EBG00000313339 - n.1094G>A


Drug resistance types
23 Sensitive 53 RR-TB 22 HR-TB 52 MDR-TB 29 Pre-XDR-TB 1 XDR-TB 141 Other
lineage Counts
lineage Count
lineage4.8 21
lineage4.3.2 3
lineage4.9 54
lineage3 16
lineage4.1.2.1 25
lineage4.1.1.3 8
lineage3.1.2.1 3
9
lineage4 11
lineage6.1.3 1
lineage1.1.3.1 1
lineage4.7 5
lineage4.8.2 3
lineage3.1.3 1
lineage3.1.2.2 3
lineage4.3.4.2.1 3
lineage4.2.2.2;lineage3 1
lineage4.2.2.2 3
lineage4.1.1.3.1 1
lineage3.1.1 5
lineage4.1.2 1
lineage4.1.1 1
lineage2.2.1 57
lineage1.2.2.2 2
La1.3 5
lineage4.3.3 5
lineage4.2.1.1 1
lineage4.1.2;lineage3.1 2
lineage4.3.4.1 3
lineage5.1.1 1
La1.8.1 9
lineage4.3 2
lineage4.3.4.2 2
lineage2.2.1.1 3
lineage4.2.1 7
La1.2 2
lineage2.2.2 5
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
lineage4.5;lineage2.2.1 1
lineage4.4.2 5
lineage4.1.1.2 1
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.2.1 1
La1.6 1
La2 1
La1.4 1
lineage4.4 1
lineage4.4.1.1 1
lineage4.2.2 1
lineage4.5 1
lineage1.2.1.2 2
La1.7.1 3
lineage1.1.1 1
lineage6.1.1 1
lineage2.2 2
lineage4.9;lineage3.1.1 1
lineage4.1 1
lineage3.1 1
lineage1.1.2 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 321
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820484 Other lineage4.8 None
ERR4818272 Other lineage4.3.2 None
ERR4819383 RR-TB lineage4.9 None
ERR4818831 Other lineage3 None
SRR5007172 Sensitive lineage4.1.2.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4819863 RR-TB lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4820193 Other lineage3 None
ERR4820030 Other lineage4.9 None
ERR1023509 Other None
ERR4821811 RR-TB lineage4.9 None
ERR4821769 Other lineage4.1.2.1 None
SRR6045553 RR-TB lineage4.9 None
ERR4821057 HR-TB lineage4 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045496 Other lineage6.1.3 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821519 Other lineage3 gb
ERR4821725 Other lineage4.8.2 gb
SRR6045621 Other lineage4.1.1.3 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR6045642 Other lineage3.1.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6046210 Other lineage4 None
SRR6044838 Other lineage4.9 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045986 Other lineage3 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045928 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044952 RR-TB lineage4.9 None
SRR6046159 Other lineage4.8.2 None
SRR6045999 Sensitive lineage4.8.2 gb
SRR6046020 Other lineage3 None
SRR6045138 Other lineage3.1.1 None
SRR6045384 Other lineage4.1.2 None
SRR6045295 Other lineage4.7 None
SRR6045178 Other lineage3 None
SRR6045243 Sensitive lineage4.1.1 gb
SRR6046250 Other lineage4.9 None
SRR6046275 Other lineage3.1.1 None
SRR6046343 Other lineage2.2.1 None
SRR6046359 Other lineage4.7 None
ERR4829472 Sensitive lineage4.8 it
ERR2851354 RR-TB lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046482 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR3077969 Other La1.3 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR6896545 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6982141 RR-TB lineage4.3.3 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4972588 MDR-TB lineage4.3.2 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5087846 Other La1.8.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR5087596 Other La1.8.1 None
SRR7131145 Other lineage4.1.2.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131028 Other lineage4.8 None
SRR7131031 Other lineage4.2.2.2 None
SRR7131075 Other lineage4.8 None
SRR7131097 Sensitive lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131161 Other lineage4.8 None
SRR7131195 Other lineage2.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645927 Other lineage4.8 None
SRR7585435 Other lineage4.9 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7851312 Other La1.2 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
DRR184982 RR-TB lineage2.2.1 None
DRR184903 Sensitive lineage2.2.2 None
DRR185024 Other lineage2.2.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR3283006 RR-TB lineage4.9 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10796568 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR3283033 Sensitive lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283032 HR-TB None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3468488 RR-TB La1.8.1 None
ERR4187652 Other lineage4.9 None
ERR3468561 HR-TB lineage4.9 None
ERR3468613 RR-TB La1.8.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4769514 Other La1.3 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769453 Other La1.3 None
ERR4769517 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR4769539 Sensitive lineage4.9 None
ERR4769553 RR-TB lineage4.9 None
ERR4769546 Other La1.3 None
ERR4800297 Other lineage4.1.1.3 in
ERR4800226 Pre-XDR-TB lineage2.2.1 in
ERR4800197 HR-TB None
ERR5979407 Other lineage3 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4811101 Other lineage4.4.2 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR6197044 RR-TB lineage4.9 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR6197024 RR-TB lineage4.9 None
ERR6197032 Other lineage4.9 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR6359073 Sensitive lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR8158065 Sensitive lineage2.2.1 None
ERR9117760 HR-TB lineage4.3 None
ERR9117747 HR-TB lineage4.8 None
ERR9117805 Other lineage4.3.2 None
ERR987707 MDR-TB lineage4.7 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR10315558 Sensitive lineage2.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR1175473 Other lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1173310 MDR-TB None
SRR1173770 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1173170 Other lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1196478 MDR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1184329 MDR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1184308 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR13888750 Other La2 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15508556 Other lineage4.3.4.1 None
SRR16058205 HR-TB lineage2.2.1 None
SRR16156751 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR16156832 RR-TB None
SRR16627752 RR-TB lineage4.4 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1792011 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002980 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002995 Other lineage4.4.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR19303810 Sensitive lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303899 Other lineage3 None
SRR20969475 Other lineage1.2.1.2 None
SRR19303917 Other lineage2.2.1 None
SRR19303907 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR21469201 Other La1.7.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21469202 Other La1.7.1 None
SRR21469200 Other La1.7.1 None
SRR21658550 Other lineage1.1.1 None
SRR21595944 Other lineage2.2.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21658552 Other lineage6.1.1 None
SRR21659828 Sensitive lineage4.1.2.1 None
SRR21662764 Other lineage2.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR21727888 Other lineage1.2.1.2 None
SRR22048375 Other lineage4.1.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675282 Other None
ERR4815502 Other lineage4.1 None
SRR3675265 Other lineage4 None
ERR4814905 Other lineage4.8 gb
ERR4813263 MDR-TB lineage4.8 None
ERR4815079 RR-TB lineage3 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815075 MDR-TB lineage3 None
SRR3675513 Other lineage4.8 None
ERR4816184 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816231 Other lineage4 None
ERR4817069 RR-TB None
SRR3675565 Other lineage3 None
ERR212114 Other lineage4.3.4.2.1 None
ERR4816417 Other lineage4.9 None
ERR4816571 Other lineage1.1.2 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229442 HR-TB lineage4.8 None
ERR4816734 Sensitive lineage4.9 None
ERR2229791 RR-TB lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817915 RR-TB lineage4.9 None
ERR2510736 Other lineage4.1.2.1 None
ERR2510781 Sensitive lineage4.8 it