EBG00000313339 - n.883T>G


Drug resistance types
8 Sensitive 64 RR-TB 20 HR-TB 67 MDR-TB 26 Pre-XDR-TB 1 XDR-TB 194 Other
lineage Counts
lineage Count
lineage4.9 47
lineage4.3.4.2;lineage4.9 1
lineage4.8 71
lineage4.1.2 4
lineage3.1.2.1 4
lineage1.1.1.1 1
lineage4.3.2.1 2
lineage4.1.2.1 18
lineage2.2.1 73
lineage2.2.1;lineage2.2.2 1
lineage4.2.2.2 4
lineage4.1.1.3 5
lineage4.4.1.1.1 2
lineage4.3.2 2
lineage4.1.1.3.1 2
lineage4.3.4.2.1 5
lineage1.2.2.2 3
lineage4.4.1.2 3
lineage4.3.4.1 2
La1.6 1
lineage1.2.1.1 1
lineage3.1.1 3
lineage2.2.1;lineage4 1
lineage2.2.1;lineage4.8 1
lineage4.2.1 12
lineage4.3.3 10
lineage4.1.1.1 4
lineage4.2.1.1 2
lineage4.3.4.2 4
lineage2.2.1.1 3
lineage2.2;lineage4 1
lineage2.2.2 8
lineage3 19
lineage6.1.2 1
lineage4.4 1
lineage3.1.2;lineage4.1.1.3.1 1
lineage4.7 3
lineage3.1.2.1;lineage4.9 1
lineage4.5 1
lineage5.1.1 1
lineage3.1.1;lineage4.9 1
La1.8.1 4
lineage4.4.1.1 6
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.6.2.2 3
lineage4.4.2 4
lineage4.8;lineage4.9 1
lineage4.9.1 1
lineage4.3 2
lineage4.1;lineage4.9 1
lineage1.1.3.3 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.8.1 2
lineage3.1.2.2 1
lineage4.1.2.1;lineage4.9 2
lineage4 2
lineage3;lineage4.2.2.2 1
lineage2.2.1;lineage4.9 1
lineage3;lineage4 1
lineage4.1.3 1
lineage2.2.1;lineage4.2.1 1
lineage4.3.4.1;lineage4.9 1
lineage4.3.1.1 1
lineage1.1.3.2 1
3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1 1
lineage4.2.2 1
La2 1
lineage6.1.3 1
lineage4.6.5 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 380
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173719 Other lineage4.9 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
ERR2228900 Other lineage4.8 None
SRR6045158 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR7069097 Other lineage3.1.2.1 None
SRR3675389 Other lineage4.9 None
ERR270777 HR-TB lineage4.1.2 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR6045191 Sensitive lineage4.9 None
ERR867571 Other lineage4.9 None
SRR19304115 Other lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
SRR1173770 Other lineage4.9 None
ERR2027230 Other lineage4.2.2.2 None
ERR3283006 RR-TB lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR4819863 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
ERR978761 Other lineage4.8 None
SRR1173833 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR4972588 MDR-TB lineage4.3.2 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR7070144 Other lineage4.8 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
SRR7070369 Other lineage1.2.2.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR6397733 Other lineage4.4.1.2 None
SRR6044952 Other lineage4.9 None
ERR4819011 Other lineage3.1.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR10796562 Other lineage4.3.4.1 None
SRR10993951 RR-TB La1.6 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
SRR7645971 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR502481 RR-TB lineage4.9 None
SRR6397579 Other lineage4.4.1.2 ca
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR978747 Other lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR6045464 Other lineage4.1.1.3 None
ERR2229811 Other lineage4.8 dk
SRR6397640 Other lineage4.2.1.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
SAMEA3501015 Other lineage4.8 None
ERR10219876 Other lineage4.3.4.2 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR2229234 Sensitive lineage4.8 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR10430377 MDR-TB lineage2.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR6046343 Other lineage2.2.1 None
SRR7069687 Other lineage4.1.1.3.1 None
ERR978735 Other lineage4.8 None
ERR3275709 HR-TB lineage3 nl
ERR978762 Other lineage4.8 None
SRR18002976 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR18913779 Other lineage3 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR16627752 RR-TB lineage4.4 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR19304104 Other lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR6982141 Other lineage4.3.3 None
SRR18003009 MDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR4816470 HR-TB lineage3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR911930 Other lineage4.8 None
SRR7645928 Other lineage4.7 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7131237 Other lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
ERR502517 Other lineage5.1.1 None
ERR978693 Other lineage4.8 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR5311077 Other La1.8.1 None
SRR6397815 Other lineage4.4.1.1 None
ERR867541 MDR-TB lineage4.2.1 None
ERR978751 Other lineage4.8 None
ERR867544 Other lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
ERR5979407 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR7131121 Other lineage4.3.3 None
ERR2229366 Other lineage4.8 None
ERR10796560 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR4813263 MDR-TB lineage4.8 None
SRR7069946 Other lineage4.8 None
ERR3797062 RR-TB lineage4.9 None
ERR2228899 Other lineage4.8 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR7069648 Other lineage4.6.2.2 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR10796553 Other lineage4.9 None
SRR15276982 XDR-TB lineage3 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR978734 RR-TB lineage4.8 None
SRR18003032 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR2229233 Sensitive lineage4.8;lineage4.9 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR978750 RR-TB lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR7069839 Other lineage4.8 None
ERR10796593 Other lineage4.3 None
SRR6785281 Other lineage4.2.1.1 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR867521 MDR-TB lineage2.2.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR6046442 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4798769 Other lineage1.1.3.3 None
SRR11349207 RR-TB lineage2.2.1 None
ERR5865953 MDR-TB lineage2.2.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR10796635 Other lineage4.8 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR978694 Other lineage4.8 None
SRR20632814 Sensitive lineage4.9 None
ERR978756 Other lineage4.8 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR6046440 Other lineage3.1.2.2 None
ERR3468613 Other La1.8.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR6045553 Other lineage4.1.2.1;lineage4.9 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR2229733 Other lineage4.8 dk
SRR7755655 Other lineage4.1.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR10796599 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1140724 Other lineage2.2.1 None
SAMN02628522 Pre-XDR-TB lineage3 ir
ERR10796581 Other lineage4.1.2 None
SRR7131161 Other lineage4.8 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR4818050 Sensitive lineage4.6.2.2 None
ERR978757 RR-TB lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR19303817 Other lineage2.2.1 None
SRR6152899 MDR-TB lineage2.2.2 ca
ERR3275941 RR-TB lineage4.3 nl
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR5818694 Other lineage3;lineage4.2.2.2 None
SRR7645973 Other lineage4.3.4.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
ERR2228838 Other lineage4.8 None
ERR2513405 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR7645927 Other lineage4.8 None
SRR18002937 Other lineage2.2.1 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR18002963 Other lineage2.2.1 None
SRR7755652 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
ERR978765 RR-TB lineage4.8 None
SRR19303949 Other lineage4.3.3 None
ERR10796640 Other lineage4.1.2.1 None
SRR18002956 Other lineage2.2.1 None
ERR978727 Other lineage4.8 None
ERR10796592 Other lineage4.9 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR3675582 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 Other lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
ERR4820030 Other lineage4.9 None
SRR6046616 Other lineage4.3.1.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR11342646 HR-TB lineage3 None
ERR10796578 Other lineage2.2.1 None
ERR9117788 Other lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR7069074 Other lineage3 None
SRR7070419 Other lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR2514801 Other lineage1.1.3.2 gb
SRR1180179 Pre-XDR-TB lineage3 None
ERR978767 RR-TB lineage4.8 None
SRR1172885 HR-TB lineage4.9 None
SRR19303907 Other lineage4.8 None
ERR2228910 Other lineage4.8 None
SRR1173421 Other lineage4.9 None
ERR3468488 Other La1.8.1 None
SRR3675509 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
DRR185024 Other lineage2.2.2 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR978752 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR19303818 Other lineage4.3.4.2 None
ERR10796589 Other lineage4.9 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
SRR6045957 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SAMEA3501070 RR-TB lineage4.8 None
SRR7068912 Pre-XDR-TB lineage2.2.1 None
SRR7646014 MDR-TB lineage4.2.1 None
SRR6045384 Other lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR4816856 Other lineage4.1.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR7496523 Other lineage4.7 None
ERR978760 RR-TB lineage4.8 None
SAMEA3501052 RR-TB lineage4.8 None
SRR18002987 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR6046729 Other lineage3 None
SRR18572455 Sensitive lineage4.9 None
ERR4817069 RR-TB None
ERR4796577 HR-TB None
SRR7535086 Other None
ERR4819166 Other lineage3 gb
SRR22048536 Other lineage4.3.3 None
ERR978733 RR-TB lineage4.8 None
SRR7755657 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070320 Other lineage4.8 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR978694_ERR978693 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
ERR10796626 Other lineage4.1.2.1 None
DRR184629 Other lineage2.2.1 None
SRR6046117 Other lineage4.9 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR7755642 MDR-TB lineage4.2.1 None
ERR2513259 Other lineage3 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR6045909 Other lineage4.8.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR10796571 Other lineage4.9 None
ERR1815538 Other La1.7.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR7069800 Other lineage3.1.2.1 None
ERR5087596 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR10796568 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR6152980 HR-TB lineage4.8 ca
SRR7070293 Other lineage4.8 None
SRR13888750 Other La2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR7069835 Other lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR9971223 Other lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6044841 Other lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7070329 Other lineage3 None
ERR10796596 Other lineage4.9 None
SRR7131287 Other lineage2.2.1.1 None
SRR6045496 Other lineage6.1.3 None
SRR023487 RR-TB lineage2.2.1 None
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR7069664 Other lineage4.1.2 None
ERR4819198 Other lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
ERR502474 RR-TB lineage4.9 None
ERR10796577 Other lineage4.9 None
SRR19303815 Other lineage4.8 None
SRR11349203 MDR-TB lineage4.4.1.1 None
ERR978766 RR-TB lineage4.8 None
SRR6046848 Other lineage4.6.5 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1173170 Other lineage4.9 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None