EBG00000313339 - n.901G>A
Drug resistance types
48 Sensitive
58 RR-TB
29 HR-TB
62 MDR-TB
32 Pre-XDR-TB
1 XDR-TB
296 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 6 |
| lineage2.2.1 | 88 |
| lineage4.9 | 50 |
| lineage4 | 23 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.3 | 16 |
| lineage4.1.2.1 | 40 |
| lineage4.1.1.3 | 16 |
| lineage3 | 26 |
| 7 | |
| lineage4.1.1.2 | 1 |
| lineage4.6.5 | 3 |
| lineage4.6.2.2 | 5 |
| lineage4.3.2 | 3 |
| lineage4.3 | 1 |
| lineage1.2.2.2 | 6 |
| lineage3.1.3 | 3 |
| lineage4.7 | 7 |
| lineage4.3.4.2 | 8 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1 | 17 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1 | 5 |
| lineage4.1.2 | 10 |
| lineage4.2.2.2 | 4 |
| lineage4.8.1 | 3 |
| lineage4.6.1 | 1 |
| lineage4.8 | 55 |
| lineage3.1.1 | 6 |
| lineage4.4.2 | 4 |
| La2 | 1 |
| lineage4.3.4.1 | 7 |
| La1.8.1 | 11 |
| lineage2.2.2 | 7 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage2.2.1.1 | 5 |
| lineage2.2 | 4 |
| lineage4.2.2 | 1 |
| lineage4.5 | 2 |
| lineage4.1.1.3.1 | 5 |
| lineage6 | 2 |
| La1.7.1 | 3 |
| lineage6.1.1 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.8;lineage4.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage5 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.6 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.3.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1.2 | 2 |
| lineage1.1.2 | 6 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.4 | 1 |
| lineage3.1.2.2 | 3 |
| lineage4.9;lineage3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage6.3.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.4 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 526 |
Geographic prevalence
Country level data for this variant is available for 54 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4276853 | MDR-TB | lineage4.2.1 | None | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR5863736 | MDR-TB | lineage2.2.1 | None | ERR4812474 | Sensitive | lineage4.3.3 | pe | ERR5863990 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5864324 | MDR-TB | lineage2.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR5917683 | Sensitive | lineage4.1.2.1 | by | ERR6052035 | Sensitive | lineage4.1.1.3 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR9117728 | Other | lineage3 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6358979 | Other | None | ERR736816 | Other | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11349181 | Other | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1172282 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16370621 | Sensitive | lineage4.1.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16370646 | HR-TB | lineage2.2.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002877 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002938 | Sensitive | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002977 | Sensitive | lineage2.2.1.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303899 | Other | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR19317519 | Sensitive | lineage4.1.2.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21726726 | Sensitive | lineage4.1.2.1 | None | ERR4815236 | Sensitive | lineage2.2.1 | gb | ERR2229577 | Sensitive | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4815299 | Other | lineage4.8 | gb | ERR4814362 | Other | lineage4.8 | None | ERR3275344 | Sensitive | lineage4.8 | nl | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814656 | Other | None | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR1750889 | Other | lineage4.4.1.1 | None | SRR3675227 | Other | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | SRR3675288 | Other | lineage3 | None | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR1750930 | Sensitive | lineage4.1.1.3 | za | SRR3675239 | Sensitive | lineage4.3.4.1 | gb | ERR1750916 | Other | lineage2.2.1.1 | None | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | ERR4815787 | Other | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR176605 | HR-TB | lineage4.3.4.2.1 | mw | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814938 | Other | lineage4.3.2.1 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR2229810 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR2228965 | Other | lineage4.8 | None | SRR3675509 | Other | lineage4.9 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675533 | Sensitive | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675513 | Other | lineage4.8 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4816079 | Sensitive | lineage4.1.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR3675565 | Other | lineage3 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR2229136 | RR-TB | lineage4.8 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR2229148 | Other | lineage4.8 | dk | ERR2229147 | Other | lineage4.8 | None | ERR4817121 | Sensitive | lineage3 | None | ERR2229204 | Other | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229325 | Other | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816699 | Other | lineage4.6 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2228890 | Other | lineage4 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | SRR4033523 | Other | lineage2.2 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228910 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818285 | HR-TB | lineage4.1.2.1 | None | ERR4818696 | Other | lineage4.8 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4817780 | Other | lineage4.7 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818370 | Other | lineage4.1.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818574 | Other | lineage6 | None | SRR5007199 | Other | lineage4.1.2.1 | None | SRR5007172 | Sensitive | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4819093 | Other | lineage4.3.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SAMEA2535154 | HR-TB | lineage2.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819525 | Other | lineage3 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820341 | Sensitive | lineage4.8 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819734 | RR-TB | lineage3 | gb | ERR4820815 | Other | lineage1.1.3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820133 | Sensitive | lineage1.1.3.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4820060 | Other | lineage4.3.3 | None | ERR4820666 | Other | lineage4.8 | gb | SRR6046087 | Other | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR270777 | HR-TB | lineage4.1.2 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4822282 | Sensitive | lineage4.8.2 | gb | ERR4821276 | Other | lineage3 | None | ERR4821404 | HR-TB | lineage1.2.1.2.1 | gb | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821409 | Other | lineage4.8 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821761 | Other | lineage3 | gb | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045705 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045726 | Other | lineage3 | None | SRR6045713 | Sensitive | lineage3.1.3 | gb | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045743 | Other | lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818660 | Sensitive | lineage4.1.1.3 | dj | SRR6044769 | Other | lineage1.1.2 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045952 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046016 | Other | lineage4.3.1.1 | gb | SRR6045022 | Other | lineage3.1.1 | None | SRR6045958 | Other | lineage3 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046020 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045243 | Sensitive | lineage4.1.1 | gb | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6045365 | Other | lineage3 | gb | SRR6045295 | Other | lineage4.7 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045379 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046398 | Other | lineage4.1.1.3.1 | gb | ERR4828940 | Sensitive | lineage4.1.2.1 | it | ERR2446082 | Sensitive | lineage4.8 | nl | ERR4828879 | MDR-TB | lineage3 | None | ERR4828998 | MDR-TB | lineage4.8 | it | ERR4828984 | MDR-TB | lineage4.1.2.1 | it | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046442 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046517 | Other | lineage4.8 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046729 | Other | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046790 | Other | lineage4.7 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6046848 | Other | lineage4.6.5 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046907 | Other | lineage4.9 | None | SRR6397359 | Other | lineage4.3.2 | ca | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6398010 | Sensitive | lineage4.2.1 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6964650 | Sensitive | lineage3 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131014 | Sensitive | lineage4.1.2.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131032 | Other | lineage2.2.1 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5087500 | Other | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131146 | Sensitive | lineage4.6.2.2 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131155 | Sensitive | lineage4.7 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131288 | Other | lineage4.6.2.2 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7517748 | HR-TB | lineage4.4.1.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971070 | MDR-TB | lineage4.8.1 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | ERR019855 | Other | lineage3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR036207 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796592 | Other | lineage4 | None | ERR10796588 | Other | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796635 | Other | lineage4 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None |
|---|
