EBG00000313339 - n.2652G>C


Drug resistance types
96 Sensitive 48 RR-TB 32 HR-TB 42 MDR-TB 27 Pre-XDR-TB 1 XDR-TB 139 Other
lineage Counts
lineage Count
lineage2.2.1 46
La1.8.1 12
lineage2.2.2 5
lineage2.2.1.1 4
lineage4.1.1.3 9
lineage3.1.3 1
lineage4.1.2.1 16
lineage4.8 27
lineage4.6.2.2 2
La1.7.1 3
lineage3 25
lineage4.4.2 5
lineage4.3.3 11
lineage4.9 103
lineage1.1.2 3
lineage4 22
6
lineage4.3.2 3
lineage2.2 3
lineage4.4.1.1 8
lineage4.3.4.2.1 7
lineage4.1.1.2 2
lineage4.4.1.1.1 3
lineage4.3.2.1 2
lineage4.4.1 1
lineage4.1.2 2
lineage4;lineage2 1
lineage1.1.1 2
lineage1.1.3.1 1
lineage4.3.1.1 1
lineage4.2.1 3
lineage4.1.1.3.1 1
lineage2.1 1
lineage4.2.1.1 1
lineage4.1 1
lineage4.3.4.1 2
lineage4.2.2 2
lineage5.1.4 1
lineage6.3.1 1
lineage4.3.1 1
lineage4.7 2
lineage4.8.1 1
lineage1.1.1.1 1
lineage4.1.1 1
lineage6.2.3;lineage1.1.2 1
La1.7.X-unk4 1
lineage3.1.1 4
lineage6 2
La1.3 9
lineage4.9;La1.3 4
lineage4.5;lineage2.2.1 1
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.9;lineage2.2 1
lineage2 1
spoligotype Counts
spoligotype Count
None 385
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002888 RR-TB lineage2.2.1 None
SRR1792011 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR1792012 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18002949 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18912069 Other lineage4.1.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR19303773 Other lineage4.6.2.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR21469201 Other La1.7.1 None
SRR2100532 Sensitive lineage3 None
SRR20969542 Other lineage4.4.2 None
SRR2100067 Other lineage4.3.3 None
SRR2100537 Sensitive lineage3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR21469202 Other La1.7.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21469200 Other La1.7.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR22175257 MDR-TB lineage2.2.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22424765 MDR-TB lineage4 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424787 Sensitive lineage4.9 None
ERR4815310 Other None
SAMEA3501065 RR-TB lineage4.8 None
ERR4813767 Sensitive lineage4.3.2 None
ERR4814639 HR-TB lineage4 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR1750907 RR-TB None
ERR4815783 Other lineage4.1.2.1 gb
ERR1750889 Other lineage4.4.1.1 None
ERR1750897 Sensitive lineage4.1.1.3 zw
ERR1750879 Sensitive lineage4.3.4.2.1 zw
ERR1750909 RR-TB lineage4.1.1.2 None
ERR4815471 Other lineage4.9 None
ERR4812771 RR-TB lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR1750880 MDR-TB lineage4.4.1.1.1 zw
ERR1750905 Sensitive lineage4.3.3 za
ERR1750928 Sensitive lineage4.3.2.1 za
ERR1750916 Other lineage2.2.1.1 None
ERR1750920 Sensitive lineage4.4.1.1 za
ERR1750943 Sensitive lineage4 None
ERR1750934 Sensitive lineage2.2.1 None
ERR1750923 Sensitive lineage4.8 za
ERR1750919 Sensitive lineage4.4.1.1 za
ERR1750938 Other lineage4.4.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR1750944 Other lineage4.1.2 za
ERR2229024 Sensitive lineage4 None
ERR4814903 Sensitive lineage4.3.2 gb
ERR4816964 Other lineage4.9 None
ERR4815550 Other lineage4 None
ERR4814976 Other lineage4.9 None
SAMEA3501015 Other lineage4.8 None
ERR2446509 Other lineage3 nl
ERR4817480 Sensitive lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR2229147 Other lineage4.8 None
ERR212114 Other lineage4.3.4.2.1 None
ERR4817204 RR-TB lineage4.9 None
ERR4816569 Other lineage4.3.3 gb
ERR4817131 Pre-XDR-TB None
ERR216965 HR-TB lineage4.9 None
ERR216978 Sensitive lineage4.3.4.2.1 None
ERR4816800 Other lineage4.8 gb
ERR4816755 Other lineage4.1.1.3 None
ERR4816762 Other lineage4;lineage2 None
ERR4816852 Other lineage4.9 None
ERR4817434 Other lineage3 None
ERR4816833 Other lineage4.1.1.3 None
ERR4815815 Sensitive lineage4 None
ERR4816868 Other lineage4.4.1.1 None
ERR4817306 Other lineage3 gb
ERR2228899 RR-TB lineage4.8 None
ERR2228900 RR-TB lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR228180 Sensitive lineage3 None
ERR228175 Sensitive lineage3 None
ERR4817948 Other lineage3 gb
ERR4817915 RR-TB lineage4.9 None
ERR4818072 Other lineage4.1.2.1 gb
ERR2510804 Other lineage2.2.1 None
SAMEA3450033 Other lineage4.8 None
ERR3276144 Other lineage3 nl
ERR4818151 Other lineage2.2.1 gb
ERR4819041 Sensitive lineage4.3.3 gb
ERR2432997 Other lineage4.8 None
ERR2512606 MDR-TB lineage3 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818261 Other lineage1.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818952 Other lineage3 None
ERR4818484 Sensitive lineage3 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4818561 HR-TB lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4817554 Other lineage1.1.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4817628 Sensitive lineage4.8 gb
ERR2513682 Sensitive lineage3 None
ERR2513910 Other lineage3 gb
SRR5153091 HR-TB lineage4.3.3 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4820290 Other lineage3 None
ERR4819314 Other lineage1.1.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4820736 Other lineage4.1.2.1 gb
ERR4819383 RR-TB lineage4.9 None
ERR4819357 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819533 Other lineage1.1.2 None
ERR4819546 HR-TB lineage3 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR1023509 Other None
SAMEA3501070 RR-TB lineage4.8 None
ERR4819933 Other lineage4.9 None
ERR4820130 Other lineage3 None
ERR2514926 Other lineage4.6.2.2 gb
ERR4822150 Other lineage4.8 gb
SAMEA3501052 RR-TB lineage4.8 None
SRR6045422 Other lineage4.3.1.1 None
SAMEA3501046 RR-TB lineage4.8 None
ERR2515230 Sensitive lineage4.8 None
ERR4821811 RR-TB lineage4.9 None
ERR4821102 Sensitive lineage2.2.1 gb
ERR4821477 Other lineage4.8 None
ERR4822133 MDR-TB lineage3 None
SRR6045664 Other lineage4.2.1 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR6045655 Other lineage4.1.1.3.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6046160 Sensitive lineage4.8 gb
SRR6046737 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046376 Other lineage3 None
ERR4829233 Other lineage2.2.1 None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR2886463 Sensitive lineage2.2.1 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR485006 HR-TB lineage4.9 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982192 Sensitive lineage4.1.1.3 None
SRR6789624 MDR-TB lineage4.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR6982246 Sensitive lineage4 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6824678 RR-TB lineage4.2.2 cn
ERR5087846 Other La1.8.1 None
SRR6855695 Sensitive lineage4.8 None
SRR6824331 MDR-TB lineage4.4.2 cn
ERR3170460 Sensitive lineage5.1.4 None
ERR502523 Other lineage6.3.1 None
ERR3275190 Other lineage3 nl
ERR5087486 Other La1.8.1 None
ERR5087596 Other La1.8.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131018 Sensitive lineage4.3.1 None
SRR7131125 Other lineage2.2.1 None
SRR7131258 Sensitive lineage4.4.1.1 None
SRR7131195 Other lineage2.2.1 None
SRR7496471 Sensitive None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR9738475 Sensitive lineage4.3.3 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
ERR10762291 MDR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR184903 Sensitive lineage2.2.2 None
DRR184982 RR-TB lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR036207 Other lineage4.9 None
ERR067712 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
DRR185000 Other lineage1.1.1.1 None
DRR185024 Other lineage2.2.2 None
ERR037234 Sensitive lineage4.9 None
ERR038289 Other lineage4.3.3 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796597 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796634 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR3439489 RR-TB La1.8.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3283033 Sensitive lineage4.9 None
ERR3439441 Other La1.8.1 None
ERR3468488 RR-TB La1.8.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR473323 HR-TB lineage4.9 None
ERR4596902 HR-TB lineage3 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR3806588 Other lineage6 None
ERR4187652 Other lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769404 Other La1.3 None
ERR4769436 Other La1.3 None
ERR4769406 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769495 Other La1.3 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769512 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769514 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769539 Sensitive lineage4.9 None
ERR4769551 Other La1.3 None
ERR4769553 RR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769555 Other La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4812474 Sensitive lineage4.3.3 pe
ERR4811101 Other lineage4.4.2 None
ERR4811708 HR-TB lineage4 None
ERR4812328 Other lineage4.3.3 pe
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4812495 Other lineage4.1.2.1 pe
ERR5917985 MDR-TB lineage2.2.1 None
ERR6866241 Other lineage4.3.2 None
ERR6359070 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR8975044 Other lineage4.1.1.2 None
ERR736831 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9786276 Sensitive lineage4.8 None
ERR9786076 Sensitive lineage3 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
ERR9786705 Sensitive lineage4.1.2.1 None
ERR9787336 Other lineage6 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR10993951 RR-TB La1.6 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR1172717 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR11462861 Other La1.8.1 None
SRR1173170 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173740 Other None
SRR1173515 HR-TB lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175474 HR-TB lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181368 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR11972227 Pre-XDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972380 Pre-XDR-TB lineage2.2.1.1 None
SRR13180205 Sensitive lineage4.1.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13180204 Sensitive lineage3 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR16156775 Other lineage4.9 None
SRR14801720 RR-TB lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
SRR16156188 HR-TB lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR16157123 Other lineage4.9 None