Rv0668 - c.1164C>T
Drug resistance types
9 Sensitive
17 RR-TB
15 HR-TB
16 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 23 |
| 21 | |
| La1.8.1 | 1 |
| lineage2.2.1 | 15 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4 | 8 |
| La1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage3 | 7 |
| La1.6 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | ERR5087846 | Other | La1.8.1 | None | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR11465234 | Sensitive | lineage4.3.4.2.1;lineage4.1.2.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR067681 | HR-TB | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR4769436 | Other | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR736839 | Other | None | SRR10315567 | Other | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14164490 | HR-TB | lineage4.4.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | SRR24061597 | Sensitive | None | ERR4816964 | Other | lineage4.9 | None | ERR1750907 | RR-TB | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR1035162 | Other | None | SRR3675550 | Other | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR1023509 | Other | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821276 | Other | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046376 | Other | lineage3 | None |
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