Rv0668 - p.Leu405Met
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
33 Sensitive
66 RR-TB
7 HR-TB
61 MDR-TB
21 Pre-XDR-TB
2 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.1 | 8 |
| lineage2.2.1 | 43 |
| lineage4.3.3 | 9 |
| lineage4.2.1 | 7 |
| lineage3 | 16 |
| lineage4.1.2.1 | 7 |
| lineage1.1.3.2;lineage4 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.6.1.2 | 9 |
| lineage4.3.4.2.1 | 9 |
| lineage1.2.1.2.1 | 1 |
| La1.3 | 3 |
| lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.9 | 41 |
| lineage1.2.1.1 | 1 |
| La1.8.1 | 8 |
| lineage4.7 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3 | 6 |
| lineage4.1.2 | 4 |
| lineage4.8.1 | 3 |
| lineage4.8 | 16 |
| lineage4.3.2.1 | 3 |
| La2 | 1 |
| La1.6 | 1 |
| lineage3.1.1 | 4 |
| La1.7.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage2.2.2 | 6 |
| lineage3;lineage4 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| 2 | |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.6.5 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage5 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 262 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062927 | MDR-TB | lineage4.6.1.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2;lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR1049743 | Sensitive | lineage4.6.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR4769423 | Other | La1.3 | None | ERR4811708 | HR-TB | lineage4 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4821276 | Sensitive | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR13888750 | Other | La2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR6046376 | Other | lineage3 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4814748 | Other | lineage4.8 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4815556 | RR-TB | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4817069 | RR-TB | None | ERR4817060 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4820394 | Sensitive | lineage4.3.4.2.1 | None | SRR1140586 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049744 | Sensitive | lineage4.6.1.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821143 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR1049672 | Other | lineage3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4816967 | Other | lineage5 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4769517 | Other | La1.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR19303775 | Sensitive | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303774 | Sensitive | lineage4.1.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2509886 | Other | lineage3 | None | ERR5311087 | Other | La1.8.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1173281 | Other | lineage3 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821176 | Other | lineage2.2.1 | None | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | SRR1049736 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR5311084 | Other | La1.8.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None |
|---|
