Rv0668 - c.1224C>T


Drug resistance types
76 Sensitive 21 RR-TB 43 HR-TB 44 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 189 Other
lineage Counts
lineage Count
26
lineage4.9 103
lineage2.2.2 4
lineage4.8 9
lineage4.9;lineage9 3
lineage4.1.1.1 4
lineage4.4.1.1 10
lineage4.1.2.1 17
lineage3.1.1 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1 24
lineage4.3.3 4
lineage1.1.3.2 1
lineage4.3.2 1
lineage4.2.1 2
La2;lineage4.9;lineage9 1
lineage1.2.2.2 2
lineage4 6
lineage4.1.3 3
lineage3 11
M.canetti;lineage2.1;lineage4.9 2
lineage5.2 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 2
La3 2
lineage2.1;lineage4.9 14
lineage4.9;lineage6.3 8
lineage2.1;lineage4.9;lineage6.3 10
La3;lineage4.8 2
lineage3.1 2
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.1.1 6
lineage2.2.1.1 1
La1.7.1 1
lineage1.1.1;lineage4 1
lineage4.6.1.2 3
lineage2.1 5
lineage4.3.4.2.1 7
lineage4.3.2;lineage4.9 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
lineage4.2;lineage4.9 3
lineage4.8.1 2
lineage3.1.2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
La3;lineage2.2.1 2
lineage6.1.3 2
La3;lineage4.9 4
lineage4.7 1
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La2;lineage4.9 1
lineage2.2 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
La1;lineage4.9 1
lineage4.1.1.3 2
lineage4.3.1 1
lineage4.3.4.1 2
lineage4.3.2.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.1 2
lineage4.6.2.2 3
lineage4.1;lineage4.8 2
lineage1.2.1.2 1
La1.2.BCG;La1.8.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.1;lineage6.3 2
lineage1.1.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
lineage3.1.2.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.3.4.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1 1
lineage4.1.2 3
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
lineage2.2.1;lineage4 1
lineage3;lineage4 1
lineage3.1.2.1 1
lineage3.1.2 1
lineage4.1.2.1.1 1
spoligotype Counts
spoligotype Count
None 383
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815604 Other None
ERR4816964 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6045817 Sensitive lineage4.8 gb
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
ERR6865513 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR6359074 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR11349186 MDR-TB lineage4.3.3 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675236 Other None
ERR9117805 Other lineage4.3.2 None
SRR6785268 Sensitive lineage4.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4797201 Other lineage1.2.2.2 None
ERR363499 Sensitive lineage4.9 None
ERR4829333 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4819528 RR-TB lineage3 None
ERR6358951 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR369160 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
SRR28351442 HR-TB lineage3.1 None
SRR26399255 Sensitive lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1062895 Sensitive lineage4.6.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR2514351 Sensitive lineage3 gb
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7821163 Other lineage2.2.1 None
ERR2509886 Other lineage3 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR21469202 Other La1.7.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
ERR2514692 Other None
ERR212001 HR-TB None
SRR28119805 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR4818536 Other lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR363446 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR4815471 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR363500 Sensitive lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29051093 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR4819357 Sensitive lineage4.9 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
ERR12015086 RR-TB lineage4.8 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675292 Sensitive lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11049143 Sensitive lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR2512986 Other lineage3 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
SRR3675577 Sensitive lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR6865502 Sensitive lineage4 None
ERR4816999 Other None
SRR29051077 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR349299 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR11466174 Other lineage4.8 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR990545 Other lineage3 None
ERR11465025 Other lineage4.1.1.3 None
SRR1165699 Other lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
SRR3675541 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR702406 Other lineage2.1 None
SRR3675549 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1049723 MDR-TB lineage4.6.1.1 None
ERR363447 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR867573 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR502912 Other lineage2.2.1 None
ERR3797070 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR6359070 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1735598 RR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR987722 MDR-TB None
ERR4817060 Other None
SRR28119752 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR349264 Sensitive lineage4.9 None
ERR4821007 Other lineage1.2.2.2 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR17832802 HR-TB lineage3 None
ERR867570 RR-TB lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR369162 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR369163 Sensitive lineage4.9 None
SRR1175074 Other None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1140723 Sensitive lineage4.6.1.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6046863 Sensitive lineage1.1.2 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR6046897 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR29016901 Other La3;lineage4.9 None
SRR6789626 Other None
ERR4178226 Sensitive lineage4 None
ERR4769457 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR6359069 Sensitive lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR2514552 Sensitive lineage3 None
SRR3675260 Sensitive lineage4.9 None
ERR3283044 Other lineage4 None
ERR11049020 Other lineage4.8 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR4821746 Sensitive lineage4.4.1.1 gb
ERR5336148 Other lineage2.1;lineage6.3 None
ERR751401 MDR-TB lineage4.3.3 pe
SRR7496509 Other None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR363456 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR11252664 Other lineage2.2.1 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR245716 Sensitive lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR11342671 RR-TB lineage4.1.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR29231479 RR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR4821747 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1173633 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1173363 Other None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6785413 Other lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR1049629 MDR-TB lineage4.4.1.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363453 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR11342658 RR-TB lineage4.1.2 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4818393 RR-TB lineage3;lineage4 None
SRR1169194 Other lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
ERR4821408 Sensitive lineage4.1.2 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR6044983 Other lineage3.1.1 None
ERR363506 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None