EBG00000313339 - n.2306G>T


Drug resistance types
18 Sensitive 43 RR-TB 13 HR-TB 62 MDR-TB 29 Pre-XDR-TB 1 XDR-TB 222 Other
lineage Counts
lineage Count
lineage4.2.1.1 1
lineage2.2.1 72
lineage4.4.1.1 12
lineage4.8 20
lineage4.1.2.1 18
La1.8.1 10
lineage4.6.2.2 6
lineage4.3.3 12
lineage4.3.4.2 5
lineage4.9 51
lineage2.2.1.1 6
lineage4.1.1 4
lineage4.1.2 4
lineage6.2.3;lineage1.1.2 1
lineage4.2.1 4
lineage4.9;lineage4.1 1
lineage4.3.4.1 4
lineage4.9;lineage4.3.4 1
lineage4 17
11
lineage4.1.1.3 11
lineage4.9;lineage1.1 1
lineage4.3.4 1
lineage4.9;La1.8.1 1
lineage4.1.1.2 1
lineage4.2.2.1 2
lineage4.6 2
lineage1.1.1 1
lineage4.8.2 2
lineage1.2.2.2 4
lineage4.3 1
lineage3 24
lineage4.3.2 2
lineage4.3.1.1 4
lineage2.2 4
lineage4.7 3
lineage4.8;lineage4.3.3 4
lineage4.4.1.1.1 1
lineage4.9;lineage2.2.1 1
lineage2.2.2 5
lineage4.8.1 3
lineage4.2.2.2 3
lineage4.4.2 4
lineage2 1
lineage3.1.1 6
lineage2.2.2;lineage2.2.1 1
lineage4.2.2 1
lineage4.5 1
lineage4.1 1
lineage6 1
La1.7.1 3
lineage1.1.3.1 1
lineage4.9;lineage3.1.1 1
lineage1.1.2 4
lineage3.1 2
lineage1.2.1.1 1
lineage4.8;lineage4.2.1.1 1
lineage4.3.4.2.1 2
lineage3.1.2.1 1
lineage4.1.1.3.1 3
lineage4;lineage3 1
lineage6.1.3 1
lineage3.1.3 1
lineage4.2.2.2;lineage3 1
lineage4.4 1
lineage3.1.2.2 2
lineage3.1.2 1
lineage1.1.3.3 1
lineage4.6.3 1
lineage4.6.5 1
lineage4.1.2.1;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 388
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6785281 Other lineage4.2.1.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6896383 RR-TB lineage4.4.1.1 None
SRR7131028 Other lineage4.8 None
ERR3014599 Pre-XDR-TB lineage4.1.2.1 tn
ERR5087846 Other La1.8.1 None
SRR7131004 Other lineage4.6.2.2 None
ERR5087486 Other La1.8.1 None
ERR5087596 Other La1.8.1 None
SRR7131075 Other lineage4.8 None
SRR7131032 Other lineage2.2.1 None
SRR7131061 Other lineage2.2.1 None
SRR7131068 Other lineage4.8 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131161 Other lineage4.8 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131198 Other lineage4.3.3 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131234 Other lineage4.9 None
SRR7131233 MDR-TB lineage4.3.3 None
SRR7131237 Other lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971372 MDR-TB lineage4.1.1 None
ERR10219867 Sensitive lineage4.1.2 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR036198 Other lineage4.3.4.2 None
ERR036207 Other lineage4.9 None
ERR038289 Other lineage4.3.3 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796577 RR-TB lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796593 RR-TB lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796615 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR3283006 RR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796568 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796589 Other lineage4.9 None
ERR10796588 Other lineage4 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796629 Other lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR3439489 RR-TB La1.8.1 None
ERR3797068 Other La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR4187652 Other lineage4.9 None
ERR4811708 HR-TB lineage4 None
ERR4769553 RR-TB lineage4.9 None
ERR4187671 Other lineage4.9;La1.8.1 None
ERR6197034 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4812328 Other lineage4.3.3 pe
ERR6197042 RR-TB lineage4.9 None
ERR6197036 Other lineage4 None
ERR8975044 Other lineage4.1.1.2 None
ERR7737918 MDR-TB lineage4.2.2.1 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117695 Other lineage4.1.2.1 None
ERR9117704 Other lineage4.6 None
ERR9117744 Sensitive lineage1.1.1 None
ERR9117713 Sensitive lineage4.8.2 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117788 Other lineage3 None
ERR9117759 Other lineage3 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117805 Other lineage4.3.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117799 Sensitive lineage4.8 None
SRR1013527 RR-TB lineage2.2 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349195 MDR-TB lineage4.4.1.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1173185 HR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1173310 MDR-TB None
SRR1173719 HR-TB lineage3 None
SRR1175473 Other lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1183034 Sensitive lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1196478 MDR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR12199455 Other None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR12199485 Other lineage2 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14801720 RR-TB lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15508556 Other lineage4.3.4.1 None
SRR1735585 Sensitive lineage3 None
SRR16156751 RR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR1792011 Other La1.8.1 None
SRR1792012 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR17592370 Sensitive lineage4.9 None
SRR1792022 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002987 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002995 Other lineage4.4.2 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18002997 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003022 HR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003044 MDR-TB lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR19303817 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18572454 RR-TB lineage4.9 None
SRR18714882 MDR-TB lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR19303784 Other lineage4.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19303805 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303798 Sensitive lineage4.4.1.1 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303819 Other lineage4.6.2.2 None
SRR19303911 Sensitive lineage4.1 None
SRR19303899 Other lineage3 None
SRR19303907 Other lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19303985 Other lineage4.8 None
SRR19303949 Other lineage4.3.3 None
SRR19304035 Other lineage4.1.2.1 None
SRR19304094 Other lineage6 None
SRR19304083 Other lineage4.4.1.1 None
SRR19304109 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR21469202 Other La1.7.1 None
SRR2100067 Other lineage4.3.3 None
SRR21469201 Other La1.7.1 None
SRR21469200 Other La1.7.1 None
SRR21728727 Sensitive lineage1.2.2.2 None
SRR21727760 Other lineage2.2.1 None
SRR22048474 RR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22048550 Other lineage1.1.3.1 None
SRR22048536 Other lineage4.3.3 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4815158 Sensitive lineage4.9 None
SRR3675496 Other lineage4.1.1.3 gb
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR1750896 Sensitive lineage2.2.1 zw
ERR1665403 MDR-TB lineage2.2.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR1750916 Other lineage2.2.1.1 None
ERR1750907 RR-TB None
ERR1750932 Sensitive lineage4.1.2.1 za
ERR1750929 Sensitive lineage4.1.1.3 za
SRR3675513 Other lineage4.8 None
SRR3675509 Other lineage4.9 None
ERR1750943 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675282 Other None
SRR3675288 Other lineage3 None
SRR3675291 Sensitive lineage4.6 gb
ERR4816009 Other lineage1.1.2 None
ERR2027290 RR-TB lineage3.1 None
SRR3675547 Other lineage4.9 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027252 Other lineage4.8;lineage4.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2229760 Other lineage4.8 dk
ERR4817047 Other lineage4.2.2.1 gb
SRR3675565 Other lineage3 None
ERR212114 Other lineage4.3.4.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4818663 Other lineage3 None
ERR2229791 RR-TB lineage4.9 None
SRR5818386 Other None
SRR5007204 Other lineage4.1.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817915 RR-TB lineage4.9 None
ERR2510804 Other lineage2.2.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR6045424 Other lineage1.1.2 None
SRR5818458 Other None
ERR4820846 RR-TB lineage4.6.2.2 gb
ERR4820492 Other lineage2.2.1 None
SRR6046087 Other None
SRR6045464 Other lineage4.1.1.3 None
SRR6045445 Other lineage4.3.1.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045496 Other lineage6.1.3 None
ERR4821276 Other lineage3 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045553 RR-TB lineage4.9 None
SRR6045565 Other lineage4.6.2.2 None
SRR6046113 Other lineage4.1.1.3 None
SRR5818414 Other lineage4.9 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR5818385 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045614 Other lineage4.8 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR5818391 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818423 MDR-TB lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045749 Other lineage4.1.1 gb
SRR6046210 Other lineage4 None
SRR6045778 Other lineage3.1 None
SRR5818690 Other lineage4.2.2.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR6044769 Other lineage1.1.2 None
SRR6045876 Other lineage3 gb
SRR6044838 Other lineage4.9 None
SRR6044774 Other lineage3 None
SRR6044787 Other lineage4.4 None
SRR6044841 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044857 Other lineage4.8.1 gb
SRR6045909 Other lineage4.8 None
SRR6045928 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044957 Other lineage4.8.2 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044993 Other lineage3 None
SRR6044983 Other lineage3.1.1 None
SRR6046016 Other lineage4.3.1.1 gb
SRR6045017 Other lineage3.1.2.2 None
SRR6046173 Other lineage3 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045986 Other lineage3 None
SRR6045138 Other lineage3.1.1 None
SRR6045396 Other lineage4.3.1.1 None
SRR6046020 Other lineage3 None
SRR6045222 Other lineage4.1.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6045295 Other lineage4.7 None
SRR6046177 Other lineage3.1.2 None
SRR6045178 Other lineage3 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045325 Other lineage4.8.1 gb
SRR6045384 Other lineage4.1.2 None
SRR6046359 Other lineage4.7 None
SRR6046275 Other lineage3.1.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046343 Other lineage2.2.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046483 Other lineage4.6.3 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046482 HR-TB None
SRR6046558 Other lineage3 gb
SRR6046497 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046534 Other lineage1.1.2 None
SRR6046802 Other lineage4 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046729 Other None
SRR6046779 Other lineage4.1.2.1 gb
SRR6046848 Other lineage4.6.5 None
SRR6046815 Other lineage3 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR6398019 Sensitive lineage4.1.2 ca
ERR502470 RR-TB lineage4.9 None
SRR6046852 MDR-TB lineage3 None
ERR4863405 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None