EBG00000313325 - n.1252G>A
Drug resistance types
33 Sensitive
13 RR-TB
15 HR-TB
24 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 4 |
| lineage4.2.2.2 | 5 |
| lineage1.1.3.2 | 2 |
| lineage3 | 1 |
| lineage4 | 4 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.9 | 16 |
| lineage2.2.1 | 25 |
| lineage4.3.3 | 4 |
| La1.8.1 | 11 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.1.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage6.3.1 | 2 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.1 | 6 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage1.2.2.1 | 2 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.8 | 1 |
| La1.7.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| 2 | |
| lineage2.2 | 3 |
| lineage4.6.4 | 1 |
| lineage4.4.2 | 2 |
| lineage4.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR4821276 | Other | lineage3 | None | ERR4829336 | Other | lineage4 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6896576 | Other | lineage2.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6046541 | Other | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087486 | Other | La1.8.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR5087500 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR4025018 | Other | lineage4.1.2.1 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4188403 | Other | La1.8.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6865587 | Other | lineage4.1.2.1 | None | ERR181864 | Sensitive | lineage3.1.1 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR161033 | HR-TB | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824680 | RR-TB | lineage2.2.1 | cn | SRR6824298 | Sensitive | lineage4.4.2 | cn | SRR6824678 | RR-TB | lineage4.2.2 | cn | SRR6824684 | MDR-TB | lineage2.2.1 | cn | SRR6824328 | MDR-TB | lineage4.5 | cn | SRR6824683 | MDR-TB | lineage4.4.2 | cn | ERR171135 | Other | lineage2.2.1 | za | ERR1750938 | Other | lineage4.4.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750907 | RR-TB | None | ERR181905 | Sensitive | lineage2.2.1 | mw | ERR212042 | HR-TB | lineage3.1.1 | None | ERR164021 | MDR-TB | lineage4.3.4.2.1;lineage1.2.2.2 | mw | SRR4034223 | HR-TB | lineage4.3.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR4033523 | Other | lineage2.2 | None | ERR2513054 | Other | lineage4.2.2.2 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR2514822 | Sensitive | lineage4.1.1.3.1 | None | ERR4819575 | Sensitive | lineage4 | None |
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