Rv0668 - c.279C>T
Drug resistance types
5 Sensitive
6 RR-TB
14 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 12 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 5 |
| lineage4.1.1.3 | 1 |
| lineage3 | 4 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.6.2.2 | 1 |
| La1.3 | 1 |
| 1 | |
| lineage4.3.4.2 | 1 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.9.1 | 1 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.5 | 2 |
| lineage4 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7.1 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR2512606 | HR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4769514 | Other | La1.3 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR212001 | HR-TB | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR245758 | Other | lineage4.9.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342646 | HR-TB | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR7070223 | HR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR867575 | Other | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR176751 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR23961549 | Other | La1.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None |
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