EBG00000313339 - n.2430C>T
Drug resistance types
10 Sensitive
13 RR-TB
15 HR-TB
8 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.4 | 1 |
| lineage4.3.3 | 2 |
| La1.7.1 | 3 |
| La1.8.1 | 3 |
| lineage4.8 | 16 |
| lineage2.2.1 | 13 |
| lineage4.9 | 22 |
| lineage2.1;lineage4.9 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage3 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage1.1.1 | 1 |
| La1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR21469202 | Other | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR978752 | Other | lineage4.8 | None | ERR867569 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4811708 | HR-TB | lineage4 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675582 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978747 | Other | lineage4.8 | None | SRR1184329 | Other | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR9588603 | Sensitive | lineage4.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3275190 | Other | lineage3 | nl | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR387051 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769495 | Other | La1.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR11462861 | Other | La1.8.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR978756 | Other | lineage4.8 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR978762 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None |
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