Rv0668 - c.1212T>C


Drug resistance types
33 Sensitive 99 RR-TB 53 HR-TB 155 MDR-TB 27 Pre-XDR-TB 4 XDR-TB 215 Other
lineage Counts
lineage Count
lineage4.1.4 1
lineage4.3.4.2.1 12
M.canetti;lineage2.1;lineage4.9 24
lineage2.2.1 53
lineage2.1;lineage4.9 14
La1.7.1 2
lineage4.9 96
La1.7;M.canetti;lineage4.9 2
lineage4.9;lineage6.3 3
lineage3 25
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
18
lineage4.1.2.1;lineage4.4.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La1.8.1 10
lineage4.5 2
lineage4.6.1.1 9
lineage1.1.2;lineage4 1
lineage3.1.2.1 4
lineage4.8.1 4
La1.6 1
lineage2.1;lineage6.3 2
lineage4.4.1.1 7
lineage4.1.1.3.1 3
lineage1.1.2 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 5
lineage4.1.2.1 26
lineage2.1;lineage4.9;lineage6.3 6
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.3 11
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage3;lineage4.9 1
La3;M.canetti;lineage4.9 2
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.5 2
lineage4.2.2.2 3
lineage2.1 2
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9 3
lineage4 4
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.6.1.2 8
lineage4.2.1 8
lineage4.1.2 5
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.8 21
lineage4.1.1.1 5
M.canetti 1
La1.6;La3;lineage4.9 2
lineage1.1.3.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.7 3
lineage2.2.1;lineage4.5 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 7
lineage4.1.2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.6.2.2 4
lineage1.2.1.2 1
La1.3 3
lineage4.1.1.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
La1.7 2
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage4.4.1.1.1 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1;lineage9 1
La1.2.BCG 1
La3;lineage4.8 2
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage3.1.2 1
lineage1.1;lineage4 1
lineage4.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.2;lineage4.9 1
lineage4.3.4.1 4
M.canetti;lineage2.2 1
lineage2.2.1;lineage4.9 2
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 2
lineage4.4.2 1
lineage4.1.3 3
lineage1.2.1.2.1 1
lineage4.6.3;lineage4.9 1
lineage4.3.2.1 4
lineage1.2.2.2 2
lineage4.3.1 1
M.canetti;lineage2.1;lineage6.3 2
lineage4.1.2.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
La1;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage1.2.1.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;lineage4.9 1
lineage3;lineage4 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage2.2.1.1 1
lineage2.2;lineage4 1
La2;M.canetti 1
lineage4.8.2 1
lineage4.4 1
lineage4.9;lineage6.1.3 1
lineage4.3.4.2 1
La2 1
lineage5.1.1 2
lineage1.1.3.2 1
lineage2.2.1.2;lineage7 1
lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage3.1.1 4
La1.7.X-unk4 1
lineage4.1 1
M.canetti;lineage2.1 1
La3;lineage2.2.1 1
lineage6.1.3 1
lineage2;lineage4 1
lineage4.3.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
La1.2 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
lineage4.4.1.2 1
lineage4.9;lineage7 1
lineage1.1.1.1 1
La1.4 1
spoligotype Counts
spoligotype Count
None 586
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4828962 Sensitive lineage4.1.4 it
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR3283021 MDR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1062918 Other lineage3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4820586 Other lineage3 gb
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675572 Other None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR3675236 Other None
ERR4816999 Other None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1792022 Other La1.8.1 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR10315558 RR-TB lineage2.2.1 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
ERR4819011 Other lineage3.1.2.1 None
SRR3675275 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4821143 Other lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18002941 RR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1181256 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6046839 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR038289 Other lineage4.3.3 None
SRR16156804 Sensitive lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820833 Other lineage3;lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
DRR184629 Other lineage2.2.1 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702406 Other lineage2.1 None
ERR4816322 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR19303775 Sensitive lineage3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR266120 Other M.canetti None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4819528 RR-TB lineage3 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR4821811 Sensitive lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1183067 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR19303788 Sensitive lineage4.8 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR20969475 Other lineage1.2.1.2 None
ERR3275190 Other lineage3 nl
ERR4769495 Other La1.3 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4769436 Other La1.3 None
ERR5979407 Other lineage3 None
ERR323037 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
ERR502474 RR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR4797141 Sensitive lineage3 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR4830353 HR-TB La1.7 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR21469202 Other La1.7.1 None
ERR4819241 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR7496509 Other None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303773 Other lineage4.6.2.2 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
ERR4769530 RR-TB lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR4821176 Other lineage2.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6785413 Other lineage2.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR11342695 MDR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR2693228 RR-TB lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR1238559 Other lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR1735596 RR-TB lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
SRR3675269 RR-TB lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR7645973 Other lineage4.3.4.1 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR2446509 Other lineage3 nl
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR4816729 Sensitive lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4820394 Sensitive lineage4.3.4.2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR7069800 Other lineage3.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1049743 Sensitive lineage4.6.1.1 None
ERR4811708 HR-TB lineage4 None
ERR2229198 Sensitive lineage4.8 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR15315797 RR-TB lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR16156188 Sensitive lineage4.9 None
ERR2515352 Sensitive lineage2.2.1 None
ERR400443 Sensitive lineage1.2.1.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR502473 RR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1792025 Other La1.8.1 None
ERR485006 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR1049744 Sensitive lineage4.6.1.1 None
SRR1140716 Other lineage3 None
SRR6046376 Other lineage3 None
ERR11466014 Sensitive lineage4.3.4.2.1 None
ERR11049143 Sensitive lineage4.1.2.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5818672 Other lineage1.2.2.2 None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4813263 MDR-TB lineage4.8 None
SRR18572454 RR-TB lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR4814352 Other lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR3283006 RR-TB lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR1792011 Other La1.8.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4819863 RR-TB lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR9786682 Other lineage4.1.2.1 None
SAMN02381047 Sensitive lineage4.6.1.1 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR4817069 RR-TB None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
ERR4817060 Other None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR2514327 HR-TB lineage4.8 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR4816310 HR-TB lineage4.6.1.2 None
SRR1180440 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311084 Other La1.8.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4815556 RR-TB lineage3 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR9786569 Other lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3275220 Other lineage3 nl
ERR4769423 Other La1.3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR266126 Other La2;M.canetti None
ERR323035 Sensitive lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR990545 RR-TB lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
ERR867573 Other lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR13861381 HR-TB lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR6045002 RR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR867554 Other lineage4.3.4.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR2517528 RR-TB lineage3 nl
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR5087846 Other La1.8.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13888750 Other La2 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
ERR751330 MDR-TB lineage5.1.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4816755 Other lineage4.1.1.3 None
ERR502478 RR-TB lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR751345 Other lineage5.1.1 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4818583 Other lineage4.3.3 None
ERR4796351 Sensitive lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR5917710 RR-TB lineage4.1.2.1 None
SRR7645899 Other lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR1173740 Other lineage3;lineage4 None
SRR2100067 Other lineage4.3.3 None
SRR26399255 Sensitive lineage2.2.1 None
ERR5311077 Other La1.8.1 None
ERR4817189 Other lineage4.7 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR9117805 Other lineage4.3.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4815079 RR-TB lineage3 None
SRR3675221 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR2446144 Other lineage3 nl
SRR10315556 Sensitive lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR15508556 Other lineage4.3.4.1 None
ERR11049020 Other lineage4.8 None
ERR3797062 RR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4820410 RR-TB lineage3.1.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR4821276 Sensitive lineage3 None
ERR9786440 Other lineage4.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR12015083 Other La3;lineage4.8 None
SRR9971046 MDR-TB lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1049723 MDR-TB lineage4.6.1.1 None
ERR4818347 Other lineage4.1.2 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR11349133 MDR-TB lineage4.3.3 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR5311087 Other La1.8.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1238558 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
SRR3675457 Other lineage4.9 None
ERR4814748 Other lineage4.8 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR3675494 RR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1049736 Sensitive lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502470 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR9971122 MDR-TB lineage4.8 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1183152 Other lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1173170 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR1140586 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
SRR1172234 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4821408 Sensitive lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675222 Other La1.7 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2509886 Other lineage3 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None