Rv0668 - c.1164C>T
Drug resistance types
31 Sensitive
12 RR-TB
5 HR-TB
19 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti | 10 |
| lineage3 | 6 |
| lineage4.9 | 19 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti | 9 |
| lineage4.8 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.6.4;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| La1.3 | 1 |
| La1.8.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La2;M.canetti | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage3;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18289195 | Sensitive | M.canetti | None | SRR6046376 | Other | lineage3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR551182 | Sensitive | M.canetti | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR1043164 | Other | La3;M.canetti | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | ERR551179 | Sensitive | M.canetti | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3597004 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR6046839 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR11465234 | Sensitive | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4769436 | Other | La1.3 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR21469202 | Other | La1.7.1 | None | SRR1062918 | Other | lineage3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR266126 | Sensitive | La2;M.canetti | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR1049672 | Other | lineage3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR16157123 | Other | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR266120 | Sensitive | M.canetti | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR551180 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR266125 | Other | La3;M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | SRR10993951 | RR-TB | La1.6 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4821276 | Sensitive | lineage3 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR6359066 | HR-TB | lineage4.9 | None |
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