Run ID: ERR2229233
Sample name:
Date: 31-03-2023 16:50:28
Number of reads: 136667
Percentage reads mapped: 50.69
Strain: lineage4
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6468 | p.Ala410Val | missense_variant | 0.29 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 8477 | c.1176C>A | synonymous_variant | 0.29 |
gyrA | 8507 | c.1206C>T | synonymous_variant | 0.33 |
gyrA | 8819 | p.Ser506Arg | missense_variant | 0.67 |
gyrA | 8869 | p.Thr523Met | missense_variant | 0.5 |
gyrA | 9132 | c.1834_1836delATC | conservative_inframe_deletion | 1.0 |
fgd1 | 491605 | p.Leu275Met | missense_variant | 0.5 |
mshA | 576628 | c.1281G>T | synonymous_variant | 0.22 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.4 |
rpoB | 762057 | p.Ile751Val | missense_variant | 0.4 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.4 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.4 |
rpoB | 762080 | c.2274G>C | synonymous_variant | 0.4 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.4 |
rpoC | 762887 | c.-483G>C | upstream_gene_variant | 1.0 |
rpoC | 762902 | c.-468C>T | upstream_gene_variant | 1.0 |
rpoC | 762923 | c.-447C>G | upstream_gene_variant | 0.67 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.5 |
rpoC | 762959 | c.-411G>C | upstream_gene_variant | 0.43 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.43 |
rpoC | 763034 | c.-336C>A | upstream_gene_variant | 0.33 |
rpoC | 763507 | c.138G>C | synonymous_variant | 1.0 |
rpoC | 763528 | c.159G>C | synonymous_variant | 1.0 |
rpoC | 763531 | c.162G>C | synonymous_variant | 1.0 |
rpoC | 763534 | c.165T>C | synonymous_variant | 1.0 |
rpoC | 763546 | c.177A>G | synonymous_variant | 1.0 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 1.0 |
rpoC | 763570 | c.201G>C | synonymous_variant | 1.0 |
rpoC | 763578 | p.Phe70Tyr | missense_variant | 1.0 |
rpoC | 763589 | p.Ile74Val | missense_variant | 0.67 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 0.75 |
rpoC | 763630 | c.261G>C | synonymous_variant | 0.75 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.75 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.75 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.75 |
rpoC | 763647 | p.Gly93Ala | missense_variant | 0.75 |
rpoC | 763655 | p.Glu96Lys | missense_variant | 0.8 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.8 |
rpoC | 763666 | c.297G>C | synonymous_variant | 0.8 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.5 |
rpoC | 763699 | c.330G>C | synonymous_variant | 0.5 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.4 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.4 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.4 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.4 |
rpoC | 763724 | p.Asp119Asn | missense_variant | 0.4 |
rpoC | 763729 | c.360G>C | synonymous_variant | 0.4 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.4 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.4 |
rpoC | 763751 | p.Ile128Val | missense_variant | 0.67 |
rpoC | 763845 | p.Arg159His | missense_variant | 0.29 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.5 |
rpoC | 764572 | c.1203G>C | synonymous_variant | 0.57 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.57 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.57 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.57 |
rpoC | 764605 | c.1236G>C | synonymous_variant | 0.57 |
rpoC | 764609 | p.Arg414Cys | missense_variant | 0.29 |
rpoC | 764620 | c.1251G>C | synonymous_variant | 0.57 |
rpoC | 764623 | c.1254C>G | synonymous_variant | 0.57 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.5 |
rpoC | 764635 | c.1266C>G | synonymous_variant | 0.5 |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.33 |
rpoC | 766000 | c.2631G>C | synonymous_variant | 0.33 |
rpoC | 766003 | c.2634G>C | synonymous_variant | 0.33 |
rpoC | 766009 | c.2640G>C | synonymous_variant | 0.5 |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.4 |
mmpL5 | 775598 | p.Phe961Leu | missense_variant | 0.67 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776138 | c.2343C>A | synonymous_variant | 0.25 |
mmpL5 | 778282 | c.198delC | frameshift_variant | 0.4 |
mmpR5 | 779230 | p.Glu81* | stop_gained | 0.4 |
mmpS5 | 779567 | c.-662G>T | upstream_gene_variant | 0.22 |
mmpS5 | 779589 | c.-684C>A | upstream_gene_variant | 0.33 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781493 | c.-67C>A | upstream_gene_variant | 0.4 |
rplC | 801240 | c.432G>T | synonymous_variant | 0.33 |
fbiC | 1304207 | p.Arg426Leu | missense_variant | 0.67 |
Rv1258c | 1406685 | p.Val219Asp | missense_variant | 1.0 |
embR | 1416461 | p.Ala296Asp | missense_variant | 0.33 |
rrs | 1472122 | n.277G>T | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472124 | n.279C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472150 | n.305T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472151 | n.306C>A | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472155 | n.310C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472623 | n.778A>C | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472647 | n.802C>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472677 | n.832C>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472682 | n.837T>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472683 | n.838T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472687 | n.842A>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472707 | n.862A>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472958 | n.1113A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472973 | n.1128A>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472974 | n.1129A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472988 | n.1143T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.8 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473089 | n.1244A>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.6 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.6 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473123 | n.1278A>G | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473148 | n.1303G>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1473163 | n.1318C>A | non_coding_transcript_exon_variant | 0.86 |
rrs | 1473173 | n.1328C>T | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473221 | n.1376C>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473262 | n.1417T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473276 | n.1431A>C | non_coding_transcript_exon_variant | 0.9 |
rrs | 1473283 | n.1438T>C | non_coding_transcript_exon_variant | 0.8 |
rrs | 1473284 | n.1439A>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473301 | n.1456T>G | non_coding_transcript_exon_variant | 0.83 |
rrs | 1473314 | n.1469A>G | non_coding_transcript_exon_variant | 0.56 |
rrs | 1473315 | n.1470T>C | non_coding_transcript_exon_variant | 0.56 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.56 |
rrs | 1473319 | n.1474C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1474200 | n.545delT | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474627 | n.970G>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474758 | n.1101G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.7 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474831 | n.1174A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474903 | n.1246T>C | non_coding_transcript_exon_variant | 0.56 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.56 |
rrl | 1475696 | n.2039T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475703 | n.2046A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475751 | n.2094C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475756 | n.2099T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475759 | n.2102C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475762 | n.2105G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475883 | n.2226A>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475892 | n.2235A>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.82 |
rrl | 1475900 | n.2243A>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1475916 | n.2259C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475945 | n.2288C>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476179 | n.2522C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476207 | n.2550T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476212 | n.2555T>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476221 | n.2564T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476267 | n.2610G>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476276 | n.2619C>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476279 | n.2622G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476295 | n.2638C>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476306 | n.2649A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476307 | n.2650A>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476311 | n.2654G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476357 | n.2700T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476513 | n.2856G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476523 | n.2866T>C | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476528 | n.2871A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476600 | n.2943A>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476607 | n.2950C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476616 | n.2959A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476630 | n.2973A>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476633 | n.2976A>G | non_coding_transcript_exon_variant | 0.43 |
inhA | 1674684 | p.Met161Ile | missense_variant | 0.67 |
inhA | 1674752 | p.Val184Ala | missense_variant | 0.4 |
rpsA | 1833413 | c.-129G>A | upstream_gene_variant | 1.0 |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.25 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.4 |
rpsA | 1833732 | p.Pro64Leu | missense_variant | 0.4 |
rpsA | 1833735 | p.Ala65Asp | missense_variant | 0.2 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.4 |
rpsA | 1833770 | p.Asn77Ala | missense_variant | 0.5 |
rpsA | 1833776 | p.Val79Ile | missense_variant | 0.44 |
rpsA | 1833781 | c.240T>C | synonymous_variant | 0.38 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.33 |
rpsA | 1833797 | p.Val86Ile | missense_variant | 0.33 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.33 |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.33 |
rpsA | 1833815 | p.Thr92Gln | missense_variant | 0.33 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.4 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.29 |
rpsA | 1833955 | c.414G>C | synonymous_variant | 0.29 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.33 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.33 |
rpsA | 1833985 | c.444G>C | synonymous_variant | 0.33 |
rpsA | 1833994 | c.453G>C | synonymous_variant | 0.33 |
rpsA | 1833997 | c.456G>C | synonymous_variant | 0.33 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.43 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.33 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.29 |
rpsA | 1834024 | c.483G>C | synonymous_variant | 0.29 |
rpsA | 1834034 | p.Ile165Val | missense_variant | 0.29 |
rpsA | 1834040 | p.Lys167Arg | missense_variant | 0.33 |
rpsA | 1834046 | p.Ile169Leu | missense_variant | 0.33 |
rpsA | 1834219 | c.678C>G | synonymous_variant | 0.22 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.25 |
rpsA | 1834231 | c.690T>C | synonymous_variant | 0.33 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.33 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.33 |
rpsA | 1834243 | c.702G>C | synonymous_variant | 0.33 |
rpsA | 1834246 | c.705G>C | synonymous_variant | 0.33 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.33 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.33 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.33 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.5 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.5 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.5 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 0.5 |
rpsA | 1834327 | c.786G>C | synonymous_variant | 0.57 |
rpsA | 1834340 | p.Met267Phe | missense_variant | 0.5 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.5 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 0.5 |
rpsA | 1834360 | c.819G>C | synonymous_variant | 0.5 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.5 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.5 |
rpsA | 1834378 | c.837T>G | synonymous_variant | 0.5 |
rpsA | 1834384 | c.843A>G | synonymous_variant | 0.5 |
rpsA | 1834395 | p.Arg285Gln | missense_variant | 0.5 |
rpsA | 1834397 | p.His286Ala | missense_variant | 0.5 |
rpsA | 1834576 | p.Met345Ile | missense_variant | 1.0 |
rpsA | 1834600 | c.1059G>C | synonymous_variant | 0.67 |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 0.67 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.67 |
rpsA | 1834612 | c.1071G>C | synonymous_variant | 0.67 |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 0.67 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
ndh | 2101925 | p.Val373Gly | missense_variant | 0.4 |
ndh | 2103123 | c.-81G>T | upstream_gene_variant | 0.29 |
katG | 2154330 | p.Phe594Leu | missense_variant | 0.4 |
katG | 2154574 | p.Asp513Val | missense_variant | 0.5 |
katG | 2155256 | p.Pro286Thr | missense_variant | 1.0 |
PPE35 | 2168728 | p.Gly629Arg | missense_variant | 1.0 |
Rv1979c | 2222483 | p.Ala228Ser | missense_variant | 0.5 |
Rv1979c | 2222563 | p.Ser201Ile | missense_variant | 0.5 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518303 | p.His63Gln | missense_variant | 0.33 |
eis | 2714645 | p.Arg230Ser | missense_variant | 0.67 |
folC | 2747213 | p.Pro129Gln | missense_variant | 0.67 |
folC | 2747344 | c.255G>T | synonymous_variant | 0.25 |
pepQ | 2860486 | c.-68G>A | upstream_gene_variant | 1.0 |
Rv2752c | 3064796 | p.Leu466Ile | missense_variant | 0.33 |
Rv2752c | 3065051 | c.1141C>T | synonymous_variant | 0.4 |
thyX | 3067693 | p.Ile85Phe | missense_variant | 0.29 |
thyX | 3067822 | p.Ala42Ser | missense_variant | 0.25 |
whiB7 | 3568433 | p.Arg83Ser | missense_variant | 0.33 |
Rv3236c | 3611992 | c.1125T>A | synonymous_variant | 0.4 |
fbiA | 3641172 | p.Met210Ile | missense_variant | 0.67 |
fbiB | 3641301 | c.-234C>A | upstream_gene_variant | 1.0 |
fbiB | 3641352 | c.-183C>A | upstream_gene_variant | 0.5 |
fbiB | 3642641 | p.Glu369Asp | missense_variant | 0.25 |
ddn | 3986760 | c.-84G>T | upstream_gene_variant | 0.5 |
clpC1 | 4038635 | c.2070C>T | synonymous_variant | 0.4 |
clpC1 | 4038675 | p.Val677Gly | missense_variant | 0.33 |
clpC1 | 4039562 | c.1143C>A | synonymous_variant | 0.33 |
clpC1 | 4040583 | p.Gly41Val | missense_variant | 1.0 |
panD | 4044016 | p.Ala89Val | missense_variant | 0.4 |
embC | 4239750 | c.-113G>A | upstream_gene_variant | 0.4 |
embC | 4240836 | p.Gly325Val | missense_variant | 0.67 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4244200 | p.Trp323Leu | missense_variant | 0.5 |
embA | 4246080 | p.Pro950Thr | missense_variant | 0.33 |
embB | 4248437 | p.Thr642Ala | missense_variant | 1.0 |
aftB | 4268164 | p.Gln225Lys | missense_variant | 0.5 |
aftB | 4268414 | p.Ser141Arg | missense_variant | 0.5 |
ethA | 4327404 | p.Gln24Lys | missense_variant | 0.5 |
ethA | 4327418 | p.Ala19Val | missense_variant | 0.5 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4408175 | p.Ala10Ser | missense_variant | 0.33 |
gid | 4408237 | c.-35C>T | upstream_gene_variant | 0.5 |