EBG00000313325 - n.1319C>T


Drug resistance types
29 Sensitive 34 RR-TB 11 HR-TB 30 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 84 Other
lineage Counts
lineage Count
lineage4.9 33
lineage1.1.3.1 1
lineage2.2.1 29
lineage3.1.1 1
lineage4.4.2 4
lineage4.3.4.1 2
lineage4.8 33
lineage4.4 1
La1.8.1 12
lineage4.6.2.2 1
La1.7.1 3
lineage4.3.3 6
lineage4.1.2.1 9
lineage4.4.1.1 3
lineage2.2 2
lineage4.9.1 1
lineage4.3.2.1 1
4
lineage4.4.1 2
lineage4.3.4.2.1 1
lineage4 7
lineage4.1.1.3 7
lineage4.5 1
lineage1.1.2 3
lineage6.3.1 1
lineage1.1.1 1
lineage4.1.1.3.1 1
lineage4.1.1.3.1;lineage3.1.2 1
lineage1.1.3.2 1
lineage4.9;lineage4.6.2 1
lineage3 7
lineage4;lineage2.2.1 1
lineage4.9;lineage4.2.1 1
lineage4.4.1.2 1
lineage4.3.4.2 2
lineage4.2.1.1 1
lineage4.2.2 1
lineage4.7 2
lineage4.2.1 7
lineage4.2.1;lineage2.2.1 1
lineage6.2.3;lineage1.1.2 1
La1.3 1
lineage4.1.1.2 1
lineage6 1
lineage1.2.1.2 1
lineage4.8;lineage4.3.3 4
spoligotype Counts
spoligotype Count
None 206
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184329 MDR-TB lineage4.9 None
SRR11972206 HR-TB lineage1.1.3.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR12006056 Sensitive lineage4.9 None
SRR12006090 Sensitive lineage4.9 None
SRR12006091 Sensitive lineage4.9 None
SRR12006067 Sensitive lineage4.9 None
SRR12006095 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR12006068 Sensitive lineage4.9 None
SRR12006070 Sensitive lineage4.9 None
SRR12006082 Sensitive lineage4.9 None
SRR12006075 Sensitive lineage4.9 None
SRR13423546 Other lineage4.4.2 None
SRR13423634 Other lineage2.2.1 None
SRR13423637 Other lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR14801720 RR-TB lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15368951 Other lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR16156804 RR-TB lineage4.9 None
SRR1792012 Other La1.8.1 None
SRR1792011 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR18002991 Pre-XDR-TB lineage2.2.1 None
SRR18002900 Pre-XDR-TB lineage2.2.1 None
SRR1792025 Other La1.8.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR21469201 Other La1.7.1 None
SRR2100067 Other lineage4.3.3 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR21469202 Other La1.7.1 None
SRR21469200 Other La1.7.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
ERR2228965 Other lineage4.8 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815257 HR-TB lineage4.4.1.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR1750894 Sensitive lineage4.9.1 zw
ERR1750926 Other lineage4.3.2.1 za
ERR2229810 Other lineage4.8 None
ERR2229541 Other lineage4.8 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR171135 Other lineage2.2.1 za
ERR1750873 Sensitive lineage4.8 bw
ERR1750905 Sensitive lineage4.3.3 za
ERR1750907 RR-TB None
ERR4815488 HR-TB lineage4.4.1 None
ERR1750938 Other lineage4.4.1 None
ERR2229540 Other lineage4.8 None
ERR2229198 MDR-TB lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR2229733 Other lineage4.8 dk
ERR2229147 Other lineage4.8 None
ERR212114 Other lineage4.3.4.2.1 None
ERR2229204 Other lineage4.8 None
ERR2229811 Other lineage4.8 dk
ERR2229801 Other lineage4 None
ERR2229435 HR-TB lineage4.8 None
ERR2229366 Other lineage4.8 None
ERR4817204 RR-TB lineage4.9 None
ERR2229436 Other lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR2228815 RR-TB lineage4.8 None
ERR2228813 Other lineage4.8 None
ERR2228838 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR2228899 RR-TB lineage4.8 None
ERR4817915 RR-TB lineage4.9 None
ERR2228900 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4815816 Other lineage4.5 gb
ERR2228910 Other lineage4.8 None
SAMEA3450033 Other lineage4.8 None
ERR234165 Sensitive lineage1.1.2 tz
ERR2512423 Other lineage4.1.1.3 None
SAMEA3501063 RR-TB lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
ERR2513223 Other lineage4.1.2.1 None
ERR4818440 Other lineage6.3.1 None
SRR5065285 Sensitive lineage1.1.1 vn
ERR2514073 Other lineage4.1.1.3.1 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR2514679 HR-TB lineage2.2.1 gb
ERR4819695 Sensitive lineage4.1.1.3 gb
ERR2514801 Other lineage1.1.3.2 gb
ERR4819815 Sensitive lineage4.9 None
ERR4820829 Other lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
ERR4820580 Sensitive lineage4.9;lineage4.6.2 None
ERR4820185 Sensitive lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4821054 Other lineage3 None
ERR4821276 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045002 MDR-TB lineage4.9 None
ERR4821332 Other lineage4.1.2.1 gb
ERR4822058 Sensitive lineage4.1.2.1 gb
ERR4822157 Sensitive lineage4;lineage2.2.1 gb
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6397815 Other lineage4.4.1.1 None
ERR4829336 Other lineage4 None
ERR4828879 MDR-TB lineage3 None
ERR4828965 MDR-TB lineage4.3.3 it
SRR6152980 HR-TB lineage4.8 ca
SRR6397733 Other lineage4.4.1.2 None
SRR6797613 Other lineage4.3.4.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR6824298 Sensitive lineage4.4.2 cn
SRR6964650 Sensitive lineage3 None
ERR5087500 Other La1.8.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6824678 RR-TB lineage4.2.2 cn
SRR6824680 RR-TB lineage2.2.1 cn
SRR6824683 MDR-TB lineage4.4.2 cn
ERR5087846 Other La1.8.1 None
ERR5087486 Other La1.8.1 None
SRR7585435 Other lineage4.9 None
SRR7131096 Other lineage4.8 None
ERR5087596 Other La1.8.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645929 MDR-TB lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR8600288 Other La1.8.1 None
SRR7645971 Other lineage2.2.1 None
SRR7645973 Other lineage4.3.4.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755652 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
DRR034348 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR017781 Other lineage3 None
ERR019855 Other lineage3 None
ERR10796594 Other lineage4.9 None
ERR028348 Sensitive lineage1.1.2 None
ERR036198 Other lineage4.3.4.2 None
ERR036207 Other lineage4.9 None
ERR038289 Other lineage4.3.3 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796559 Other lineage4.9 None
ERR10796630 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3797063 HR-TB None
ERR4769423 Other La1.3 None
ERR4025018 Other lineage4.1.2.1 None
ERR4188403 Other La1.8.1 None
ERR4187652 Other lineage4.9 None
ERR4769553 RR-TB lineage4.9 None
ERR4812328 Other lineage4.3.3 pe
ERR4800197 HR-TB None
ERR4809346 Pre-XDR-TB lineage4.4.1.1 za
ERR4796351 MDR-TB lineage4.9 None
ERR4800297 Other lineage4.1.1.3 in
ERR5917985 MDR-TB lineage2.2.1 None
ERR5864651 MDR-TB lineage2.2.1 None
ERR5979407 Other lineage3 None
ERR7902623 Sensitive lineage1.1.2 None
ERR6865587 Other lineage4.1.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR8975044 Other lineage4.1.1.2 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR9787033 Sensitive lineage6 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR10214505 Sensitive lineage1.2.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR023450 RR-TB lineage2.2.1 None
SRR023487 RR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR1175472 MDR-TB lineage4 None
SRR1173185 HR-TB lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1173421 RR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None