EBG00000313339 - n.2388G>C
Drug resistance types
2 Sensitive
6 RR-TB
19 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.9 | 5 |
| lineage2.2 | 2 |
| lineage4.8 | 1 |
| 13 | |
| lineage4.3.3 | 2 |
| lineage5.1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 3 |
| La1.8.1 | 4 |
| lineage4.4.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4 | 1 |
| lineage3 | 2 |
| lineage3.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR176740 | HR-TB | None | ERR212123 | Other | None | SRR5341470 | HR-TB | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR3675555 | HR-TB | None | ERR2513405 | Other | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR11466445 | Sensitive | lineage4.3.4.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR387051 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR6197031 | Other | lineage4.7 | None | ERR037504 | Other | lineage4.9.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172310 | HR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1180446 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None |
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