Rv0668 - c.1161C>T
Drug resistance types
118 Sensitive
11 RR-TB
16 HR-TB
18 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 124 |
| lineage1.1.3 | 4 |
| lineage4 | 4 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.1.2 | 3 |
| La1.7;lineage4.9 | 3 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1 | 14 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.8 | 3 |
| lineage4.3.4.1 | 3 |
| La1;lineage4.9 | 3 |
| lineage3 | 2 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7.X-unk4 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage1.1.1;lineage4 | 1 |
| La1.2.BCG | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1.1 | 4 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage4.9 | 8 |
| lineage4.1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 3 |
| La1.3 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1 | 1 |
| La3;lineage4 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| 1 | |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369158 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4821264 | Other | lineage1.1.3 | None | SRR6046839 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4814843 | Other | lineage1.1.3 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR736848 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675441 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR29050859 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR4817060 | Other | None | ERR4820815 | Sensitive | lineage1.1.3 | gb | ERR369159 | Sensitive | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
|---|
