EBG00000313339 - n.2652G>C
Drug resistance types
77 Sensitive
41 RR-TB
28 HR-TB
32 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 4 |
| lineage4.8 | 46 |
| lineage4.9 | 93 |
| lineage2.2.1 | 39 |
| La1.6 | 1 |
| La1.8.1 | 13 |
| lineage4.3.3 | 7 |
| lineage4.3.4.2.1 | 4 |
| lineage2.2.2 | 6 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 3 |
| La1.7.1 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage4.4.2 | 4 |
| lineage4.1.1.3 | 7 |
| La1.3 | 7 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.1.2.1 | 8 |
| lineage3 | 8 |
| lineage3.1.1 | 4 |
| lineage4.4.1.1 | 4 |
| lineage1.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.7 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4.1.2 | 1 |
| lineage6.1.3 | 2 |
| lineage4.8.1 | 2 |
| lineage4.2.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 309 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798823 | HR-TB | lineage4 | None | ERR978751 | Other | lineage4.8 | None | SRR1180250 | Other | lineage4.9 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR21469200 | Other | La1.7.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR4769408 | Other | La1.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3276144 | Other | lineage3 | nl | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR10762248 | MDR-TB | lineage4.2.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR978735 | Other | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR978694 | Other | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR5163959 | Other | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7617847 | Other | La1.8.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4811708 | HR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR6359069 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4769552 | Sensitive | La1.3 | None | ERR978747 | Other | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR867566 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR736831 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR13423546 | Other | lineage4.4.2 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4816322 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978761 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18912069 | Other | lineage4.1.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR7069931 | Other | lineage4.2.2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR6045191 | Sensitive | lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR10796634 | Other | lineage4.7 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4813767 | Sensitive | lineage4.3.2 | None | ERR978762 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR14801720 | Other | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1184329 | Other | lineage4.9 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR1792012 | Other | La1.8.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR1181256 | Other | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR10796591 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None |
|---|
