EBG00000313339 - n.872A>C
Drug resistance types
17 Sensitive
41 RR-TB
15 HR-TB
15 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
131 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 4 |
| lineage3 | 22 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| 8 | |
| lineage4.3.4.2 | 5 |
| lineage1.2.2.2 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.8 | 42 |
| lineage4.2.2.2 | 3 |
| lineage5.1.1 | 1 |
| lineage4.7 | 4 |
| lineage3.1.1 | 3 |
| lineage1.1.2 | 4 |
| lineage4.1.2 | 5 |
| lineage5 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.2 | 3 |
| lineage4.1.1.3 | 6 |
| lineage4.3.3 | 6 |
| lineage2.2.1 | 27 |
| lineage4.3.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1 | 1 |
| La1.8.1 | 1 |
| lineage4.2.1.1 | 2 |
| lineage3.1.2 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage3.1.2.2 | 3 |
| lineage4.6.5 | 1 |
| lineage4 | 7 |
| lineage4;lineage3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 11 |
| lineage4.9 | 13 |
| lineage4.3.2.1 | 2 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| lineage4.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1 | 1 |
| lineage4.3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 42 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820188 | Other | lineage3 | gb | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR502478 | RR-TB | None | SRR7496471 | Sensitive | None | ERR502473 | RR-TB | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR5818690 | Other | lineage4.2.2.2 | None | ERR2228815 | RR-TB | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4817189 | Other | lineage4.7 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR502474 | RR-TB | None | ERR2229024 | Sensitive | lineage4.8 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR6046359 | Other | lineage4.7 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SRR6398010 | Sensitive | lineage4.2.1 | ca | ERR2228900 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2229325 | Other | lineage4.8 | dk | DRR185024 | Other | lineage2.2.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR6045295 | Other | lineage4.7 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR2229233 | Sensitive | lineage4.8 | None | ERR502470 | RR-TB | None | SRR6397359 | Other | lineage4.3.2 | ca | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | SRR4033490 | Other | lineage2.2.2 | za | ERR2229147 | Other | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR502479 | RR-TB | None | ERR4815502 | Other | lineage4.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR2513619 | Other | lineage4.8 | gb | ERR3468488 | RR-TB | La1.8.1 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4821105 | Other | lineage3.1.2 | gb | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6046442 | Other | lineage3 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4817398 | Other | lineage3.1.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4821101 | Sensitive | lineage4.2.2.2 | gb | ERR4829835 | HR-TB | lineage4.8 | it | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046802 | Other | lineage4 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR6045952 | HR-TB | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2229760 | Other | lineage4.8 | dk | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4816470 | Other | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR9117806 | Other | lineage4.8 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR16370621 | Sensitive | lineage4.1.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR4814911 | Other | lineage4.3.3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR9117695 | Other | lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6045384 | Other | lineage4.1.2 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131234 | Other | lineage4.9 | None | SRR7585435 | Other | lineage4.9 | None | ERR2027207 | Sensitive | lineage3 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR10796568 | Other | lineage4.9 | None | ERR2514896 | Other | lineage3 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR1172075 | Pre-XDR-TB | lineage3 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4815816 | Other | lineage4.5 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819385 | Other | lineage2.2.1 | gb | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816232 | Other | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4821761 | Other | lineage3 | gb | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR19317519 | Sensitive | lineage4.1.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR5863736 | MDR-TB | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR2229801 | Other | lineage4 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR2514834 | Other | lineage4.7 | None | ERR4815919 | Other | lineage4.8 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR4818548 | Other | lineage4.3.3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4819655 | Other | lineage4.8 | None | ERR502523 | Other | lineage6.3.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4817703 | Other | lineage1.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR9117728 | Other | lineage3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4815804 | Other | lineage4.2.1 | gb | SRR1175052 | HR-TB | lineage4.9 | None | SRR14088360 | Sensitive | lineage3 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19304109 | Other | lineage4.8 | None | ERR10796592 | Other | lineage4 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4819007 | Other | lineage2.2.1 | None | SRR3675533 | Sensitive | lineage3 | None | SRR4034747 | MDR-TB | lineage4.4.1.1 | za | SRR6397640 | Other | lineage4.2.1.1 | None | ERR502481 | RR-TB | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR2229436 | Other | lineage4.8 | None | SRR3675565 | Other | lineage4 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2229733 | Other | lineage4.8 | dk | SRR6045843 | Other | lineage4.2.2.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | DRR184629 | Other | lineage2.2.1 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | SRR6045464 | Other | lineage4.1.1.3 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6398013 | Other | lineage4.1.2 | ca | SAMEA3501015 | Other | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR2101462 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR6045944 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | SRR4034734 | Sensitive | lineage4.3.2.1 | za | DRR184932 | Other | lineage2.2.1 | None | ERR2229577 | Sensitive | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR2100877 | HR-TB | lineage4.1.2 | None |
|---|
