EBG00000313339 - n.848C>G
Drug resistance types
7 Sensitive
33 RR-TB
9 HR-TB
40 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
126 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 13 |
| lineage2.2.2 | 6 |
| lineage4.1.2 | 4 |
| lineage4.1.1.1 | 5 |
| lineage2.2.1 | 45 |
| lineage4.3.3 | 13 |
| lineage4.9 | 25 |
| lineage1.1.3.1 | 3 |
| La1.8.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.2.1 | 18 |
| lineage4.8 | 19 |
| lineage4.1.1.3 | 1 |
| lineage4 | 2 |
| lineage4.2.1 | 12 |
| lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.1.1.3.1 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.1 | 3 |
| La1.7.1 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1 | 3 |
| lineage5.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| La1.2 | 1 |
| La1.4 | 1 |
| 2 | |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.7 | 5 |
| lineage4.8.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.3 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117788 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4817294 | Other | lineage4.1.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797068 | Other | La1.8.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR4820324 | Other | lineage4 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR2514173 | Other | lineage4.5 | gb | SRR6044952 | Other | lineage4.9 | None | ERR4816549 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR7070320 | Other | lineage4.8 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR7069347 | Other | lineage4.1.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR7069319 | Other | lineage4.5 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR1815538 | Other | La1.7.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR10796578 | Other | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR11465487 | Sensitive | lineage4.1.2.1 | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | ERR4816464 | Other | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR1173719 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR16156775 | Other | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR2229233 | Sensitive | lineage4.8;lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR7069839 | Other | lineage4.8 | None | SRR7851312 | Other | La1.2 | None | SRR16278274 | Other | La1.4 | None | ERR867571 | Other | lineage4.9 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR176605 | HR-TB | lineage4.3.4.2.1 | mw | ERR4817060 | Other | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4819017 | Other | lineage3 | None | SRR7131123 | Other | lineage4.8 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR4814362 | Other | lineage4.8 | None | DRR184629 | Other | lineage2.2.1 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4811708 | HR-TB | lineage4 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4820107 | Other | lineage1.2.1.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR10796591 | Other | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4817069 | RR-TB | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2513223 | Sensitive | lineage4.1.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | ERR4816702 | Other | lineage4.6.2.2 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6046117 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1735596 | RR-TB | lineage4.9 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR867574 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR10796596 | Other | lineage4.9 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR4817189 | Other | lineage4.7 | None |
|---|
