EBG00000313339 - n.882C>T
Drug resistance types
40 Sensitive
93 RR-TB
37 HR-TB
80 MDR-TB
40 Pre-XDR-TB
0 XDR-TB
354 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 95 |
| lineage4.8 | 71 |
| lineage6.1.1 | 1 |
| 16 | |
| lineage2.2.1.1 | 4 |
| lineage4.3.3 | 21 |
| lineage1.1.2 | 9 |
| lineage4.1.2.1 | 44 |
| lineage3 | 64 |
| lineage4.1.1.3 | 14 |
| lineage4.1.3 | 1 |
| La1.7.1 | 1 |
| lineage1.1.3.1 | 4 |
| lineage4.9 | 66 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4 | 23 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 5 |
| lineage4.2.1 | 14 |
| lineage5 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2 | 7 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.2.2.2 | 6 |
| lineage3.1 | 2 |
| lineage4.4.1.1 | 14 |
| lineage4.1.2 | 9 |
| lineage3.1.1 | 6 |
| lineage4.6 | 2 |
| lineage4.7 | 6 |
| lineage4.1.1 | 5 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 5 |
| lineage1.1.1 | 1 |
| lineage4.2.1.1 | 3 |
| lineage1 | 1 |
| lineage4.6.2.2 | 12 |
| lineage3.1.2 | 4 |
| lineage3.1.3 | 3 |
| lineage4.3.2 | 7 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.1 | 6 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.8.1 | 3 |
| lineage1.1.3.2 | 2 |
| lineage4.3.4.2.1 | 6 |
| La3 | 1 |
| lineage4.3.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.4 | 2 |
| lineage3.1.2.2 | 4 |
| lineage4.9;lineage3 | 1 |
| lineage2.2.2 | 8 |
| lineage4.4.1.2 | 3 |
| lineage6.3.1 | 1 |
| lineage5.1.1 | 1 |
| La1.8.1 | 7 |
| lineage4.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
| La1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 2 |
| lineage4.6.1 | 1 |
| La2 | 1 |
| lineage4.4.2 | 3 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage6 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 644 |
Geographic prevalence
Country level data for this variant is available for 61 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21595927 | HR-TB | lineage2.2.1 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR22048377 | Sensitive | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR176771 | Sensitive | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815613 | Other | lineage3 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815365 | Sensitive | lineage4.8 | gb | ERR1815538 | Other | La1.7.1 | None | ERR4814714 | Other | lineage3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4815472 | Other | lineage4.9 | gb | SRR3675227 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR4814745 | Other | lineage4.6.5 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675288 | Other | lineage3 | None | ERR4814775 | Other | lineage1.1.2 | None | SRR3675265 | Other | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814952 | Sensitive | lineage3 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815061 | Sensitive | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816967 | RR-TB | lineage5 | None | SRR3675533 | Sensitive | lineage3 | None | SRR3675513 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR2027207 | Sensitive | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816232 | Other | lineage4 | None | ERR4817025 | Sensitive | lineage2.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | SRR3675565 | Other | lineage3 | None | ERR2229147 | Other | lineage4.8 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817069 | RR-TB | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816397 | Other | lineage1.1.2 | None | ERR4816464 | Other | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR2229760 | Other | lineage4.8 | dk | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4816699 | Other | lineage4.6 | None | ERR4817189 | Other | lineage4.7 | None | ERR2229325 | Other | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR2229801 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4815804 | Other | lineage4.2.1 | gb | ERR2228890 | Other | lineage4 | None | ERR4817301 | Other | lineage4.9 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4817703 | Other | lineage1.1.1 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817665 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4818988 | Other | lineage1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817874 | Other | lineage3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4819007 | Other | lineage2.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818752 | Other | lineage3 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2512536 | Other | lineage3.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR2513259 | Other | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818556 | Other | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007186 | Other | lineage4.6 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819192 | Other | lineage3 | None | ERR2513356 | Other | lineage4.5 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819166 | Other | lineage3 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR2513619 | Other | lineage4.8 | gb | ERR2513681 | Other | lineage1.1.2 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2513910 | Other | lineage3 | gb | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819385 | Other | lineage2.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR2514279 | Other | lineage3 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819630 | Other | lineage4.8 | gb | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819655 | Other | lineage4.8 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514668 | Other | lineage4.8.1 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4819821 | Other | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2514896 | Other | lineage3 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820107 | RR-TB | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4821812 | Other | lineage4.8 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820188 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820194 | Other | La3 | None | ERR4820944 | Other | lineage4.1.1.3 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821101 | Sensitive | lineage4.2.2.2 | gb | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821093 | Other | lineage4.3.3 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4822043 | Other | lineage4.1.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR6045743 | Other | lineage3 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045952 | HR-TB | None | SRR6045958 | Other | lineage3 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6046208 | Other | lineage4 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6045295 | Other | lineage4.7 | None | SRR6045365 | Other | lineage3 | gb | SRR6045384 | Other | lineage4.1.2 | None | SRR6046064 | Other | lineage3 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046291 | Other | lineage3 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046398 | Other | lineage4.1.1.3.1 | gb | ERR2851359 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046442 | Other | lineage3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6046517 | Other | lineage4.8 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6397642 | RR-TB | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046790 | Other | lineage4.7 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6046729 | Other | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397359 | Other | lineage4.3.2 | ca | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6398010 | Sensitive | lineage4.2.1 | ca | SRR6398013 | Other | lineage4.1.2 | ca | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6896229 | Other | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR502523 | Other | lineage6.3.1 | None | SRR6964650 | Sensitive | lineage3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5162082 | Other | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131146 | Sensitive | lineage4.6.2.2 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131288 | Other | lineage4.6.2.2 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7585435 | Other | lineage4.9 | None | SRR7517748 | HR-TB | lineage4.4.1.1 | None | SRR7535086 | Other | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR8600288 | Other | La1.8.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971070 | MDR-TB | lineage4.8.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR184629 | Other | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796588 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796629 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797068 | Other | La1.8.1 | None | ERR5863736 | MDR-TB | lineage2.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR4769518 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5863990 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR5864324 | MDR-TB | lineage2.2.1 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117728 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR10993953 | Other | La1.6 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1172075 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR13888750 | Other | La2 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972436 | Sensitive | lineage3.1.2 | None | SRR14088360 | Sensitive | lineage3 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16370621 | Sensitive | lineage4.1.2.1 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002938 | Sensitive | lineage2.2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR18213726 | Other | lineage3 | None | SRR18913779 | Other | lineage3 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR19303775 | Other | lineage3 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304096 | Other | La1.2 | None | SRR19428621 | MDR-TB | lineage1.2.2.2 | None | SRR19317519 | Sensitive | lineage4.1.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2100877 | HR-TB | lineage4.1.2 | None |
|---|
