EBG00000313339 - n.2430C>T
Drug resistance types
16 Sensitive
13 RR-TB
17 HR-TB
14 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| 8 | |
| lineage3 | 8 |
| lineage4.8 | 5 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4 | 12 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 11 |
| lineage1.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9 | 14 |
| lineage4.3.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.8.1 | 5 |
| La1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage3.1.3 | 2 |
| La1.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 2 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675555 | HR-TB | None | ERR2446509 | Other | lineage3 | nl | ERR212121 | HR-TB | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817109 | Other | lineage3 | None | ERR4817434 | Other | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2512599 | Other | lineage3 | gb | ERR2503438 | Sensitive | lineage4.1.2.1 | fi | ERR4818561 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4820130 | Other | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4821028 | Sensitive | lineage3.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045233 | HR-TB | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR9588603 | Sensitive | lineage4.1.2 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR067712 | HR-TB | lineage4 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439415 | Other | La1.8.1 | None | ERR387051 | HR-TB | None | ERR4769419 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4797590 | Sensitive | lineage3 | in | ERR4769495 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1173450 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR1187598 | Sensitive | lineage4.1.2 | ca | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199485 | Other | lineage2 | None | SRR1791961 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21677870 | Sensitive | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815341 | Other | lineage3.1.2.1 | gb | SRR21677886 | Sensitive | lineage4.9 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424836 | RR-TB | lineage3.1.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR1750908 | Sensitive | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR1750943 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR176751 | HR-TB | None | ERR2027257 | Other | lineage4.1.2.1 | None |
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