EBG00000313339 - n.1094G>A
Drug resistance types
9 Sensitive
29 RR-TB
8 HR-TB
30 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 11 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.9 | 26 |
| lineage4.8.1 | 1 |
| lineage4.1.2.1 | 9 |
| La1.3 | 2 |
| lineage2.2.1 | 39 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage2.2.2 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.2 | 5 |
| lineage4.2.1 | 7 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.2.2.2 | 2 |
| La1.2 | 2 |
| lineage3 | 8 |
| lineage3.1.1 | 4 |
| lineage4.4 | 1 |
| La2 | 1 |
| lineage1.2.2.2 | 3 |
| La1.8.1 | 7 |
| lineage4.4.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| La1.4 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.3 | 4 |
| La1.7.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| 1 | |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 1 |
| La1.6 | 1 |
| lineage4.3.2 | 1 |
| lineage4 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 192 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303907 | Other | lineage4.8 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR3077969 | Other | La1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR7851312 | Other | La1.2 | None | ERR867555 | Other | lineage3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR3283032 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR5311077 | Other | La1.8.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR16278274 | Other | La1.4 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1792011 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR19303899 | Other | lineage3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4769418 | Other | La1.2 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1792025 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR867569 | Other | lineage4.9 | None | SRR7069946 | Other | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR7069074 | Other | lineage3 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR21469202 | Other | La1.7.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR4817069 | RR-TB | None | SRR7645971 | Other | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None |
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