EBG00000313339 - n.608G>T
Drug resistance types
6 Sensitive
19 RR-TB
2 HR-TB
15 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2;lineage3.1 | 2 |
| La1.8.1 | 8 |
| lineage5.1.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.9 | 9 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.7 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.5 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4 | 3 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 3 |
| lineage2.2 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.8 | 16 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage3 | 3 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8600107 | Other | La1.8.1 | None | SRR8600232 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR036207 | Other | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR5865002 | MDR-TB | lineage4.3.3 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173833 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229204 | Other | lineage4.8 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR2229810 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513534 | Sensitive | lineage3 | gb | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4821276 | Other | lineage3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4828879 | MDR-TB | lineage3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None |
|---|
