ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
ERR2229233
|
Sensitive
|
lineage4.8;lineage4.9
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
SRR1173310
|
Other
|
lineage3.1.1
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
ERR11465189
|
RR-TB
|
lineage4.9.1
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR14801720
|
Other
|
lineage4.8
|
None
|
ERR9787030
|
RR-TB
|
lineage6.1.2
|
None
|
SRR6046253
|
Sensitive
|
lineage4.9
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
ERR11465152
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR473303
|
Sensitive
|
lineage4.9
|
None
|
SAMN02567682
|
Other
|
lineage4.6.1.1
|
ug
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR4816856
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
ERR4816232
|
Other
|
lineage4
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR9971168
|
Other
|
lineage4.3.2.1
|
None
|
SRR1792011
|
Other
|
La1.8.1
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
ERR11465279
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR4798769
|
Other
|
lineage1.1.3.3
|
None
|
ERR2515230
|
Sensitive
|
lineage4.8
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR6866807
|
RR-TB
|
lineage4.9
|
None
|
ERR4024582
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR4819166
|
Other
|
lineage3
|
gb
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR10315558
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6397733
|
Other
|
lineage4.4.1.2
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4769518
|
Sensitive
|
lineage4.9
|
None
|
ERR4769421
|
Other
|
La1.2
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
ERR9786276
|
Sensitive
|
lineage4.8
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR4769427
|
Other
|
La1.2
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
SRR11349191
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11465235
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4819579
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR2513082
|
Other
|
lineage4.1.2.1
|
gb
|
ERR4816964
|
HR-TB
|
lineage4.9
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
ERR019855
|
Other
|
lineage3
|
None
|
SRR13180204
|
Other
|
lineage3
|
None
|
SRR18002933
|
Other
|
lineage2.2.1
|
None
|
ERR2229733
|
Other
|
lineage4.8
|
dk
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR18213721
|
Other
|
lineage4.8
|
None
|
ERR10796626
|
Other
|
lineage4.1.2.1
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
ERR11466444
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR983238
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR4821318
|
HR-TB
|
lineage4.6.2.2
|
gb
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR4820720
|
Other
|
lineage4.1.2.1
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR2228838
|
Other
|
lineage4.8
|
None
|
ERR2179662
|
Sensitive
|
lineage4.5
|
cn
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR6046343
|
Other
|
lineage2.2.1
|
None
|
SRR7236134
|
Other
|
La1.8.1
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR1815538
|
Other
|
La1.7.1
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR4818904
|
Other
|
lineage4.8
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR5087596
|
Other
|
La1.8.1
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR11465353
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR023450
|
RR-TB
|
lineage2.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
ERR5087846
|
Other
|
La1.8.1
|
None
|
ERR978727
|
Other
|
lineage4.8
|
None
|
SRR7069193
|
Other
|
lineage4.3.1.1
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4818570
|
Other
|
lineage4.3.3
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR11465830
|
Sensitive
|
lineage4.9
|
None
|
ERR11465151
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4821286
|
Other
|
lineage4.8
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR10796578
|
Other
|
lineage2.2.1
|
None
|
ERR978751
|
Other
|
lineage4.8
|
None
|
ERR4815471
|
HR-TB
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR6045516
|
Other
|
lineage3.1.1
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR14801759
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR4819324
|
Other
|
lineage4.8
|
gb
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR7069839
|
Other
|
lineage4.8
|
None
|
ERR216978
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
ERR2229147
|
Other
|
lineage4.8
|
None
|
ERR560443
|
Sensitive
|
La1.2.BCG;lineage4.9
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR5709926
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9117760
|
HR-TB
|
lineage4.3
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
SRR1173833
|
Other
|
lineage4.9
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4187652
|
Other
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR10796632
|
Other
|
lineage4.3.3
|
None
|
ERR3797080
|
Sensitive
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR10762297
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR28044873
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
ERR9786639
|
Sensitive
|
lineage4.8
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR911929_ERR911930
|
Other
|
lineage4.8
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
SRR7070320
|
Other
|
lineage4.8
|
None
|
ERR978694
|
Other
|
lineage4.8
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR7069347
|
Other
|
lineage4.1.2.1
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR6045664
|
Other
|
lineage4.2.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR6982246
|
RR-TB
|
lineage4.1.2;lineage4.9
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6397579
|
Other
|
lineage4.4.1.2
|
ca
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
ERR11465604
|
HR-TB
|
lineage4.8.1
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR4586795
|
Other
|
La1.8.1
|
None
|
ERR2229436
|
Other
|
lineage4.8
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR3283033
|
Sensitive
|
lineage4.9
|
None
|
ERR978747
|
Other
|
lineage4.8
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR2228810
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR11466445
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2229811
|
Other
|
lineage4.8
|
dk
|
ERR4821119
|
Other
|
lineage4.4.1.1
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4457829
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4818050
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR228180
|
Sensitive
|
lineage3
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR2100537
|
Sensitive
|
lineage3
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6152899
|
MDR-TB
|
lineage2.2.2
|
ca
|
ERR2229234
|
Sensitive
|
lineage4.8
|
None
|
SRR11342680
|
Other
|
lineage4.8
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341313
|
Other
|
La1.7;lineage4.9;lineage7
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SRR18002976
|
Other
|
lineage2.2.1
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6824501
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6152980
|
HR-TB
|
lineage4.8
|
ca
|
SRR7070293
|
Other
|
lineage4.8
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR4812328
|
Other
|
lineage4.3.3
|
pe
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
ERR4817398
|
Other
|
lineage3.1.1
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR6855695
|
Sensitive
|
lineage4.8
|
None
|
SRR9971223
|
Other
|
lineage2.2.1
|
None
|
ERR911930
|
Other
|
lineage4.8
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR18002903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
SRR11972417
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
SRR1792025
|
Other
|
La1.8.1
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR11465490
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SRR5431730
|
Other
|
La1.8.1
|
None
|
SRR7070087
|
Other
|
lineage4.8.1
|
None
|
SRR023487
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4821272
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR4819198
|
Other
|
lineage2.2.1
|
None
|
ERR4769506
|
Sensitive
|
lineage4.9
|
None
|
SRR1723899
|
Sensitive
|
lineage4.5
|
cn
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
ERR2229366
|
Other
|
lineage4.8
|
None
|
ERR4769552
|
Sensitive
|
La1.3
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
SRR10379910
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR2228899
|
Other
|
lineage4.8
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
DRR185024
|
Other
|
lineage2.2.2
|
None
|
ERR9285979
|
RR-TB
|
lineage3.1.1
|
None
|
SRR10614047
|
Sensitive
|
lineage4.9
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
ERR3324368
|
RR-TB
|
lineage1.1.2;lineage6.2.3
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR911929
|
Other
|
lineage4.8
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
SRR15276982
|
XDR-TB
|
lineage3
|
None
|
SRR6045424
|
Other
|
lineage1.1.2
|
None
|
ERR9786346
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR3957925
|
Sensitive
|
lineage4.3.2
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4818691
|
Other
|
lineage4.8
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4769555
|
Sensitive
|
La1.3
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
DRR034348
|
Other
|
lineage2.2.1
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
ERR4815502
|
Other
|
lineage4.1
|
None
|
SRR21469202
|
Other
|
La1.7.1
|
None
|
SRR1792012
|
Other
|
La1.8.1
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1791725
|
Other
|
La1.8.1
|
None
|
SRR2100532
|
Sensitive
|
lineage3
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR19303805
|
Sensitive
|
lineage4.8
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
ERR181824
|
MDR-TB
|
lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
ERR11465351
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4819011
|
Other
|
lineage3.1.2.1
|
None
|
ERR10762275
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR1173182
|
Other
|
lineage4.6.1.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Other
|
lineage3
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
SRR6045217
|
Other
|
lineage4.9
|
None
|
SRR3675565
|
Other
|
lineage4
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
DRR184629
|
Other
|
lineage2.2.1
|
None
|
SRR6397640
|
Other
|
lineage4.2.1.1
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6045548
|
Other
|
lineage4.9
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR216965
|
Sensitive
|
lineage4.9
|
None
|
SRR14334195
|
Other
|
lineage2.2.1
|
None
|
ERR9119669
|
MDR-TB
|
lineage4.9
|
None
|
ERR228175
|
Sensitive
|
lineage3
|
None
|
ERR176580
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
SRR10272567
|
Sensitive
|
lineage4.3.3
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR978748
|
Other
|
lineage4.8
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR3797019
|
Other
|
La1.8.1
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR10796565
|
Other
|
lineage4.9
|
None
|
SRR21469200
|
Other
|
La1.7.1
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR4816198
|
Sensitive
|
lineage4.1.3
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SAMEA3450033
|
Other
|
lineage4.8
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR3445502
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1792024
|
Other
|
La1.8.1
|
None
|
ERR2229541
|
Other
|
lineage4.8
|
None
|
ERR2228890
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
SRR6397443
|
Sensitive
|
lineage3.1.1
|
ca
|
ERR11465509
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1173421
|
Other
|
lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
ERR4817070
|
Other
|
lineage1.1.2
|
None
|
SRR15508556
|
Other
|
lineage4.3.4.1
|
None
|
ERR11465829
|
Sensitive
|
lineage4.9
|
None
|
SRR1173719
|
Other
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
ERR10796597
|
Other
|
lineage4.3.3
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR10869254
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
ERR270777
|
HR-TB
|
lineage4.1.2
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR978734
|
RR-TB
|
lineage4.8
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR4816417
|
Other
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
DRR184982
|
Other
|
lineage2.2.1
|
None
|
ERR212114
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
ERR171135
|
Other
|
lineage2.2.1
|
za
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR5341432
|
Other
|
La1.7;lineage4.9;lineage7
|
None
|
ERR9117812
|
Other
|
lineage4.3.1.1
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR6045422
|
Other
|
lineage4.3.1.1
|
None
|
ERR4596944
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
SRR1173834
|
Other
|
lineage4.6.1.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
ERR11465232
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR6359069
|
HR-TB
|
lineage4.9
|
None
|
ERR2229204
|
Other
|
lineage4.8
|
None
|
SRR7069518
|
Other
|
lineage4.8
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
ERR10796636
|
Other
|
lineage4.1.2.1
|
None
|
ERR4769516
|
Sensitive
|
lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
ERR11466062
|
Sensitive
|
lineage4.9.1
|
None
|