EBG00000313339 - n.2887T>A
Drug resistance types
0 Sensitive
6 RR-TB
0 HR-TB
10 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 6 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage2.2.1 | 10 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 3 |
| La1.8.1 | 3 |
| La1.7.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.2 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175473 | Other | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None |
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