EBG00000313339 - n.1137C>A


Drug resistance types
105 Sensitive 7 RR-TB 25 HR-TB 40 MDR-TB 11 Pre-XDR-TB 2 XDR-TB 63 Other
lineage Counts
lineage Count
lineage2.2.1 30
lineage2.2.1.1 3
lineage2.2.2;lineage4 2
lineage4.6.2.2 3
M.canetti;lineage4.9 2
La1.2.BCG 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.1 1
La1.2.BCG;lineage4.9 4
lineage4.6.1.2 3
lineage3.1.1 2
lineage4.2.2 6
lineage4.9 42
lineage4.3.2.1 9
lineage6.1.1 1
lineage4.3.2 3
M.canetti;lineage4.2 1
La1.8.1 17
La1.7;M.canetti;lineage4.9 1
lineage4.3.3;lineage4.8 4
lineage4.6.1.1 2
lineage3 3
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2 2
lineage4.3.4.1 10
La1.7;lineage4.9 2
lineage4.9.1 2
lineage4.1.1.3 3
lineage4.1.2.1 11
lineage4.3.4.2.1 3
lineage4.2.2.2 4
lineage4.3.3 8
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.1.1.3;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage1.2.2.1 3
lineage6.1.3 1
lineage4.1.1.1 3
lineage4.8 4
La1;lineage4.9 1
lineage4.1.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.2 1
lineage4.1.4 1
lineage4.4.1.1 4
lineage4 3
lineage2.2.1;lineage4 1
La1.3 1
lineage4.1.1.2 1
lineage4.3.4.2 3
lineage4.9;lineage6.1.3 1
lineage1.2.2.2 1
La1.7.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.7 1
lineage1.1.3.2 2
La1.6 1
La1.7;lineage4.3.4.1 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.1.2;lineage6.2.3 1
lineage2.2.2 1
lineage4.9;lineage7 1
La1.7 1
lineage4.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
1
lineage3.1;lineage9 1
lineage4.5 1
lineage3.1.2.1;lineage4 1
La1.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 253
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13423629 MDR-TB lineage2.2.1 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR1013637 Sensitive lineage2.2.2;lineage4 None
ERR3801503 Other lineage4.6.2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1915484 Other La1.2.BCG None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR560440 Sensitive La1.2.BCG;lineage4.9 None
ERR987757 MDR-TB lineage4.6.1.2 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR5067459 HR-TB lineage4.2.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR3675389 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR502485 Sensitive lineage4.9 None
ERR4192392 Other lineage6.1.1 None
SRR1173185 Other lineage4.9 None
ERR5987396 MDR-TB lineage4.3.2 None
SRR1196478 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1792012 Other La1.8.1 None
ERR5162133 Sensitive La1.8.1 None
ERR502492 Sensitive lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SAMN02567676 MDR-TB lineage4.6.1.1 None
SRR18149443 Sensitive lineage3 None
ERR560442 Sensitive La1.2.BCG;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6832249 Sensitive lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR10482944 Other La1.8.1 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR11466061 Sensitive lineage4.9.1 None
ERR11466044 Other lineage4.1.1.3 None
ERR8025347 Sensitive lineage4.9 None
ERR4627379 Other La1.8.1 None
ERR4627392 Other La1.8.1 None
ERR1213900 RR-TB lineage4.1.2.1 pe
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR3559276 HR-TB lineage4.2.2 None
ERR7801321 Sensitive lineage4.3.4.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SAMN02380985 Sensitive lineage4.2.2.2 None
SRR21675637 Sensitive lineage4.3.3 None
SRR1915483 Other La1.2.BCG None
SRR28119823 Sensitive lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
SRR1175474 Other lineage4.9 None
SRR1792025 Other La1.8.1 None
SRR6855915 Sensitive lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6480593 Sensitive lineage4.1.2.1 None
ERR502498 Sensitive lineage4.9 None
SRR1049568 Sensitive lineage4.2.2.2 None
SRR15508556 Other lineage4.3.4.1 None
SRR1208378 Other lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR11466062 Sensitive lineage4.9.1 None
SAMN02350450 Sensitive lineage1.2.2.1 None
ERR9787153 Other lineage6.1.3 None
SRR6982011 Sensitive lineage4.1.1.1 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
ERR502486 Sensitive lineage4.9 None
ERR5162118 Other La1.8.1 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR400529 Other lineage3 None
SRR1792022 Other La1.8.1 None
SRR6982102 Sensitive lineage2.2.1 None
ERR9786639 Sensitive lineage4.8 None
SRR1011492 Sensitive lineage1.2.2.1 None
ERR4769497 Other La1;lineage4.9 None
SRR6982385 Sensitive lineage4.1.2 None
SAMN02585910 RR-TB lineage2.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR11488417 MDR-TB lineage4.1.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4769427 Other La1.2 None
SRR6981993 Sensitive lineage4.3.2.1 None
SRR1173717 MDR-TB lineage4.6.1.1 None
ERR502490 Sensitive lineage4.9 None
ERR11466070 Sensitive lineage4.3.4.1 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
SRR1915486 Other La1.2.BCG None
ERR3324351 HR-TB lineage4.1.4 None
SRR2101786 Sensitive lineage4.4.1.1 None
ERR3324373 MDR-TB lineage2.2.1 None
SRR305201 Sensitive lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR1035296 HR-TB lineage4.9 br
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR2179857 Sensitive lineage4 None
ERR3324331 MDR-TB lineage4.3.4.1 None
SRR6982448 Sensitive lineage2.2.1;lineage4 None
SRR6045205 Sensitive lineage4.9 None
ERR4188255 Sensitive lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR5311080 Other La1.8.1 None
ERR4769479 Other La1.3 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR502472 Sensitive lineage4.6.2.2 None
ERR8975044 Other lineage4.1.1.2 None
ERR1035297 MDR-TB lineage4.3.4.1 br
SRR15217980 HR-TB lineage4 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6982229 Sensitive lineage2.2.1 None
SRR1062863 Sensitive lineage1.2.2.1 None
SRR3105736 Sensitive lineage1.2.2.2 None
ERR5087846 Other La1.8.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR1049031 Sensitive lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR6982190 Sensitive lineage4.3.3 None
ERR3559283 HR-TB lineage4.2.2 None
ERR3797043 Sensitive lineage4.9 None
ERR4188253 Other La1.8.1 None
ERR560441 Sensitive La1.2.BCG;lineage4.9 None
ERR1213930 Other lineage4.3.2 pe
ERR2693238 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR502484 Sensitive lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR10129602 Sensitive lineage4.3.4.2 None
SAMN02350447 Sensitive lineage2.2.1.1 None
SRR2101663 Sensitive lineage1.1.3.2 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR10993936 Other La1.6 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1013636 Sensitive lineage2.2.2;lineage4 None
SRR2101774 Sensitive lineage2.2.1 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR10614047 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR7911622 Pre-XDR-TB lineage2.2.2 None
SRR13423641 Sensitive lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1208284 Sensitive lineage4.9 None
ERR3324347 Sensitive lineage4.1.2.1 None
SRR1049569 Sensitive lineage4.2.2.2 None
SRR1184329 Other lineage4.9 None
SRR3675222 Other La1.7 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR502497 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR2101681 Sensitive lineage4.8 None
ERR3559282 HR-TB lineage4.2.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR6045138 Other lineage3.1.1 None
ERR560443 Sensitive La1.2.BCG;lineage4.9 None
ERR5865338 MDR-TB lineage2.2.1 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR6982014 Sensitive lineage4.1.1 None
SRR21469202 Other La1.7.1 None
SRR5341254 Other lineage4.2.2.2 in
SRR6982106 Sensitive lineage4.8 None
SRR1792011 Other La1.8.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6982104 Sensitive lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6982405 Sensitive lineage4.4.1.1 None
SRR6982196 Sensitive None
SRR6982050 Other lineage4.3.4.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR502483 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR502489 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR4188010 Other La1.8.1 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR15723110 Sensitive lineage2.2.1 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR1035354 MDR-TB lineage4.1.1 br
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1011489 Sensitive lineage2.2.1.1 None
ERR4769419 Sensitive lineage4.9 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6046492 Other lineage4.9 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
SRR1019130 Sensitive lineage4.3.2.1 None
ERR1035317 RR-TB lineage4.3.4.2 br
SRR6855917 Sensitive lineage4.8 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR3559287 HR-TB lineage4.2.2 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR6896178 Sensitive lineage2.2.1 None
SRR2101651 Sensitive lineage4.3.2.1 None
SRR6045683 Other lineage3.1.2.1;lineage4 None
SRR7755767 Sensitive lineage4.3.3 None
SRR1791899 Sensitive La1.8.1;lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181251 Other lineage2.2.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR1049030 Sensitive lineage4.9 None
ERR181750 Sensitive lineage1.1.3.2 None
ERR4811708 HR-TB lineage4 None
ERR4769507 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR4188187 Sensitive La1.8.1 None
ERR3559275 HR-TB lineage4.2.2 None
SRR17856664 Sensitive lineage3 None
SRR2101803 Sensitive lineage4.3.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2446566 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6896255 Sensitive lineage4.3.3 None
ERR3324362 HR-TB lineage4.1.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR2124081 MDR-TB lineage4.6.1.2 None
SRR7240506 Other La1.8.1 None
SRR6982414 Sensitive lineage4.9 None