Rv0668 - c.1224C>T


Drug resistance types
51 Sensitive 28 RR-TB 41 HR-TB 52 MDR-TB 8 Pre-XDR-TB 1 XDR-TB 185 Other
lineage Counts
lineage Count
lineage4.9 93
lineage4.6.2.2 3
lineage4.1.1.1 4
lineage1.1.3.2 1
lineage4.2.1 2
lineage4.3.2;lineage4.9 1
lineage2.2.1 23
lineage2.1;lineage4.9 14
lineage4.3.2 1
lineage2.2.2 4
lineage1.2.1.2 1
La2;lineage4.9 1
lineage4.4.1.1 10
lineage4.8 9
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
lineage4.1.3 3
lineage4.1.2.1 17
lineage4.1.2 3
lineage4.8.1 2
lineage4.2;lineage4.9 3
lineage1.2.2.2 2
lineage2.1 5
lineage2.1;lineage4.9;lineage6.3 10
lineage4.3.4.2.1 7
La3 2
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7.1 1
lineage1.1.1;lineage4 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.1.2 3
lineage4.9;lineage6.3 6
26
La3;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage3 11
lineage1.1.2 2
lineage3.1.2.1;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.1.2.1.1 1
lineage6.1.1 2
lineage4 6
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1;lineage4 1
lineage4.6.1.1 6
lineage4.3.3 4
La1;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.1 2
lineage3.1 2
lineage3.1.2.2 1
lineage5.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.8 2
La2;lineage4.9;lineage9 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 2
lineage4.3.4.1 2
lineage4.1 1
La3;lineage4.8 2
La3;lineage2.1;lineage4.9 2
La3;lineage2.2.1 1
lineage4.1.1.3 2
lineage6.1.3 2
lineage2.2 4
lineage2.1;lineage6.3 2
lineage6.3.1 1
lineage2.2.1.1 1
La3;lineage1.1.2 1
lineage3;lineage4 1
lineage4.9;lineage9 3
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.1 1
lineage4.3.2.1 2
La3;lineage2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
lineage3.1.2 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage3.1.2.1 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 366
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045371 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
ERR363498 Other lineage4.9 None
SRR6785268 Sensitive lineage4.2.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR26399255 Sensitive lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR12006550 Other lineage1.2.1.2 None
SRR1165699 Other lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
SRR10315556 Sensitive lineage2.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR11049020 Other lineage4.8 None
ERR363445 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
ERR11081258 Other lineage4.8 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR21469202 Other La1.7.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR363479 Other lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369159 Other lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1173363 Other None
ERR9786843 Other None
SRR1184372 MDR-TB None
ERR234659 HR-TB None
ERR2514692 Other None
ERR987722 MDR-TB None
ERR245716 Sensitive lineage2.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 HR-TB lineage3 None
ERR4819357 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR3675549 Other lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR6785413 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR6359070 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787014 RR-TB lineage6.1.1 None
ERR4816964 HR-TB lineage4.9 None
SRR3675265 Other lineage4 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1173633 Other lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR751401 MDR-TB lineage4.3.3 pe
SRR23961542 Other La1;lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173778 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR6045817 Sensitive lineage4.8 gb
ERR373946 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6044983 Other lineage3.1.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1049751 RR-TB lineage4.6.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1062895 Sensitive lineage4.6.1.1 None
ERR349299 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4820854 Other lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR4821007 Other lineage1.2.2.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1196566 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
SRR21732980 Other lineage4.3.3 None
SRR6046863 Sensitive lineage1.1.2 None
ERR11466174 Other lineage4.8 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR3675541 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR9786440 Other lineage4.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR12015083 Other La3;lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4821408 Sensitive lineage4.1.2 None
SRR1049723 MDR-TB lineage4.6.1.1 None
ERR363447 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR2514351 Sensitive lineage3 gb
ERR9787165 Other lineage6.1.3 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR363446 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR1175074 Other None
ERR9786604 Other None
SRR25827682 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR4817060 Other None
SRR28119777 Other lineage4.9 None
ERR349300 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4819948 Other lineage4.4.1.1 None
ERR373945 Other lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR2512986 Other lineage3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
SRR3675292 Sensitive lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR349296 Sensitive lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
ERR363474 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR1172310 MDR-TB lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR4821747 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR867573 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675232 Other lineage4.1.2.1 None
SRR17832802 HR-TB lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR1049630 MDR-TB lineage4.4.1.1 None
ERR502912 Other lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819528 RR-TB lineage3 None
ERR349330 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4821746 Sensitive lineage4.4.1.1 gb
SRR6789621 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR11049143 Sensitive lineage4.1.2.1 None
SRR1184294 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4829333 Other lineage4 None
ERR4829039 RR-TB lineage4.3.1 None
SRR1172728 RR-TB La3 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR373947 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
ERR363500 Other lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR2509886 Other lineage3 None
ERR6865513 Other lineage4.1.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1735598 RR-TB lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4769442 Sensitive lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR7496509 Other None
SRR3675572 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR4815604 Other None
SRR28351442 HR-TB lineage3.1 None
ERR9117709 Other None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
ERR4816999 Other None
SRR1196583 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR9786515 Other lineage4.1.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR1049629 MDR-TB lineage4.4.1.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR1710057 Other lineage2.1 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786076 Other lineage3 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR1169194 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4178309 Other lineage4.1.2.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR990545 RR-TB lineage3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818536 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR7069800 Other lineage3.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR349265 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR6865502 Sensitive lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR4769457 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR1196474 Other lineage3.1.1 None