EBG00000313339 - n.2652G>C


Drug resistance types
68 Sensitive 44 RR-TB 34 HR-TB 34 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 110 Other
lineage Counts
lineage Count
lineage4.3.3;lineage4.8 3
La1.6 1
lineage4.9 93
lineage2.2.1 40
lineage4.1.2.1 8
lineage4.8 46
lineage4.4.1.1.1 2
lineage2.2.2 6
La1.3 7
lineage6.1.3 2
lineage4.4.2 4
lineage4.1.1.3 7
lineage3.1.3 1
lineage4.3.2.1 3
lineage4.1.1.2 1
lineage4.3.4.2.1 4
lineage4.4.1.1 4
La1.8.1 13
lineage2.2.1.1 2
La1;lineage4.9 1
lineage3 8
lineage4.2.1 3
lineage4.3.3 7
lineage1.1.1.1 1
lineage3.1.1 4
lineage2.2.1;lineage4.9 3
lineage2.2.1;lineage4 2
lineage4.8.1 2
lineage4.3.4.1 4
lineage4.1.2;lineage4.9 1
lineage4.1.2 1
lineage2.2;lineage4.9 1
lineage4.1.1.1 2
lineage4.3;lineage4.9 1
lineage4.3.2 1
lineage1.1.1 2
La1.7.X-unk4 1
lineage1.1.2;lineage6.2.3 1
lineage4.9.1 1
lineage4.2.1.1 1
lineage2;lineage4 1
La1.7.1 2
lineage4.2.2.2 1
lineage6.3.1 1
lineage4.7 2
lineage4.2.2 1
lineage4 4
lineage1.2.2.2 1
lineage2;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 310
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867566 Other lineage4.9 None
ERR4815783 Other lineage4.1.2.1 gb
ERR9786276 Sensitive lineage4.8 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4769408 Other La1.3 None
ERR9787336 RR-TB lineage6.1.3 None
SRR15316595 RR-TB lineage4.4.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4816322 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR10762291 MDR-TB lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR8975044 Other lineage4.1.1.2 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR978762 Other lineage4.8 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
SRR6045002 RR-TB lineage4.9 None
ERR5087596 Other La1.8.1 None
ERR6359066 HR-TB lineage4.9 None
ERR5087846 Other La1.8.1 None
ERR978727 Other lineage4.8 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR911930 Other lineage4.8 None
SRR18002981 Other lineage2.2.1 None
SRR11972300 MDR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR19325518 MDR-TB lineage2.2.1 None
ERR3275190 Other lineage3 nl
ERR10796596 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4769404 Other La1.3 None
SRR1183054 Sensitive lineage4.9 None
SRR1792024 Other La1.8.1 None
ERR323037 Other lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR18912069 Other lineage4.1.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR7236399 Other La1.8.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
DRR185000 Other lineage1.1.1.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156775 Other lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR1180391 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1196478 Other lineage4.9 None
SRR1792012 Other La1.8.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR978754 RR-TB lineage4.8 None
ERR473334 HR-TB lineage4.9 None
ERR978760 RR-TB lineage4.8 None
SAMEA3501052 RR-TB lineage4.8 None
SRR28351408 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR22424765 HR-TB lineage4.8 None
ERR2514215 Other lineage2.2.1 gb
SRR1180406 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR978733 RR-TB lineage4.8 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR978755 RR-TB lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR4819357 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR978756 Other lineage4.8 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
ERR3283033 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR7617847 Other La1.8.1 None
SRR1181402 Sensitive lineage4.9 None
ERR3806588 Other lineage6.1.3 None
SRR6046141 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR978757 RR-TB lineage4.8 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1184021 Sensitive lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
ERR067712 Sensitive lineage4.9 None
ERR4817434 Other lineage3 None
ERR2446509 Other lineage3 nl
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR20969542 Other lineage4.4.2 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4820723 Other lineage4.4.1.1 None
ERR10796591 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SAMEA3450033 Other lineage4.8 None
ERR4812763 Other lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR3276144 Other lineage3 nl
ERR4813767 Sensitive lineage4.3.2 None
ERR4769436 Other La1.3 None
SRR1180250 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR736831 Other lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
ERR2851356 Sensitive lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR4769516 Sensitive lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR978752 Other lineage4.8 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
ERR911929 Other lineage4.8 None
SRR12708392 Other lineage2.2.1 None
ERR978734 RR-TB lineage4.8 None
SRR7131195 Other lineage2.2.1 None
ERR11465189 RR-TB lineage4.9.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR14801720 Other lineage4.8 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR12708419 Other lineage4.3.3 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR21469202 Other La1.7.1 None
ERR978761 Other lineage4.8 None
ERR4769442 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
SRR10315558 RR-TB lineage2.2.1 None
SRR1181368 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR978694 Other lineage4.8 None
SRR7069931 Other lineage4.2.2.2 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR18002974 Other lineage2.2.1 None
DRR184903 Sensitive lineage2.2.2 None
ERR978747 Other lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR6045832 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR1173385 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR978726 RR-TB lineage4.8 None
ERR4812495 Other lineage4.1.2.1 pe
SAMEA3501015 Other lineage4.8 None
ERR8774355 MDR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
ERR176741 Other lineage4.9 None
ERR502523 Other lineage6.3.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR3439489 RR-TB La1.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR10796634 Other lineage4.7 None
ERR216965 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
DRR188816 Other lineage4.2.2 None
SRR5163959 Other lineage4.9 None
ERR978735 Other lineage4.8 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4769439 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4811708 HR-TB lineage4 None
ERR4769514 Other La1.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4798823 HR-TB lineage4 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
ERR4812328 Other lineage4.3.3 pe
SRR1181283 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR21469200 Other La1.7.1 None
SRR6855695 Sensitive lineage4.8 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR1172807 Sensitive lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR1175474 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR978693 Other lineage4.8 None
SRR1792025 Other La1.8.1 None
ERR485006 HR-TB lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4814976 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR9971112 HR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
ERR3468488 Other La1.8.1 None
ERR4819546 HR-TB lineage3 None
ERR4769444 HR-TB lineage4.9 None
ERR4811101 Other lineage4.4.2 None
SRR7236330 Other La1.8.1 None
SRR1180444 Sensitive lineage4.9 None
ERR10796597 Other lineage4.3.3 None
ERR2886463 Sensitive lineage2.2.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR13423546 Other lineage4.4.2 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR473323 HR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR473303 Sensitive lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SAMEA3501046 RR-TB lineage4.8 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1792022 Other La1.8.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None