EBG00000313339 - n.2341C>T


Drug resistance types
2 Sensitive 36 RR-TB 10 HR-TB 54 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 141 Other
lineage Counts
lineage Count
lineage4.1.2.1 10
lineage4.9 54
lineage3 13
lineage4.8.1 3
La1.8.1 8
lineage3;lineage4 1
lineage4.4.1.1 2
lineage2.2.1 58
lineage1.1.1 6
lineage4.1.1.3.1;lineage4.9 1
lineage4.3.3 8
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.6.1.1 1
lineage4.4.1.2 1
lineage3.1.1 4
lineage1.1.2;lineage6.2.3 1
lineage2.2.1.1 2
lineage4.1.1.1 4
lineage4.3.2.1 1
lineage4.8 14
lineage4.3.4.1 3
lineage4.3.4.2.1 6
lineage4.1.1.3 10
lineage4.4.1.1.1 2
lineage4.1.2.1;lineage4.4.1 1
lineage4.3.3;lineage4.8 4
lineage3.1.3 1
lineage4.3.4.2 2
lineage4.4.2 3
lineage2.2;lineage4 1
lineage4.1.3 1
lineage4.5 1
lineage3.1.1;lineage4.9 1
lineage4.7 2
lineage4.2.1 4
lineage1.1.3.1 1
lineage2.2.2 5
lineage1.1.1.1 1
La1.6 1
lineage4 1
lineage2.2.1;lineage4.9 1
lineage4.1.1.2 1
lineage4.2.2 1
La1.7.1 2
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.2.2.2 4
lineage3.1.2 1
lineage4.3.2 1
lineage6.1.3 1
La1.7;M.canetti;lineage4.9 1
lineage4.6.2.2 1
lineage4.2.1.1 1
lineage4.1.1.3.1 1
lineage1.2.1.1 1
lineage2.2.1;lineage4 1
lineage2.2.1;lineage4.8 1
lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 268
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5007204 Other lineage4.1.2.1 None
SRR1175474 Other lineage4.9 None
SRR6046020 Other lineage3 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR1792025 Other La1.8.1 None
ERR4820030 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR5818460 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR1792024 Other La1.8.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
ERR502474 RR-TB lineage4.9 None
ERR4830194 HR-TB lineage1.1.1 vn
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR6044838 Other lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR5818408 Other lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR3675389 Other lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR6045957 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR5007165 Other lineage3 None
SRR1180446 Other lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR6045384 Other lineage4.1.2.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR867569 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR7070144 Other lineage4.8 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR18002964 Other lineage2.2.1 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR6045613 Other lineage3.1.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1180440 Other lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR6046815 Other lineage3 None
SRR18002941 RR-TB lineage2.2.1 None
SRR1181256 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR6046117 Other lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
SRR5067597 Other lineage1.1.1 vn
SRR18003038 Other lineage2.2.1 None
SRR7131161 Other lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR7068885 Other lineage3 None
SRR5818449 MDR-TB lineage4.9 None
ERR867574 Other lineage4.9 None
SRR6046343 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR18002937 Other lineage2.2.1 None
SRR6046250 Other lineage4.9 None
SRR5818386 Other lineage4.9 None
SRR7070293 Other lineage4.8 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR4821769 Other lineage4.1.2.1 None
SRR7069835 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR11342646 HR-TB lineage3 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1140716 Other lineage3 None
SRR5818448 Other lineage4.9 None
SRR11342648 MDR-TB lineage4.1.1.3 None
DRR184982 Other lineage2.2.1 None
SRR19303907 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR3675509 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR5818459 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR18002980 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR18003032 Other lineage2.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR1173185 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR6045621 Other lineage4.1.1.3 None
SRR1792012 Other La1.8.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR1792011 Other La1.8.1 None
SRR5818452 Other lineage4.9 None
SRR18002987 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR6044952 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR5818395 Sensitive lineage4.9 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR502481 RR-TB lineage4.9 None
ERR3468613 Other La1.8.1 None
SRR3675265 Other lineage4 None
SRR7131147 Other lineage4.1.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR867573 Other lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR8975044 Other lineage4.1.1.2 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR6045002 RR-TB lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR19304104 Other lineage4.8 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR6982141 Other lineage4.3.3 None
SRR21469200 Other La1.7.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR9119299 HR-TB lineage1.1.1 None
SRR3675582 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR502478 RR-TB lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6046177 Other lineage3.1.2 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR3014599 Pre-XDR-TB lineage4.1.2.1 tn
ERR5311077 Other La1.8.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR867544 Other lineage4.9 None
ERR5979407 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR5818398 Other lineage4.9 None
ERR10796560 Other lineage4.9 None
SRR7069946 Other lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR9117759 Other lineage3 None
SRR1173170 Other lineage4.9 None
SRR6045986 Other lineage3 None
ERR3468488 Other La1.8.1 None
SRR7069518 Other lineage4.8 None
ERR3797062 RR-TB lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR867538 Other lineage4.2.2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR18003023 Other lineage2.2.1 None
SRR1184329 Other lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4819383 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR18003045 Other lineage2.2.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR6785281 Other lineage4.2.1.1 None
ERR867571 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR22249916 Other lineage1.1.1 None
SRR7068912 Pre-XDR-TB lineage2.2.1 None
SRR21469202 Other La1.7.1 None
ERR4819863 RR-TB lineage4.9 None
SRR6046442 Other lineage3 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1792022 Other La1.8.1 None
ERR4819175 Other lineage4.1.1.3 gb
SRR5818414 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
SRR18003002 MDR-TB lineage2.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1181403 Other lineage4.9 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR26399962 HR-TB lineage1.1.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR5818388 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
ERR4821718 Sensitive lineage4.2.2.2 gb
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7131123 Other lineage4.8 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR26399549 HR-TB lineage1.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
ERR3275941 RR-TB lineage4.3 nl
SRR18003047 MDR-TB lineage2.2.1 None
SRR6045909 Other lineage4.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR18002963 Other lineage2.2.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR3675245 Other lineage4.1.2.1 None
SRR18002956 Other lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR502473 RR-TB lineage4.9 None
SRR7131061 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR867570 RR-TB lineage4.9 None