EBG00000313339 - n.982G>C
Drug resistance types
87 Sensitive
57 RR-TB
100 HR-TB
98 MDR-TB
49 Pre-XDR-TB
1 XDR-TB
261 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 99 |
| 52 | |
| lineage4.9 | 134 |
| lineage3 | 39 |
| lineage4.1.2.1 | 28 |
| lineage4.7 | 6 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1 | 2 |
| lineage3.1.3 | 3 |
| lineage4.1.1.3 | 8 |
| lineage4 | 43 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.3.4.2.1 | 9 |
| lineage4.2.2.2 | 2 |
| lineage1.1.2 | 4 |
| lineage4.4 | 2 |
| lineage4.8 | 32 |
| lineage4.1.1.3.1 | 2 |
| lineage3.1.1 | 5 |
| lineage3.1.2.2 | 3 |
| lineage1.1.3.3 | 2 |
| lineage4.1.2 | 3 |
| lineage6.3.1 | 2 |
| lineage4.4.1.1 | 9 |
| lineage4.3.3 | 18 |
| lineage1.2.2.2 | 5 |
| lineage4.6.5 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.1 | 2 |
| La1.8.1 | 14 |
| lineage4.3.4.1 | 4 |
| lineage5.1.1 | 1 |
| La1.6 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.3.4.2 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.2.1 | 6 |
| lineage4.8.1 | 2 |
| lineage2.2.2 | 7 |
| lineage1.1.1.1 | 2 |
| lineage4.4.2 | 6 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 6 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage2.2 | 8 |
| lineage4.3.4 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.5 | 4 |
| lineage4.3.2 | 1 |
| lineage6 | 3 |
| lineage1.2.1.2 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.6.2.2 | 3 |
| La1.7.1 | 4 |
| lineage3.1.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.6 | 1 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 1 |
| lineage6.2.1 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 653 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821550 | Other | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | SRR6046210 | Other | lineage4 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045022 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046020 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045295 | Other | lineage4.7 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045384 | Other | lineage4.1.2 | None | ERR4829231 | Sensitive | lineage6.3.1 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | ERR2851359 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4829247 | MDR-TB | lineage4.3.3 | None | SRR6046442 | Other | lineage3 | None | ERR4829615 | Sensitive | lineage4.3.3 | None | ERR4829692 | Sensitive | lineage4.1.2.1 | None | ERR4829767 | HR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046492 | Other | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6896545 | Other | lineage4.9 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR5087486 | Other | La1.8.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502538 | Other | La1.6 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131131 | Sensitive | lineage6.3.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | lineage4 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR323045 | HR-TB | None | DRR184629 | Other | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR038289 | Other | lineage4.3.3 | None | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796588 | Other | lineage4 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR10796634 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR4187652 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4188247 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769423 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769480 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5908124 | Other | lineage4.8 | None | ERR4811493 | HR-TB | None | ERR4811708 | HR-TB | lineage4 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR5979407 | Other | lineage3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117759 | Other | lineage3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119098 | Sensitive | lineage4.3.3 | None | ERR9119120 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9787336 | Other | lineage6 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315709 | MDR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172075 | Pre-XDR-TB | lineage3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183034 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972215 | RR-TB | lineage4.5 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR14782405 | HR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14801832 | Sensitive | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16058205 | HR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16058218 | MDR-TB | lineage4.3.4.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR1792011 | Other | La1.8.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002877 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003036 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18911232 | Sensitive | lineage1.2.2.2 | None | SRR18913779 | Other | lineage3 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304104 | Other | lineage4.8 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21726726 | Sensitive | lineage4.1.2.1 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22424727 | MDR-TB | lineage3.1.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR176779 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR176778 | HR-TB | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815310 | Other | None | ERR1815538 | Other | La1.7.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814705 | Sensitive | lineage4 | None | SRR3675227 | Other | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR171135 | Other | lineage2.2.1 | za | ERR1750916 | Other | lineage2.2.1.1 | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR4814776 | Sensitive | lineage3 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176651 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675456 | HR-TB | None | ERR181887 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR3675513 | Other | lineage4.8 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | SRR3675555 | HR-TB | None | ERR4816699 | Other | lineage4.6 | None | ERR212125 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816464 | Other | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4817434 | Other | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817301 | Other | lineage4.9 | None | ERR4816934 | Sensitive | lineage3 | None | SRR4033523 | Other | lineage2.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR228180 | Sensitive | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4818536 | Other | lineage4.9 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818313 | Other | lineage2.2.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR2509891 | Other | lineage3 | None | ERR4818879 | Sensitive | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818561 | HR-TB | lineage4 | None | ERR4819093 | Other | lineage4.3.3 | None | SRR5007199 | Other | lineage4.1.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | ERR4820484 | Other | lineage4.8 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4819910 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR2446509 | Other | lineage3 | nl | SRR5431730 | Other | La1.8.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045496 | Other | lineage6.1.3 | None |
|---|
