineage1.1.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR1183414 | Other | lineage4.9 | None | SRR1183619 | Other | lineage4.9 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR1792232 | Other | La1.7.1 | None | SRR1180228 | Other | lineage4.9 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR1183185 | Other | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183168 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR161022 | Sensitive | lineage4.3.4.2.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183133 | Other | lineage4.9 | None | SRR1183383 | Other | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183180 | Other | lineage4.9 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1181224 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR18149443 | Sensitive | lineage3 | None | SRR1180597 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR1180114 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR2179857 | Sensitive | lineage4 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR1183069 | Other | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | SRR1180750 | Other | lineage4.9 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR3797007 | Other | La1.8.1 | None | SRR17856664 | Sensitive | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR1180612 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR10614047 | Sensitive | lineage4.9 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | SRR1183290 | Other | lineage4.9 | None | ERR4188160 | Other | La1.8.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | SRR1183126 | Other | lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1208645 | Sensitive | lineage4.9 | None | SRR1183093 | Other | lineage4.9 | None | SRR1182909 | Other | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | SRR1183412 | Other | lineage4.9 | None | ERR751729 | Other | lineage1.1.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180669 | Other | lineage4.9 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | SRR1792012 | Other | La1.8.1 | None | ERR502480 | Other | lineage5.1.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR5311076 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR1180696 | Other | lineage4.9 | None | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183288 | Other | lineage4.9 | None | SRR1180046 | Other | lineage4.9 | None | SRR1183076 | Other | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR5162118 | Other | La1.8.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR4188187 | Sensitive | La1.8.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR212100 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR212162 | Sensitive | lineage4.3.4.2.1 | None | ERR4187800 | Sensitive | La1.8.1 | None | SRR1180105 | Other | lineage4.9 | None | SRR1183188 | Other | lineage4.9 | None | SRR1183192 | Other | lineage4.9 | None | SRR1183334 | Other | lineage4.9 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR1183402 | Other | lineage4.9 | None | SRR1183479 | Other | lineage4.9 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR1183277 | Other | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR10482944 | Other | La1.8.1 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1167291 | Pre-XDR-TB | lineage2.2.2 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7069158 | Other | lineage3 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR1183031 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR216929 | Sensitive | lineage4.3.4.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR212011 | Sensitive | lineage4.1.1.3 | mw | SAMN02350448 | Sensitive | lineage4.1.2 | za | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1180482 | Other | lineage4.9 | None | SRR1180158 | Other | lineage4.9 | None | SRR1183726 | Sensitive | lineage4.9 | None | SRR1183524 | Other | lineage4.9 | None | SRR1183613 | Other | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR1182901 | Other | lineage4.9 | None | SRR1183068 | Other | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183225 | Other | lineage4.9 | None | SRR6045138 | Other | lineage3.1.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR1180579 | Other | lineage4.9 | None | ERR4188253 | Other | La1.8.1 | None | SRR1180094 | Other | lineage4.9 | None | SRR1180197 | Other | lineage4.9 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SRR1792247 | Other | La1.7.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | ERR3273119 | MDR-TB | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR7236369 | Other | La1.8.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1183430 | Other | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | SRR1915490 | Other | La1.2.BCG | None | SRR1182923 | Other | lineage4.9 | None | SRR1182929 | Other | lineage4.9 | None | SRR1183321 | Other | lineage4.9 | None | ERR4769428 | Sensitive | La1.3 | None | SRR21469200 | Other | La1.7.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR17832798 | Sensitive | lineage3 | None | SRR1180830 | Other | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR1915486 | HR-TB | La1.2.BCG | None | SRR1180241 | Other | lineage4.9 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR4188395 | Sensitive | La1.8.1 | None | DRR184982 | Other | lineage2.2.1 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR216902 | Sensitive | lineage1.1.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR1208464 | Other | lineage4.9 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR161125 | Sensitive | lineage4 | None | ERR4769482 | Sensitive | lineage4.9 | None | ERR4627392 | Other | La1.8.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR1180774 | Other | lineage4.9 | None | SRR7755767 | Sensitive | lineage4.3.3 | None | SRR1181267 | Other | lineage4.9 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR1183122 | Other | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | SRR6982196 | Sensitive | None | SRR4033203 | Sensitive | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR1183461 | Other | lineage4.9 | None | SRR1183098 | Other | lineage4.9 | None | SRR7240350 | Other | La1.8.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR4769527 | Sensitive | lineage4.9 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1181392 | Other | lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | SRR1183495 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1183019 | Other | lineage4.9 | None | SRR1183601 | Other | lineage4.9 | None | SRR1183669 | Other | lineage4.9 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR1181422 | Other | lineage4.9 | None | SRR1180196 | Other | lineage4.9 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SRR1183439 | Other | lineage4.9 | None | SRR5341254 | Other | lineage4.2.2.2 | in | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR4192392 | Other | lineage6.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1183472 | Other | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR5865338 | MDR-TB | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR1173450 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR2100532 | Sensitive | lineage3 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR4769555 | Sensitive | La1.3 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1182928 | Other | lineage4.9 | None | SRR1183132 | Other | lineage4.9 | None | SRR1180455 | Other | lineage4.9 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR10993936 | Other | La1.6 | None | SRR1180495 | Other | lineage4.9 | None | SRR1180667 | Other | lineage4.9 | None | SRR1183121 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR1180052 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR1049031 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1180813 | Other | lineage4.9 | None | SRR1181277 | Other | lineage4.9 | None | SRR1183385 | Other | lineage4.9 | None | SRR1183511 | Other | lineage4.9 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR228175 | Sensitive | lineage3 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | SRR1175474 | Other | lineage4.9 | None | SRR1180025 | Other | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR1183297 | Other | lineage4.9 | None | SRR1183394 | Other | lineage4.9 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181231 | Other | lineage4.9 | None | SRR1180829 | Other | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR1180486 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR1183314 | Other | lineage4.9 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR1180062 | Other | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | SRR1181233 | Other | lineage4.9 | None | ERR3797013 | Other | La1.8.1 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183057 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR1049030 | Sensitive | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR1202713 | Sensitive | lineage4.9 | None | ERR4188021 | Other | La1.8.1 | None | SRR1183307 | Other | lineage4.9 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | SRR1183680 | Other | lineage4.9 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1183502 | Other | lineage4.9 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR1183304 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR4821372 | Other | lineage4.1.2.1 | None | SRR1182925 | Other | lineage4.9 | None | SRR1183305 | Other | lineage4.9 | None | SRR1180240 | Other | lineage4.9 | None | SRR1180599 | Other | lineage4.9 | None | SRR1180738 | Other | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR1183302 | Other | lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183418 | Other | lineage4.9 | None | SRR1183702 | Other | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR176619 | Sensitive | lineage4.9 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR1915483 | HR-TB | La1.2.BCG | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR1183097 | Other | lineage4.9 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR1183452 | Other | lineage4.9 | None | SRR1183517 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1180115 | Other | lineage4.9 | None | SRR1180123 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SAMN02403471 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1180111 | Other | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | ERR4769549 | Sensitive | lineage4.9 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR1182880 | Other | lineage4.9 | None | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR1181268 | Other | lineage4.9 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR2693240 | Other | La1.8.1 | None | SRR8346061 | RR-TB | lineage2.2.1 | None | ERR5311086 | Sensitive | lineage4.9 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR1182878 | Other | lineage4.9 | None | ERR4188213 | Other | La1.8.1 | None | SRR1180128 | Other | lineage4.9 | None | SRR1181193 | Other | lineage4.9 | None | SRR1180525 | Other | lineage4.9 | None | SRR1183285 | Other | lineage4.9 | None | SRR1183149 | Other | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR3743477 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SRR21764250 | Other | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR1180751 | Other | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR1183322 | Other | lineage4.9 | None | SRR1182951 | Other | lineage4.9 | None | SRR1183050 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR1181377 | Other | lineage4.9 | None | SRR1180192 | Other | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769552 | Sensitive | La1.3 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR1183523 | Other | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR15217980 | HR-TB | lineage4 | None | SRR1182883 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | SRR1173717 | MDR-TB | lineage4.6.1.1 | None | SRR1182908 | Other | lineage4.9 | None | SRR1183227 | Other | lineage4.9 | None | SRR1183445 | Other | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4188381 | Other | La1.8.1 | None | SRR1183061 | Other | lineage4.9 | None | SRR1183678 | Other | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1183327 | Other | lineage4.9 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR1180717 | Other | lineage4.9 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1183710 | Other | lineage4.9 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR1183315 | Other | lineage4.9 | None | SRR1182882 | Other | lineage4.9 | None | SRR1183240 | Other | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR5007155 | Sensitive | lineage4.1.2.1 | None | SRR1183482 | Other | lineage4.9 | None | SRR1183500 | Other | lineage4.9 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR11465563 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR4772210 | Other | La1.2 | None | SRR1180061 | Other | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | SRR6046376 | Other | lineage3 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR1183224 | Other | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR1181281 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR1183175 | Other | lineage4.9 | None | SRR1183610 | Other | lineage4.9 | None | SRR1183720 | Other | lineage4.9 | None | SRR1180822 | Other | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR1183268 | Other | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR4187916 | Other | La1.8.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181236 | Other | lineage4.9 | None | SRR1183410 | Other | lineage4.9 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | SRR1183422 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR6045683 | Other | lineage3.1.2.1;lineage4 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR5311088 | Sensitive | La1.8.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | SRR1182920 | Other | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR1180801 | Other | lineage4.9 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR987719 | HR-TB | lineage3 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR1183453 | Other | lineage4.9 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR1180559 | Other | lineage4.9 | None | SRR1180743 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR1180702 | Other | lineage4.9 | None | SRR1181223 | Other | lineage4.9 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR502494 | Other | lineage5.1.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | ERR1034687 | Sensitive | lineage3 | None | SRR1183067 | Other | lineage4.9 | None | SRR1183712 | Other | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR323116 | Sensitive | lineage4.3.4.2.1 | None | SRR1183616 | Other | lineage4.9 | None | SRR1180080 | Other | lineage4.9 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR1182885 | Other | lineage4.9 | None | SRR1183435 | Other | lineage4.9 | None | SRR1183716 | Other | lineage4.9 | None | SRR22175227 | HR-TB | lineage3 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR1182876 | Other | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1180555 | Other | lineage4.9 | None | ERR1873406 | Sensitive | lineage2;lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR1183548 | Other | lineage4.9 | None | SRR1180668 | Other | lineage4.9 | None |
|---|
