Rv0668 - c.1197C>G
Drug resistance types
148 Sensitive
68 RR-TB
214 HR-TB
68 MDR-TB
48 Pre-XDR-TB
1 XDR-TB
255 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 43 |
| lineage4.6.2.2 | 5 |
| lineage1.1 | 1 |
| lineage4.9 | 147 |
| lineage5.2 | 2 |
| 188 | |
| lineage4.1.2.1.1 | 2 |
| lineage2.2 | 13 |
| lineage2.2.1 | 62 |
| lineage4.3.3 | 11 |
| lineage4.2.1 | 6 |
| lineage4.1 | 5 |
| lineage4.1.1.3 | 6 |
| lineage4.3 | 2 |
| La1.8.1 | 9 |
| lineage4 | 73 |
| lineage3.1 | 5 |
| lineage5.1.1 | 1 |
| La2 | 2 |
| lineage3 | 30 |
| lineage4.7 | 4 |
| lineage4.4.2 | 3 |
| lineage4.3.4.2.1 | 11 |
| lineage4.8 | 17 |
| lineage4.8.1 | 1 |
| lineage4.6.1.1 | 5 |
| lineage4.4.1.2 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.1.3 | 2 |
| lineage5.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.2 | 3 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 3 |
| lineage3.1.2.1 | 3 |
| lineage2 | 5 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage2.2.2 | 7 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.4.1.1 | 8 |
| lineage4.3.4.1 | 3 |
| lineage4.5 | 4 |
| lineage4.3.2 | 2 |
| lineage4.6.5 | 2 |
| lineage1.1.3.2 | 1 |
| lineage1.1.2 | 4 |
| lineage3.1.1 | 5 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.1.1 | 4 |
| lineage6 | 2 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 8 |
| lineage4.6.1 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.1 | 4 |
| La1.4 | 1 |
| La1.7.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage1.2.1.1 | 2 |
| lineage5 | 2 |
| lineage4;lineage2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.1.3 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 802 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR4972483 | Pre-XDR-TB | lineage4.1.2.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785238 | Sensitive | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR294248 | HR-TB | None | SRR6785262 | Sensitive | lineage4.2.1 | None | ERR5311081 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789626 | Other | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR323036 | HR-TB | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311099 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294266 | HR-TB | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR7496471 | Sensitive | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR8217918 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496509 | Other | None | SRR7585435 | Other | lineage4.9 | None | SRR7496517 | Other | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7496523 | Other | lineage4.7 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | ERR038289 | Other | lineage4.3.3 | None | DRR188519 | Other | lineage4.4.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR11049143 | Sensitive | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR363437 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797071 | Other | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769419 | Other | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769423 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769472 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4811515 | Sensitive | lineage2.2.1 | cn | ERR5336148 | Other | None | ERR4811708 | HR-TB | lineage4 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6198317 | Other | La1.2 | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736839 | Other | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736874 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR9786671 | Other | None | ERR9787336 | Other | lineage6 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787197 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR990545 | Other | lineage3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR069989 | HR-TB | lineage2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1048885 | MDR-TB | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1048982 | HR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049041 | MDR-TB | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049723 | MDR-TB | lineage4.6.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1049744 | Sensitive | lineage4.6.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173153 | HR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837502 | Sensitive | lineage4.9 | None | SRR13837544 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156775 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR1640750 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303775 | Other | lineage3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303884 | HR-TB | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304036 | HR-TB | None | SRR19303931 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR20970016 | Other | lineage2.2 | None | SRR21277111 | Other | lineage2.2.1.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR11068570 | Other | lineage4 | None | ERR11081258 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675465 | HR-TB | None | ERR4815310 | Other | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675486 | HR-TB | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR1750907 | RR-TB | None | ERR4814841 | Other | lineage4.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815528 | Other | lineage4.8 | None | ERR3275201 | Sensitive | lineage4.8 | nl | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675311 | Other | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675412 | Sensitive | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR2229542 | Other | lineage4.8 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR3275220 | Other | lineage3 | nl | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816999 | Other | None | ERR212034 | HR-TB | None | SRR3675540 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4817037 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR212033 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | ERR4817069 | RR-TB | None | SRR3675572 | Other | None | ERR4816397 | Other | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR4816466 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816756 | RR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR2512986 | Other | lineage3 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR7496472 | Other | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR2513054 | Other | lineage4.2.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2509885 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2446570 | Sensitive | lineage4.8 | nl | ERR4818536 | Other | lineage4.9 | None | ERR2446144 | Other | lineage3 | nl | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818615 | Other | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4820324 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR2514692 | Other | None | ERR4819842 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | ERR1023509 | Other | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820586 | Other | lineage3 | gb | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693237 | Other | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693231 | Other | None | ERR2517528 | Other | lineage3 | nl | ERR4821057 | HR-TB | lineage4 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | ERR2693239 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR278594 | HR-TB | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821214 | RR-TB | None | ERR4821310 | Other | lineage5 | None | ERR4821276 | Other | lineage3 | None | ERR2693227 | Other | lineage4.9 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR6045555 | HR-TB | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821712 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045010 | Other | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6325442 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045014 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | ERR4830353 | Other | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None |
|---|
