EBG00000313339 - n.1079C>T


Drug resistance types
26 Sensitive 38 RR-TB 13 HR-TB 40 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 113 Other
lineage Counts
lineage Count
lineage4.1.2.1 13
lineage4.8 17
lineage4.9 38
lineage4.2.1 7
lineage1.1.3.1 2
lineage2.2.2 4
lineage1.1.2;lineage6.2.3 1
lineage2.2.1 51
lineage4.4.2 5
lineage4.1.2 1
lineage3 10
lineage4.3.3 7
lineage4.1.1.3 7
1
La1.8.1 7
La1.6 1
lineage6.1.1 8
lineage4.4.1.1 2
lineage2.2.1;lineage4 1
lineage4 2
lineage2.2;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.1 4
lineage4.3.4.2.1 6
lineage2.2.1.1 3
La2 1
lineage4.3.1.1 2
lineage1.2.2.2 3
lineage4.8.1 2
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.3.4.1 4
La1.2 2
lineage4.2.2.2 2
lineage4.3.3;lineage4.9 1
lineage4.4.1.2 1
lineage1.1.1 1
lineage1.2.1.2.1 1
La1.4 1
lineage4.1 1
La1.7.1 3
lineage4.1.2.1;lineage4.4.1 1
lineage4.1.2;lineage4.9 1
lineage3;lineage4 2
lineage4.1.3 1
lineage4.7 2
lineage3.1.2.1;lineage4.9 1
lineage4.5 1
lineage5.1.1 1
lineage1.2.1.2 1
lineage4.6.2.2 2
lineage4.1.1.1 1
lineage4.3.2.1 2
lineage4.2.1.1 2
lineage1.1.2 1
lineage4.3.4.2 2
lineage3.1.2.1 1
lineage4.3 1
lineage2.2.1;lineage4.9 1
lineage4.4 1
lineage4.2.2 1
lineage4.3.3;lineage4.8 1
lineage4.1.2.1;lineage4.9 1
lineage3.1.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 255
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4813263 MDR-TB lineage4.8 None
SRR1173170 Other lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR3797062 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
SRR18003032 Other lineage2.2.1 None
ERR2514351 Sensitive lineage3 gb
ERR9992879 XDR-TB lineage4.3.3 None
ERR1023509 MDR-TB lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR4817069 RR-TB None
SRR1792022 Other La1.8.1 None
SRR10315558 RR-TB lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
ERR11465776 Sensitive lineage4.1.1.3 None
SRR10993951 RR-TB La1.6 None
ERR1023259 Sensitive lineage6.1.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR3675265 Other lineage4 None
SRR3675565 Other lineage4 None
SRR15316595 RR-TB lineage4.4.2 None
ERR11465777 Sensitive lineage4.1.1.3 None
SRR6045464 Other lineage4.1.1.3 None
SRR1173385 Sensitive lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR3439489 RR-TB La1.8.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4596904 MDR-TB lineage3.1.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR18002963 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR7070293 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7069193 Other lineage4.3.1.1 None
ERR3283032 Other lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR867570 RR-TB lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
SRR1175474 Other lineage4.9 None
SRR18002930 MDR-TB lineage2.2.1 None
ERR11465490 Sensitive lineage4.1.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR7070087 Other lineage4.8.1 None
SRR7069074 Other lineage3 None
DRR184982 Other lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
ERR9117812 Other lineage4.3.1.1 None
ERR11067902 Sensitive lineage4.8 None
SRR19303907 Other lineage4.8 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR19303815 Other lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR7069946 Other lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
ERR3468488 Other La1.8.1 None
ERR11465829 Sensitive lineage4.9 None
SRR1173719 Other lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
ERR867538 Other lineage4.2.2.2 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
ERR4821214 Other lineage1.2.1.2.1 None
SRR1173185 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
ERR9787106 Sensitive lineage6.1.1 None
ERR4815502 Other lineage4.1 None
SRR21469202 Other La1.7.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR867569 Other lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR7070320 Other lineage4.8 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4822138 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR6046117 Other lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR3675230 Other lineage3;lineage4 None
ERR2513405 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR5087596 Other La1.8.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR6046250 Other lineage4.9 None
ERR1023265 Sensitive lineage6.1.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR6982141 Other lineage4.3.3 None
ERR5979454 Pre-XDR-TB lineage3 None
SRR7069835 Other lineage2.2.1 None
SRR7645928 Other lineage4.7 None
SRR3675582 Other lineage4.9 None
ERR4817874 Other lineage3 None
SRR7070515 Other lineage1.1.3.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR11465830 Sensitive lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR18002981 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR7645906 Other lineage2.2.1 None
ERR867555 Other lineage3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR3800996 Sensitive lineage6.1.1 None
SRR7645899 Other lineage2.2.1 None
ERR502517 Other lineage5.1.1 None
SRR1792025 Other La1.8.1 None
SRR20969475 Other lineage1.2.1.2 None
ERR4820030 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR24827300 Sensitive lineage6.1.1 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR502474 RR-TB lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
ERR4820075 Other lineage4.1.2.1 None
SRR1184329 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4818691 Other lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR7851312 Other La1.2 None
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
SRR6785281 Other lineage4.2.1.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR1173770 Other lineage4.9 None
ERR4797718 Sensitive lineage1.1.2 in
SRR1175491 MDR-TB lineage4.3.4.1 None
ERR867521 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
SRR1792011 Other La1.8.1 None
ERR4819863 RR-TB lineage4.9 None
SRR19303805 Sensitive lineage4.8 None
SRR19303899 Other lineage3 None
ERR553341 Sensitive lineage6.1.1 de
SRR21676327 Sensitive lineage6.1.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR22424765 HR-TB lineage4.8 None
ERR6359074 HR-TB lineage4.9 None
SRR6044952 Other lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR9787244 Sensitive lineage6.1.1 None
ERR502481 RR-TB lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR4818050 Sensitive lineage4.6.2.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR6045909 Other lineage4.8.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR11342680 Other lineage4.8 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR7070521 Other lineage4.2.1.1 None
SRR6046343 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
ERR1815538 Other La1.7.1 None
ERR4819002 HR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR4821811 Sensitive lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR502478 RR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4821286 Other lineage4.8 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR11342646 HR-TB lineage3 None
ERR5979407 Other lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1184308 RR-TB lineage4.9 None