TB-Profiler
Home
Upload
SRA data
Rv0668
- c.1212T>C
Drug resistance types
37 Sensitive
85 RR-TB
90 HR-TB
108 MDR-TB
28 Pre-XDR-TB
4 XDR-TB
258 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
105
lineage2.2.1
55
lineage4.1.2.1
27
lineage3
26
M.canetti;lineage2.1;lineage4.9
24
lineage4.8
22
18
lineage2.1;lineage4.9
14
La3;M.canetti;lineage2.1;lineage4.9
12
lineage4.3.4.2.1
12
Showing 1 to 10 of 148 entries
Previous
1
2
3
4
5
…
15
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
610
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR184629
Other
lineage2.2.1
None
DRR185024
Other
lineage2.2.2
None
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR038289
Other
lineage4.3.3
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023502
MDR-TB
lineage2;lineage4
None
ERR1023509
Other
lineage4.9
None
ERR1034647
MDR-TB
lineage4.1.1.3
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR10762275
MDR-TB
lineage4.2.1
None
Showing 1 to 10 of 610 entries
Previous
1
2
3
4
5
…
61
Next