EBG00000313339 - n.1137C>A
Drug resistance types
105 Sensitive
7 RR-TB
25 HR-TB
40 MDR-TB
11 Pre-XDR-TB
2 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| 1 | |
| lineage4.3.4.1 | 10 |
| lineage3.1;lineage9 | 1 |
| lineage3 | 3 |
| La1.8.1 | 17 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.2.1 | 11 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 30 |
| La1.2.BCG | 4 |
| lineage4.1.4 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.9 | 42 |
| lineage4.2.2 | 6 |
| La1.3 | 1 |
| lineage4.3.3 | 8 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2 | 3 |
| La1.7.1 | 2 |
| La1.2.BCG;lineage4.9 | 4 |
| lineage4.3.2 | 3 |
| lineage4.3.2.1 | 9 |
| La1.7;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.2.2.2 | 4 |
| lineage1.1.1 | 1 |
| lineage4.6.1.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.9.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.6.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4 | 3 |
| lineage2.2 | 2 |
| lineage3.1.2.1;lineage4 | 1 |
| La1.8.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.2.2.1 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.2;lineage4 | 2 |
| lineage4.1.1.1 | 3 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage3.1.1 | 2 |
| La1.7 | 1 |
| lineage6.1.1 | 1 |
| lineage4.8 | 4 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 253 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982196 | Sensitive | None | SRR6982050 | Other | lineage4.3.4.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR400529 | Other | lineage3 | None | SRR1792022 | Other | La1.8.1 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR11488417 | MDR-TB | lineage4.1.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR1915486 | Other | La1.2.BCG | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR10482944 | Other | La1.8.1 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR4769479 | Other | La1.3 | None | SRR7755767 | Sensitive | lineage4.3.3 | None | ERR1213900 | RR-TB | lineage4.1.2.1 | pe | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181251 | Other | lineage2.2.1 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3559276 | HR-TB | lineage4.2.2 | None | ERR5087846 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR4188187 | Sensitive | La1.8.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR10993936 | Other | La1.6 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1208378 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR1208284 | Sensitive | lineage4.9 | None | SRR5067459 | HR-TB | lineage4.2.2 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR5865338 | MDR-TB | lineage2.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4188010 | Other | La1.8.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR1173717 | MDR-TB | lineage4.6.1.1 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR6832249 | Sensitive | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2179857 | Sensitive | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR6045683 | Other | lineage3.1.2.1;lineage4 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR15217980 | HR-TB | lineage4 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4811708 | HR-TB | lineage4 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1915483 | Other | La1.2.BCG | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR4188253 | Other | La1.8.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | SRR17856664 | Sensitive | lineage3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR2693238 | Sensitive | lineage4.9 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1792024 | Other | La1.8.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR1915484 | Other | La1.2.BCG | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675389 | Other | lineage4.9 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR4192392 | Other | lineage6.1.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR1173185 | Other | lineage4.9 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR5162118 | Other | La1.8.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR1792011 | Other | La1.8.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR305201 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035296 | HR-TB | lineage4.9 | br | SRR6855917 | Sensitive | lineage4.8 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR11466061 | Sensitive | lineage4.9.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR6832787 | Other | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1049031 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6045138 | Other | lineage3.1.1 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1792012 | Other | La1.8.1 | None | SRR5341254 | Other | lineage4.2.2.2 | in | SRR2101617 | Sensitive | lineage4.1.1.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | SAMN02350456 | Sensitive | lineage4.3.2.1 | None |
|---|
