EBG00000313339 - n.2235A>C
Drug resistance types
33 Sensitive
26 RR-TB
50 HR-TB
23 MDR-TB
26 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| La1.8.1 | 1 |
| lineage2.2.1 | 31 |
| lineage3 | 7 |
| lineage4.1;lineage1.1.1.1 | 1 |
| lineage4 | 10 |
| lineage4.3.2 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage4.9;La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.3 | 8 |
| lineage5.1.1 | 2 |
| lineage4.6.5 | 2 |
| lineage2.2 | 13 |
| 8 | |
| lineage2.2.2 | 14 |
| lineage4.4.1.1 | 3 |
| lineage4.4.2 | 2 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.6.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.8 | 39 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.1.2 | 2 |
| lineage1.2.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.6.2.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4;lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.3;lineage3 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 230 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796590 | Other | lineage4.9 | None | SRR8600288 | Other | La1.8.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | ERR1063855 | Other | lineage4 | None | SRR7517817 | MDR-TB | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR405191 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3957925 | Sensitive | lineage4.3.2 | None | ERR3439277 | Sensitive | lineage4.9 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR5866312 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865032 | MDR-TB | lineage4.3.3 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR751336 | Sensitive | lineage5.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9119098 | Sensitive | lineage4.3.3 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013599 | HR-TB | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1013617 | MDR-TB | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR10272567 | Sensitive | lineage4.3.3 | None | SRR10272569 | Sensitive | lineage4.4.1.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048885 | MDR-TB | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048983 | HR-TB | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1140677 | MDR-TB | lineage4.6.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR12006699 | Sensitive | lineage1.2.1.2.1 | None | SRR16058050 | Sensitive | lineage1.2.1.2.1 | None | SRR12882155 | RR-TB | lineage1.2.2.2 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399219 | HR-TB | lineage4.3.4.2 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR16149168 | MDR-TB | lineage4.2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR19303792 | Sensitive | lineage4.1.2.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3085326 | Sensitive | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR3082067 | Sensitive | lineage4.8 | None | SRR8003011 | MDR-TB | lineage4.8 | in | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR2229540 | Other | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4815836 | Other | lineage4.8.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229147 | Other | lineage4.8 | None | ERR212165 | Sensitive | lineage4.3.4.2.1 | mw | ERR2229204 | Other | lineage4.8 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2229691 | Sensitive | lineage4.8 | None | ERR4816800 | Other | lineage4.8 | gb | ERR2229804 | Other | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR2228910 | Other | lineage4.8 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMEA3450033 | Other | lineage4.8 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819462 | Other | lineage4 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819357 | Other | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820107 | RR-TB | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821579 | Other | lineage4.3.4.2 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6046115 | Sensitive | lineage3 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046385 | Other | lineage4.9 | None | SRR6397443 | Sensitive | lineage3.1.1 | ca | SRR6046602 | HR-TB | lineage4.1.2.1 | gb | SRR6046907 | Other | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397733 | Other | lineage4.4.1.2 | None |
|---|
