Rv0668 - c.1224C>T


Drug resistance types
79 Sensitive 33 RR-TB 99 HR-TB 49 MDR-TB 22 Pre-XDR-TB 0 XDR-TB 146 Other
lineage Counts
lineage Count
97
lineage4.3.4.1 2
lineage4.8 11
lineage4.9 44
lineage4.1.1.3 4
lineage4.1.2.1 21
lineage4.4.1.1 10
lineage4 52
lineage4.1.3 2
lineage6.1.1 2
lineage1.1.2 4
lineage3.1.2 2
lineage1.2.2.2 2
lineage2.2.1 34
lineage2 3
lineage3 22
lineage4.8;La3 2
La1.2 1
lineage4.3.4.2.1 6
lineage1.1.3.2 1
lineage4.3.2 1
lineage5.2 2
lineage4.6.2.2 4
lineage4.1 2
lineage4.8;lineage4.1 2
lineage4.1.1 3
lineage4.7 3
lineage6 2
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2 12
lineage2.2.2 6
lineage2.2.2;lineage2.2.1 1
lineage4.5 3
lineage4.6.1 4
lineage4.6.1.2 4
lineage4.6.1.1 3
lineage4.3.3 7
lineage4.6.1;lineage3.1.1 1
lineage3.1 3
lineage1.2.1.2 1
lineage2.1 2
La1.7.1 2
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage4.1.1.1 1
lineage4.9;La1 1
lineage6.3;lineage2.2.1 1
lineage4.2.2.2;lineage2.2.1;lineage1.1.2 1
lineage3;lineage2.2.1 1
lineage4.1.2 4
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 2
lineage1.2.1.1 1
lineage4.2.1.1 1
lineage4.1;lineage1 1
lineage4.3.4.2 1
La1.8.1 1
lineage1 1
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage4.3.2.1 2
lineage3.1.1 2
lineage4.9;lineage3.1.2.1 1
lineage3.1.2.2 1
lineage4.1.3;lineage1.1.2 1
lineage4.9;lineage4.2.1 1
lineage4.2.1 3
lineage2.2.1.1 1
lineage4.3.1 1
lineage4.1.2.1.1 1
La2 1
spoligotype Counts
spoligotype Count
None 428
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7496509 Other None
SRR7496517 Other None
ERR11466499 Other lineage4.3.4.1 None
ERR11466174 Other lineage4.8 None
SRR7585435 Other lineage4.9 None
ERR323043 HR-TB None
ERR323053 HR-TB None
ERR323039 HR-TB None
ERR1035157 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR12015084 Other lineage4.8 None
ERR11049020 Other lineage4.8 None
ERR11049143 Sensitive lineage4.1.2.1 None
ERR4821746 Sensitive lineage4.4.1.1 gb
ERR3283027 HR-TB None
ERR12015086 Other lineage4.8 None
ERR349265 Sensitive lineage4 None
ERR3283036 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR4769457 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR3797069 Other None
ERR3799304 Other lineage6.1.1 None
ERR400336 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR4769442 HR-TB lineage4 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4769554 RR-TB lineage4.9 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR2514351 Sensitive lineage3 gb
ERR4798504 Other lineage3 None
ERR4798431 HR-TB None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR12015083 Other lineage4.8;La3 None
ERR702406 HR-TB None
ERR6198317 Other La1.2 None
ERR6358951 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR702404 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR736865 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR7821123 Other lineage1.1.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786076 Sensitive lineage3 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
ERR9787014 Other lineage6.1.1 None
ERR9787336 Other lineage6 None
ERR990545 Other lineage3 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
SRR1013578 MDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013597 HR-TB lineage2.2 None
SRR1013607 HR-TB lineage2.2 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048885 MDR-TB None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048996 HR-TB lineage4.5 None
SRR1049023 HR-TB lineage2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR1049041 MDR-TB None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049723 MDR-TB lineage4.6.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1062895 Other lineage4.6.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1062927 MDR-TB lineage4.6.1 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140736 RR-TB None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1172817 HR-TB None
SRR1144809 HR-TB lineage2.2.1 None
SRR1169194 Other None
SRR1172214 HR-TB lineage4.9 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172234 Other None
SRR1172310 HR-TB None
SRR1172728 MDR-TB None
SRR1173166 Other lineage4.9 None
SRR1173153 HR-TB None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173118 Other None
SRR1173562 HR-TB lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173384 Other lineage4 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173484 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1173629 Other None
SRR1173778 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1181289 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1181020 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR17832802 HR-TB lineage3 None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12006550 Other lineage1.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13837502 Sensitive lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18003019 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR20969731 Other lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR19303884 HR-TB None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969677 HR-TB lineage2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR25827682 Other None
ERR11081257 Other lineage4.8 None
SRR21277755 Sensitive lineage4.5 None
SRR21469202 Other La1.7.1 None
ERR11068570 Other lineage4 None
SRR21469201 Other La1.7.1 None
ERR11081258 Other lineage4.8 None
SRR26159043 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26399973 Other lineage4.9;La3 None
SRR26399255 Sensitive lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961542 Other lineage4.9;La1 None
SRR3675465 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827452 MDR-TB lineage4.2.2.2;lineage2.2.1;lineage1.1.2 None
ERR4815604 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR3675472 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3416776 Other lineage2.1 None
ERR4814496 RR-TB lineage4.1.2 None
SRR6045817 Sensitive lineage4.8 gb
ERR4814352 HR-TB lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675209 Sensitive lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675221 HR-TB None
ERR4814683 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
ERR4815471 Other lineage4.9 None
SRR3675230 RR-TB lineage3 None
SRR3675236 HR-TB None
SRR3675265 Other lineage4 None
SRR3675261 Other lineage1.2.1.1 None
ERR4814841 Other lineage4.1 None
ERR2229542 Other lineage4.8 None
SRR3675292 Sensitive lineage4 None
ERR176740 HR-TB None
ERR4816964 Other lineage4.9 None
SRR3675283 Sensitive lineage4.9 None
SRR3675311 Other None
SAMN02381005 Other lineage4.6.1.1 None
SAMN02381037 MDR-TB lineage4.6.1 None
SRR3675412 Sensitive lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR3675510 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR4816999 Other None
ERR4816100 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
ERR2027290 RR-TB lineage3.1 None
ERR4816113 Sensitive lineage4.1.1 None
ERR2027263 Other lineage4 None
ERR212001 HR-TB None
ERR4816184 Other lineage4.1.2.1 None
ERR4817037 Other lineage4.9 None
SRR3675552 RR-TB lineage4.9 None
SRR3675572 Other None
ERR4817060 RR-TB None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR3675574 HR-TB None
SRR3675577 Sensitive lineage4.9 None
SRR3742665 HR-TB None
ERR4816466 HR-TB None
ERR216965 HR-TB lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675571 HR-TB None
ERR4816604 RR-TB lineage4.1.2 None
ERR4816585 Other lineage2.2 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR502912 Other lineage2.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4815811 HR-TB lineage4.2.1.1 None
ERR4817893 Other lineage4.8;La3 None
ERR4817735 Other lineage4.8 None
ERR2512986 Other lineage3 None
ERR4819068 Sensitive lineage4.1;lineage1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4818710 Sensitive lineage4.9 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR7496472 Other None
ERR4817998 Other lineage3 None
ERR234659 HR-TB None
ERR4818021 Other La1.8.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4818126 RR-TB lineage1 None
ERR245716 Sensitive lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
ERR4818347 Other lineage4.1.2 None
ERR4818393 RR-TB lineage3 None
ERR4818615 Other None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2509886 RR-TB lineage3 None
ERR4818536 Other lineage4.9 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4820266 RR-TB lineage3 None
SRR5007204 Other lineage4.1.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4819280 Sensitive lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819357 Other lineage4.9 None
ERR4819528 RR-TB lineage3 None
ERR4819462 Other lineage4 None
ERR4820746 RR-TB lineage3 None
ERR2514552 Sensitive lineage3 None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
ERR4819932 Other lineage4.7 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
ERR4819933 Other lineage4.9 None
ERR2514692 Other None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4819948 Other lineage4.4.1.1 None
ERR4820833 HR-TB None
SRR5341333 HR-TB None
ERR2515032 Other lineage3 None
ERR751401 MDR-TB lineage4.3.3 pe
ERR4821408 Sensitive lineage4.1.2 None
ERR4820151 RR-TB lineage4.8 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR6046117 RR-TB lineage4.9 None
ERR4821007 RR-TB lineage1.2.2.2 None
SRR5341470 HR-TB None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
ERR4821915 RR-TB lineage4.9 None
ERR4822104 RR-TB lineage3 None
SRR6044790 HR-TB None
ERR4822222 Other lineage3.1.2.2 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045706 Sensitive lineage4 None
ERR4822101 Sensitive lineage4.1.3;lineage1.1.2 None
ERR2693227 Other lineage4.9 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6044855 Other lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046020 Other lineage3 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046305 Other lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6046397 Other None
ERR4829333 RR-TB lineage4 None
SRR6046540 HR-TB None
SRR6046802 Other lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR4831638 Sensitive None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR502524 HR-TB La2 None
SRR6785262 Sensitive lineage4.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
ERR294266 HR-TB None
SRR6785413 Other lineage2.2.1 None
SRR6789626 Other None
ERR502943 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
ERR502532 HR-TB None
SRR8217918 HR-TB None
SRR7131023 Other lineage4.1.2.1 None