Rv0668 - c.279C>T
Drug resistance types
8 Sensitive
12 RR-TB
14 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| 9 | |
| lineage3.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1 | 1 |
| lineage3 | 6 |
| lineage4.9 | 8 |
| lineage4.3.3 | 3 |
| lineage2.2.1 | 14 |
| lineage4.1.3 | 1 |
| lineage4.8 | 3 |
| lineage4 | 4 |
| lineage4.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.3 | 4 |
| lineage4.6.5 | 2 |
| lineage4.9.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.2 | 1 |
| lineage2.2 | 1 |
| La1.7.1 | 2 |
| lineage4.9;La1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212121 | HR-TB | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821492 | HR-TB | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR4821409 | Other | lineage4.8 | None | SRR6044936 | Other | lineage4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045289 | Other | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046225 | HR-TB | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046815 | Other | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | SRR6789614 | Other | lineage4.3.2.1 | None | SRR7496471 | Sensitive | None | ERR1023525 | HR-TB | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796627 | Other | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR3445503 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR4769514 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR23961549 | Other | La1.2 | None | ERR4817355 | Sensitive | lineage1.1.3.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814878 | Sensitive | lineage4.8 | None | ERR176751 | HR-TB | None | ERR4815909 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None |
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