Rv0668 - c.1179G>T
Drug resistance types
16 Sensitive
13 RR-TB
11 HR-TB
12 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.9 | 18 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.2.1 | 5 |
| 2 | |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8 | 2 |
| La1.8.1 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1 | 3 |
| La1.7.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.2.1.2.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.1.3.2;lineage4 | 1 |
| lineage5 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage6 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815556 | RR-TB | lineage3 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR551931 | Sensitive | lineage4.1.2.1 | de | ERR4817664 | Sensitive | lineage4.1.2.1 | gb | ERR4796577 | HR-TB | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR6358979 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR5087846 | Other | La1.8.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4821276 | Sensitive | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR25515733 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR11049390 | Sensitive | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR25515498 | MDR-TB | lineage2.2.1 | None | ERR4817069 | RR-TB | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4817171 | RR-TB | lineage4.1.2.1 | gb | ERR4816322 | Other | lineage4.9 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046839 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR181750 | Sensitive | lineage1.1.3.2;lineage4 | None | ERR4816967 | Other | lineage5 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None |
|---|
