EBG00000313339 - n.2226A>C
Drug resistance types
88 Sensitive
59 RR-TB
27 HR-TB
85 MDR-TB
40 Pre-XDR-TB
2 XDR-TB
273 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 92 |
| lineage4.9 | 69 |
| lineage2.2.2 | 12 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.2.1 | 16 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 2 |
| lineage5.1.1 | 6 |
| lineage4.1.1.3 | 6 |
| lineage2.2.1.1 | 9 |
| lineage3 | 39 |
| lineage4.4.1.1 | 17 |
| lineage4.2.2.2 | 11 |
| La1.8.1 | 4 |
| lineage4.3.3 | 17 |
| lineage3.1.1 | 13 |
| lineage4.1.2.1 | 29 |
| lineage4.3.4.1 | 6 |
| lineage4.6.2.2 | 7 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.1 | 3 |
| lineage4.3.1.1 | 7 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8 | 39 |
| lineage4.4.1.1.1 | 5 |
| lineage2.2.2;lineage4 | 3 |
| lineage4.4.2 | 2 |
| lineage3.1.3 | 3 |
| lineage4.1.2 | 9 |
| lineage1.1.2 | 4 |
| lineage4.2.2 | 3 |
| lineage4.3.2.1 | 7 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.2 | 6 |
| lineage4.8.2 | 2 |
| lineage3.1.2 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.2.2.2 | 10 |
| 1 | |
| lineage3.1.2.2 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.6.1.1 | 9 |
| lineage4.6.1.2 | 7 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.7 | 3 |
| lineage4.8.1 | 4 |
| lineage3;lineage4 | 3 |
| La1.3 | 3 |
| lineage1.1.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage1.2.2.1 | 3 |
| lineage1.2.1.1 | 2 |
| lineage4.8;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 6 |
| lineage4 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.5 | 2 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage6.1.2 | 2 |
| lineage4.1.1.1 | 4 |
| lineage3.1.2.1 | 4 |
| La1.2 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6.2.3 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.6.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6 | 1 |
| lineage4.1.4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.3.1 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2 | 1 |
| La2 | 1 |
| lineage4.1.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 574 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR751345 | Other | lineage5.1.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR9971222 | RR-TB | lineage2.2.1.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR18003035 | Other | La1.8.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR7069030 | Other | lineage3 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR5979407 | Other | lineage3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR10796582 | Other | lineage4.3.4.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18213726 | Other | lineage3 | None | ERR10796577 | Other | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR1173281 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR7069518 | Other | lineage4.8 | None | SRR1173719 | Other | lineage4.9 | None | ERR9119120 | Other | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7070571 | Sensitive | lineage3 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1140586 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7068998 | Sensitive | lineage3.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4821054 | Sensitive | lineage3 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR2600609 | Other | lineage4.8 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR1182985 | Pre-XDR-TB | lineage3 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1013597 | Sensitive | lineage2.2.2;lineage4 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR751337 | Sensitive | lineage5.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR6045743 | Other | lineage3 | None | SRR7068927 | Other | lineage1.2.2.2 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR4817060 | Other | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR4819307 | Other | lineage4.3.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR1140627 | Sensitive | lineage4.6.1.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4819017 | Other | lineage3 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR6046291 | Other | lineage3 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR751336 | Sensitive | lineage5.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR1049744 | Sensitive | lineage4.6.1.1 | None | ERR4769436 | Other | La1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR1172065 | Pre-XDR-TB | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR1183080 | Other | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046064 | Other | lineage3 | gb | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR4814714 | Other | lineage3 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5007170 | Other | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6044904 | Other | lineage3 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1049735 | Sensitive | lineage4.9 | None | ERR4816667 | Other | lineage2.2.2 | None | SRR18002988 | MDR-TB | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR10796598 | Other | lineage4.9 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR10796573 | Other | lineage4.8 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR2229233 | Sensitive | lineage4.8;lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR7069858 | Other | lineage1.2.1.2.1 | None | SRR6045928 | Other | lineage4.9 | None | ERR10796580 | Other | lineage4 | None | ERR867571 | Other | lineage4.9 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7070609 | Other | lineage4.2.2.2 | None | SRR5007165 | Other | lineage3 | None | SRR1180446 | Other | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR10796566 | Other | lineage4.9 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | ERR4769480 | Other | La1.3 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR7069319 | Other | lineage4.5 | None | ERR9117699 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR10796622 | Other | lineage4.8 | None | SRR6046815 | Other | lineage3 | None | SRR7585400 | MDR-TB | lineage3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR6045485 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR3675227 | Sensitive | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR7645974 | Other | lineage4.3.4.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR3675532 | HR-TB | lineage3.1.3 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR22048484 | Sensitive | lineage4.8 | None | ERR10796599 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR7068982 | Other | lineage4.3.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR3283043 | Other | lineage4.9 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR1062937 | Sensitive | lineage4.6.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4818797 | Sensitive | lineage4.5 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7068876 | Other | lineage4.8 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR1062895 | Sensitive | lineage4.6.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR13199734 | Other | La1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR7069074 | Other | lineage3 | None | ERR4817294 | Other | lineage4.1.2 | None | SRR7069954 | Other | lineage1.2.2.2 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR8758881 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | ERR751338 | Other | lineage5.1.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7069377 | Other | lineage3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR4816696 | Other | lineage3 | None | SRR7069189 | HR-TB | lineage4.1.2.1 | None | SRR1183377 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18213680 | Sensitive | lineage3 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR1049736 | Sensitive | lineage4.9 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4816403 | Other | lineage6.2.3 | None | SRR7070230 | Other | lineage2.2.1.2 | None | SRR7070461 | Other | lineage3 | None | ERR1873455 | Pre-XDR-TB | lineage2.2.1 | za | ERR10796593 | Other | lineage4.3 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR7645895 | Other | lineage2.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4829817 | Sensitive | lineage4.3.3 | it | SRR1173766 | Sensitive | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6153150 | Other | lineage3.1.1 | None | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR7069091 | Other | lineage4.6.2 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR7755657 | Other | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | SRR7645971 | Other | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR176817 | Sensitive | lineage4.3.4.2.1 | mw | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3468613 | Other | La1.8.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR18213721 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4815923 | Sensitive | lineage4.8 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR7069249 | Sensitive | lineage3 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR7069638 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | SRR18002954 | Other | lineage2.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049030 | Sensitive | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | SRR7069441 | Sensitive | lineage4.8 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4818538 | Sensitive | lineage3 | gb | SRR20969542 | Other | lineage4.4.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4820107 | Other | lineage1.2.1.2.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5908124 | Other | lineage4.8 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR7069314 | Other | lineage3 | None | SRR10315547 | Sensitive | lineage2.2.1 | None | SRR7070256 | Other | lineage4.2.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR3439265 | Sensitive | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR1815538 | Other | La1.7.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR978765 | RR-TB | lineage4.8 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR10796565 | Other | lineage4.9 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR7645927 | Other | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None | DRR188816 | Other | lineage4.2.2 | None | SRR5163959 | Other | lineage4.9 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069725 | Sensitive | lineage4.1.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR18213736 | Other | lineage3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR1049031 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None |
|---|
