EBG00000313339 - n.2344T>C
Drug resistance types
39 Sensitive
85 RR-TB
35 HR-TB
102 MDR-TB
40 Pre-XDR-TB
1 XDR-TB
314 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 39 |
| lineage2.2 | 3 |
| lineage3 | 41 |
| lineage4.1.1.3 | 17 |
| lineage4 | 21 |
| lineage2.2.1 | 107 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1.2.1 | 27 |
| lineage4.3.3 | 21 |
| 16 | |
| lineage4.1 | 2 |
| lineage2.2.1.1 | 7 |
| lineage4.6 | 2 |
| lineage4.9 | 88 |
| lineage1.2.2.2 | 7 |
| lineage5 | 1 |
| lineage1.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.4.1.1 | 14 |
| La1.8.2 | 1 |
| lineage3.1 | 2 |
| lineage4.2.2.1 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage4.5 | 2 |
| lineage4.7 | 6 |
| lineage3.1.1 | 13 |
| lineage3.1.2.1 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.1.2 | 6 |
| lineage2.2.2 | 9 |
| lineage1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.2 | 7 |
| lineage1.1.2 | 6 |
| lineage4.3.2 | 5 |
| lineage4.1.1.3.1 | 4 |
| lineage4;lineage3 | 1 |
| lineage4.8.2 | 3 |
| lineage4.3.4.1 | 7 |
| lineage4.6.2.2 | 8 |
| lineage3.1.2 | 3 |
| lineage1.1.1 | 1 |
| La3 | 1 |
| lineage4.3.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 6 |
| lineage1.1.3.1 | 3 |
| lineage3.1.3 | 2 |
| lineage4.2.1 | 12 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.1.1 | 5 |
| lineage4.4 | 2 |
| lineage4.8.1 | 3 |
| lineage3.1.2.2 | 3 |
| lineage4.3.1 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.6.5 | 2 |
| lineage5.1.1 | 2 |
| La1.8.1 | 12 |
| lineage4.3 | 2 |
| lineage4.3.4.2 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage6 | 2 |
| La1.3 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage2 | 1 |
| La2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 616 |
Geographic prevalence
Country level data for this variant is available for 47 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815278 | Other | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815408 | Sensitive | lineage3 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR3675265 | Other | lineage4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814671 | Other | lineage3 | gb | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1750907 | RR-TB | None | ERR1750943 | Sensitive | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675282 | Other | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814905 | Other | lineage4.8 | gb | SRR3675288 | Other | lineage3 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR4815949 | Sensitive | lineage2.2.1 | gb | ERR4815556 | RR-TB | lineage3 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675513 | Other | lineage4.8 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675555 | HR-TB | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4817110 | Other | lineage4.1.1.3 | None | ERR4817060 | RR-TB | None | SRR3675565 | Other | lineage3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817069 | RR-TB | None | ERR2229760 | Other | lineage4.8 | dk | ERR4816464 | Other | lineage3 | None | ERR4816545 | Other | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229197 | Sensitive | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR5818386 | Other | None | ERR4816800 | Other | lineage4.8 | gb | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR2179696 | Sensitive | lineage4.4.2 | cn | ERR4818126 | RR-TB | lineage1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818538 | Other | lineage3 | gb | ERR4818431 | Other | lineage1.1.2 | gb | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2512850 | Sensitive | lineage4.9 | gb | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819171 | Sensitive | lineage1.2.2.2 | gb | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4819206 | Other | lineage4.8 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820324 | Other | lineage4 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4820492 | Other | lineage2.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR1023509 | Other | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4820652 | Other | lineage1.1.1 | gb | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4820161 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821802 | Other | La3 | gb | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046087 | Other | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045485 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821139 | Other | lineage4.8 | gb | ERR4821276 | Other | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821725 | Other | lineage4.8.2 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821519 | Other | lineage3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR5818385 | Other | lineage4.9 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR6046210 | Other | lineage4 | None | SRR5818648 | Sensitive | lineage4.2.2.2 | dj | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045876 | Other | lineage3 | gb | SRR6044784 | MDR-TB | lineage3 | None | SRR6044774 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045910 | Other | lineage3.1 | None | SRR6044896 | Other | lineage4.8 | gb | SRR6044904 | Other | lineage3 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6046173 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044957 | Other | lineage4.8.2 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045178 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045325 | Other | lineage4.8.1 | gb | SRR6045396 | Other | lineage4.3.1.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830711 | Sensitive | lineage4.3.3 | dz | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046442 | Other | lineage3 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046753 | Sensitive | lineage3.1.3 | gb | SRR6046779 | Other | lineage4.1.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982324 | Sensitive | lineage3.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5087846 | Other | La1.8.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR9971112 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR036207 | Other | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796629 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468776 | Other | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR387051 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769453 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR6197034 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117788 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117759 | Other | lineage3 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117799 | Sensitive | lineage4.8 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117822 | Sensitive | lineage4.1.2.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315472 | MDR-TB | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349189 | MDR-TB | lineage4.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180252 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR12199485 | Other | lineage2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16149117 | MDR-TB | lineage4.2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735585 | Sensitive | lineage3 | None | SRR1792011 | Other | La1.8.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913779 | Other | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21728727 | Sensitive | lineage1.2.2.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22048550 | Other | lineage1.1.3.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815104 | Other | lineage4.8 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None |
|---|
