EBG00000313325 - n.838T>C


Drug resistance types
70 Sensitive 47 RR-TB 42 HR-TB 29 MDR-TB 15 Pre-XDR-TB 2 XDR-TB 95 Other
lineage Counts
lineage Count
lineage2.2.1 34
lineage4.9 94
lineage4.8 55
La1.3 3
lineage4.4.1.1 2
lineage4.3.2.1 3
lineage4.2.1 4
La1.7.X-unk4 1
lineage3.1.1 4
lineage4.4.2 3
lineage2.2.1;lineage4.9 2
lineage4.1.1.3 7
lineage4.1.1.1 1
lineage4.3.3 5
lineage1.2.1.2 2
lineage2;lineage4 1
La1.7.1 2
lineage2.2.2 4
1
lineage4.4.1.2 2
lineage4.4.1.1.1 1
lineage6.1.3 1
lineage4.3.2 1
lineage3 10
lineage4.6.5 2
lineage4.1.2.1 5
lineage6.1.2 1
lineage2.2;lineage4 1
La1.8.1 9
lineage4.3.4.2.1 5
lineage4.3.3;lineage4.8 3
La1;lineage4.9 1
lineage2;lineage4.9 1
lineage1.1.3.2 1
lineage1.1.2;lineage6.2.3 1
lineage4.3.4.1 3
lineage4.7 1
lineage4.6.1.2 3
lineage2.2.1.1 1
lineage1.1.1 2
lineage4.6.2.2 2
lineage4.1.1.2 1
lineage1.2.2.2 1
lineage4.5 1
lineage4.6.1.1 1
La1.2 1
lineage4.1.2 2
lineage4.2.1.1 1
lineage4.8;lineage4.9 1
lineage4.8.1 1
lineage2.2.1;lineage4 1
lineage4 3
lineage3.1.2;lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 300
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9971270 RR-TB lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR978693 Other lineage4.8 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
SRR6397815 Other lineage4.4.1.1 None
SRR1180319 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR2229366 Other lineage4.8 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1173421 Other lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
ERR3797062 RR-TB lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR3445487 Other La1.7.X-unk4 None
ERR978752 Other lineage4.8 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR911929 Other lineage4.8 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR978746 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10214505 Sensitive lineage1.2.1.2 None
ERR1023509 MDR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SAMEA3501070 RR-TB lineage4.8 None
DRR034348 Other lineage2.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR21469202 Other La1.7.1 None
ERR3283006 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
SRR1173833 Other lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR473334 HR-TB lineage4.9 None
ERR978760 RR-TB lineage4.8 None
ERR4769442 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR4796577 HR-TB None
SAMEA3501065 RR-TB lineage4.8 None
ERR4816852 Other lineage4.9 None
SRR6397733 Other lineage4.4.1.2 None
SRR1181368 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR978694 Other lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR9787336 RR-TB lineage6.1.3 None
SRR6397579 Other lineage4.4.1.2 ca
ERR4816964 HR-TB lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
ERR2229436 Other lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
ERR6866241 Other lineage4.3.2 None
ERR4828879 HR-TB lineage3 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4817667 HR-TB lineage4.8 None
ERR2229811 Other lineage4.8 dk
ERR7801176 RR-TB lineage4.6.5 None
ERR978726 RR-TB lineage4.8 None
ERR4769433 RR-TB lineage4.9 None
ERR4812495 Other lineage4.1.2.1 pe
SAMEA3501015 Other lineage4.8 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR4769423 Other La1.3 None
ERR978757 RR-TB lineage4.8 None
ERR9787033 Sensitive lineage6.1.2 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR2228838 Other lineage4.8 None
ERR4769508 RR-TB lineage4.9 None
SRR7236134 Other La1.8.1 None
ERR3275709 HR-TB lineage3 nl
ERR4818624 Other lineage4.3.4.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4821811 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR4796351 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1175474 Other lineage4.9 None
SRR1792025 Other La1.8.1 None
ERR485006 HR-TB lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
ERR4814976 Other lineage4.9 None
ERR978751 Other lineage4.8 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180250 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR2229541 Other lineage4.8 None
ERR2514801 Other lineage1.1.3.2 gb
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR2228910 Other lineage4.8 None
SRR12708409 HR-TB lineage4.3.3 None
ERR6358951 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR2512423 Other lineage4.1.1.3 None
SRR1180444 Sensitive lineage4.9 None
SRR10614047 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR9971046 MDR-TB lineage4.8 None
ERR2229148 Other lineage4.8 dk
SRR4033549 Other lineage2.2.2 None
ERR978734 RR-TB lineage4.8 None
SRR1173310 Other lineage3.1.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR12708419 Other lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473303 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
SRR18572455 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR978733 RR-TB lineage4.8 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR978756 Other lineage4.8 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
ERR978747 Other lineage4.8 None
SRR11462861 Other La1.8.1 None
SRR16156804 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR2513259 Other lineage3 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR4819314 HR-TB lineage1.1.1 None
ERR5908124 Other lineage4.8 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4821318 HR-TB lineage4.6.2.2 gb
ERR3439489 RR-TB La1.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR228175 Sensitive lineage3 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR8975044 Other lineage4.1.1.2 None
SRR1175487 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR2503533 Other lineage4.1.2.1 fi
ERR736837 Pre-XDR-TB lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4769514 Other La1.3 None
ERR2229198 Sensitive lineage4.8 None
ERR978727 Other lineage4.8 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR21469200 Other La1.7.1 None
SRR1175052 HR-TB lineage4.9 None
ERR911930 Other lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SAMEA3450033 Other lineage4.8 None
ERR4815816 Other lineage4.5 gb
SRR1181214 Other lineage4.9 None
SRR023487 RR-TB lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1175513 Sensitive lineage4.9 None
SRR8651655 Pre-XDR-TB lineage2.2.1 cn
SRR1172885 HR-TB lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR15508556 Other lineage4.3.4.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR2228899 Other lineage4.8 None
ERR2228900 Other lineage4.8 None
ERR4811101 Other lineage4.4.2 None
ERR4769418 Other La1.2 None
ERR4817554 Other lineage1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR270777 HR-TB lineage4.1.2 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR216978 Sensitive lineage4.3.4.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR14801720 Other lineage4.8 None
ERR473323 HR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1180446 Other lineage4.9 None
SRR2100532 Sensitive lineage3 None
ERR978761 Other lineage4.8 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
SRR8600288 Other La1.8.1 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR1792022 Other La1.8.1 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1181403 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR20632814 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
SRR1180345 Other lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR2228810 Other lineage4.8;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1181402 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR10762291 MDR-TB lineage2.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1184021 Sensitive lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR067712 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR216965 Sensitive lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR978735 Other lineage4.8 None
ERR4816762 Sensitive lineage4.9 None
ERR978762 Other lineage4.8 None
ERR4769439 HR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR5087596 Other La1.8.1 None
ERR4798823 HR-TB lineage4 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR6152980 HR-TB lineage4.8 ca
SRR023450 RR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR5087846 Other La1.8.1 None
ERR4812328 Other lineage4.3.3 pe
SRR1181283 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None