EBG00000313339 - n.2448delG
Drug resistance types
2 Sensitive
6 RR-TB
1 HR-TB
2 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 3 |
| lineage2.2.1 | 6 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| La1.7.1 | 3 |
| lineage4.9 | 2 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469200 | Other | La1.7.1 | None |
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