Rv0668 - c.1167G>C
Drug resistance types
44 Sensitive
73 RR-TB
78 HR-TB
137 MDR-TB
15 Pre-XDR-TB
1 XDR-TB
244 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| M.canetti;lineage2.1;lineage4.9 | 26 |
| lineage2.2.1 | 39 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.1.1.3 | 9 |
| lineage4.9 | 116 |
| lineage4.1.2.1 | 29 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 7 |
| lineage2.1;lineage4.9 | 20 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.8 | 22 |
| La1.7.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage3 | 15 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage4.3.4.1 | 4 |
| lineage1.1.2 | 2 |
| La1.2 | 1 |
| La1.8.1 | 5 |
| lineage2.2.1.1 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7 | 2 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage4.6.1.2 | 5 |
| La1.2.BCG | 2 |
| lineage4.4.1.2 | 1 |
| La3;M.canetti | 9 |
| lineage4.1.4 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| M.canetti;lineage2.1;lineage3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.3.3 | 6 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| 25 | |
| M.canetti | 10 |
| La3;lineage4.9 | 7 |
| La3;M.canetti;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.8.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage3;lineage4.9 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage5.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 5 |
| lineage4.6.2.2 | 3 |
| lineage4.2.1 | 2 |
| La1.7;lineage4.9 | 7 |
| lineage4 | 3 |
| La3 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.1.3 | 3 |
| lineage4.1 | 1 |
| La3;lineage2 | 1 |
| lineage2.1 | 5 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage6.1.3 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7.1 | 2 |
| lineage4.1.1.1 | 5 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage1.1.2;lineage4 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2 | 2 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 4 |
| lineage1.2.1.2 | 1 |
| lineage5 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.2.1 | 4 |
| lineage1.2.1.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.8 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage1.1;lineage4 | 1 |
| La1.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.2.2.2 | 2 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.3.4.2 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| La2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 592 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675221 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | ERR11049020 | Other | lineage4.8 | None | ERR926164 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR473332 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11081258 | Other | lineage4.8 | None | SRR3675222 | Other | La1.7 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR9786445 | Other | lineage4.8 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR21732954 | Sensitive | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1915485 | Other | La1.2.BCG | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR1043164 | Other | La3;M.canetti | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675572 | Other | None | SRR18289195 | Sensitive | M.canetti | None | ERR9786671 | Other | None | SRR1175074 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR9117709 | Other | None | ERR234659 | HR-TB | None | SRR18213713 | HR-TB | None | ERR212001 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2446118 | RR-TB | lineage4.1.2.1 | nl | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR10522763 | Sensitive | M.canetti | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR551182 | Sensitive | M.canetti | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3275190 | Other | lineage3 | nl | ERR926163 | Other | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1336823 | Sensitive | La3;M.canetti | None | SRR1196566 | Other | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR2446144 | Other | lineage3 | nl | SRR1172728 | RR-TB | La3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR6044815 | RR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR3275215 | RR-TB | lineage4.1.2.1 | nl | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR25827452 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | SRR13861399 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675494 | RR-TB | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1196546 | Other | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3416776 | Other | lineage2.1 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1172817 | Other | La3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR21469202 | Other | La1.7.1 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR6046594 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR551179 | Sensitive | M.canetti | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR9786604 | Other | None | ERR4815604 | Other | None | SRR6789626 | Other | None | ERR11252736 | Other | lineage4.9 | None | ERR2514692 | Other | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR25827682 | Other | None | ERR9787197 | Other | None | SRR3675236 | Other | None | ERR4816999 | Other | None | SRR28119777 | Other | lineage4.9 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3597004 | Sensitive | M.canetti | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR266125 | Other | La3;M.canetti | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | SRR3675275 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4800341 | HR-TB | lineage3 | None | ERR176651 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR13423649 | Other | lineage2.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797060 | Other | La1.8.1 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR551180 | Sensitive | M.canetti | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR1336822 | Sensitive | M.canetti | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR1336820 | Sensitive | La3;M.canetti | None | SRR21732980 | Other | lineage4.3.3 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | ERR11466174 | Other | lineage4.8 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4814748 | Other | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR3468607 | RR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675311 | Other | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR3275196 | RR-TB | lineage2.2.1 | nl | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926155 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR7496509 | Other | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | SRR1640750 | RR-TB | None | SRR1184372 | MDR-TB | None | SRR7535086 | Other | None | ERR4407463 | HR-TB | None | SRR1196768 | MDR-TB | None | ERR4817060 | Other | None | ERR400529 | Other | lineage3 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR4822104 | Other | lineage3;lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3675549 | Other | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR1180440 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR9786619 | Sensitive | lineage4.8 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4821053 | RR-TB | lineage3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR4820773 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1196677 | Other | lineage2.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9896144 | Other | lineage3 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | ERR3275220 | Other | lineage3 | nl | ERR926162 | Sensitive | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675269 | RR-TB | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR19303775 | Sensitive | lineage3 | None | SRR10522783 | Sensitive | M.canetti | None | ERR2446509 | Other | lineage3 | nl | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR13861381 | HR-TB | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR266120 | Other | M.canetti | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR5087846 | Other | La1.8.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR19303788 | Sensitive | lineage4.8 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR926157 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR266126 | Other | La2;M.canetti | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR2517528 | RR-TB | lineage3 | nl | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR926160 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR926156 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SRR6046305 | Sensitive | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791696 | RR-TB | La1.8.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR6045555 | Other | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1173400 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
|---|
