Rv0668 - c.1206T>C
Drug resistance types
14 Sensitive
20 RR-TB
12 HR-TB
8 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| lineage2.2.1 | 13 |
| lineage6.1.3 | 1 |
| lineage4.9 | 16 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.8 | 9 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.2.1 | 2 |
| La1.7.1 | 2 |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.3.2;lineage4 | 1 |
| lineage1.2.1.2.1 | 1 |
| 2 | |
| lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.8.1 | 2 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4815079 | RR-TB | lineage3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR19303775 | Sensitive | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR12015084 | Other | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1238559 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR181750 | Sensitive | lineage1.1.3.2;lineage4 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR6358991 | HR-TB | None | ERR161037 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR9786525 | Other | lineage4 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR4820394 | Sensitive | lineage4.3.4.2.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR212123 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4797141 | Sensitive | lineage3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4188213 | Other | La1.8.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR990545 | Other | lineage3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None |
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