lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage4.8 | 6 |
lineage2.2.1.2 | 1 |
lineage4.1.1.1 | 2 |
lineage4.1.2.1 | 4 |
lineage4.1.2 | 2 |
La1.8.1 | 3 |
lineage4.4.1.1.1 | 2 |
lineage4.1.1.2 | 1 |
lineage4.9 | 8 |
La1.7.1 | 1 |
lineage4.4.1.1 | 3 |
lineage3.1.1 | 1 |
lineage4.8.1 | 2 |
lineage4.3.4.1 | 2 |
lineage4.3.3 | 4 |
lineage4.2.2.2 | 2 |
lineage3 | 2 |
lineage4.8.2;lineage4.9 | 1 |
lineage4.1.1.3 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.4.2 | 1 |
lineage4.2.1 | 1 |
lineage4.3.3;lineage4.8 | 1 |
lineage1.1.2;lineage6.2.3 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4188213 | Other | La1.8.1 | None | ERR11465563 | Other | lineage4.1.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1792022 | Other | La1.8.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1792011 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4821747 | Sensitive | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None |
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