Rv0668 - c.1161C>T
Drug resistance types
117 Sensitive
32 RR-TB
31 HR-TB
19 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 66 |
| 27 | |
| lineage4.9 | 66 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 2 |
| lineage4.1.2.1 | 10 |
| lineage5.1.2 | 1 |
| lineage2.2.1 | 17 |
| La1.2 | 1 |
| La1.3 | 4 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.2 | 4 |
| lineage3.1.2.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.7 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8 | 8 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 2 |
| lineage2 | 1 |
| lineage4.2.1 | 2 |
| lineage3 | 11 |
| lineage2.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| La1.7.1 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.1.3 | 4 |
| lineage1.2.1.1 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1 | 3 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3.4.2.1;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 279 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR108471 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4798431 | HR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6336757 | Sensitive | lineage1.2.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808399 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR8692807 | Other | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815310 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4814843 | Other | lineage1.1.3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815528 | Other | lineage4.8 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815909 | Other | lineage4.8 | None | SRR3675387 | Sensitive | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4817060 | RR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817131 | Pre-XDR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR4034439 | Sensitive | lineage4.3.2 | za | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR4033286 | Sensitive | lineage4.8.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818763 | Other | lineage3 | gb | ERR4818691 | Other | lineage4.8 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819131 | Other | lineage4 | None | ERR4819424 | Other | lineage4.8 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819456 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820815 | Other | lineage1.1.3 | gb | ERR2514552 | Sensitive | lineage3 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4820833 | HR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR6046210 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821214 | RR-TB | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821712 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044936 | Other | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR6896171 | RR-TB | lineage4.3.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982388 | Sensitive | lineage4.1.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6896542 | Sensitive | lineage4.3.4.2.1;lineage4.3.2.1 | None | ERR502943 | HR-TB | None | ERR323107 | Other | lineage4 | None | SRR9971150 | RR-TB | lineage4.8.1 | None |
|---|
