EBG00000313339 - n.2107A>G
Drug resistance types
25 Sensitive
2 RR-TB
10 HR-TB
15 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| La1;lineage4.9 | 1 |
| lineage4.9 | 15 |
| lineage2.2.1 | 10 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.5 | 17 |
| lineage4.8 | 5 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1 | 5 |
| lineage3 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7.1 | 2 |
| lineage4.1.2.1 | 5 |
| La1.7;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| La1.3 | 4 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR11069053 | Sensitive | lineage4.5 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3797086 | Sensitive | lineage4.9 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR28045888 | Sensitive | lineage4.5 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR10610068 | MDR-TB | lineage4.5 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10809194 | Sensitive | lineage4.5 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | DRR185045 | Other | lineage4.5 | vn | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR1633783 | Sensitive | lineage4.5 | za | ERR4769552 | Sensitive | La1.3 | None | ERR1034913 | Sensitive | lineage4.5 | za | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR6359082 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR867569 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR4808923 | Sensitive | lineage4.5 | za | ERR736856 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3290821 | MDR-TB | lineage4.5 | None | SRR21747017 | MDR-TB | lineage2.2.1;lineage4.5 | None | ERR279484 | Sensitive | lineage4.5 | None | SRR20969371 | MDR-TB | lineage4.5 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR752233 | HR-TB | lineage4.5 | th | SRR21469200 | Other | La1.7.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR495015 | Sensitive | lineage4.5 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR234243 | Sensitive | lineage4.5 | vn | ERR4769516 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4769555 | Sensitive | La1.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341373 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4769408 | Other | La1.3 | None | SRR13180204 | Other | lineage3 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR9806693 | MDR-TB | lineage4.5 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10040451 | MDR-TB | lineage4.5 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR21662753 | Other | lineage4.5 | None | SRR6855695 | Sensitive | lineage4.8 | None |
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