EBG00000313325 - n.1417T>C
Drug resistance types
26 Sensitive
20 RR-TB
4 HR-TB
22 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage4.8 | 12 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.9 | 27 |
| lineage4.1.2.1 | 12 |
| lineage4.5 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1 | 25 |
| lineage4.3.3 | 9 |
| lineage4.2.1 | 3 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.3 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.3.1.1 | 3 |
| lineage6.3.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4 | 1 |
| lineage2.2.2 | 4 |
| lineage3.1.2.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.4.1.1 | 4 |
| La1.3 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 3 |
| La3;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage6.2.3 | 1 |
| lineage6.1.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR9119683 | Other | lineage4.2.1 | None | ERR2229233 | Sensitive | lineage4.8;lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR10796593 | Other | lineage4.3 | None | SRR12006070 | Sensitive | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR12006091 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR10796628 | Other | lineage4.3.3 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4829208 | Other | lineage4.8 | None | ERR3283043 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR10796586 | Other | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR12006067 | Sensitive | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4820891 | Sensitive | lineage4.9 | gb | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR10796580 | Other | lineage4 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR12006095 | Sensitive | lineage4.9 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070320 | Other | lineage4.8 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR12006068 | Sensitive | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR867575 | Other | lineage4.9 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR4769423 | Other | La1.3 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796559 | Other | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR4812763 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514645 | Sensitive | lineage4.3.4.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4817464 | Sensitive | lineage3.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR4821761 | Other | lineage3 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR10796630 | Other | lineage6.2.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2513223 | Sensitive | lineage4.1.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR10796564 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | SRR1238559 | Other | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | SRR11342688 | Other | lineage4.2.2.2 | None | ERR867572 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4817189 | Other | lineage4.7 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None |
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