EBG00000313325 - n.778A>C


Drug resistance types
20 Sensitive 27 RR-TB 10 HR-TB 17 MDR-TB 11 Pre-XDR-TB 1 XDR-TB 60 Other
lineage Counts
lineage Count
lineage3.1.1 2
lineage4.1.2 2
lineage4.4.1.2 2
lineage4.9 18
lineage4.9;lineage4.6.2 1
lineage4.8 31
lineage4.4.1.1 5
lineage3 5
lineage4.9;lineage4.2.1 1
lineage4.5 1
lineage4.3.3 6
lineage2.2.1 16
lineage4.3.4.2 1
La1.8.1 9
lineage6.2.3;lineage1.1.2 1
lineage4.6.2.2 2
lineage5 1
lineage4.3.4 1
La1.3 1
lineage4.5;lineage2.2.1 1
lineage1.1.3.2 1
lineage4.6.5 2
lineage4.1.1.2 1
lineage4.3.4.2.1 1
lineage4.1.1.3 4
lineage4.7 1
lineage2.2 4
lineage4.8;lineage4.3.3 4
lineage4.9;lineage2.2.1 1
lineage4 8
lineage4.3.4.1 1
lineage2.2.1.1 1
lineage4.1.2.1 2
La1.7.1 3
lineage1.1.2 1
2
lineage4.2.1 1
lineage4.1.1.3.1;lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 146
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6397443 Sensitive lineage3.1.1 ca
ERR270777 HR-TB lineage4.1.2 None
SRR6397579 Other lineage4.4.1.2 ca
ERR4819910 Other lineage4.9 None
ERR4820580 Sensitive lineage4.9;lineage4.6.2 None
SAMEA3501046 RR-TB lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
SRR6152980 HR-TB lineage4.8 ca
SAMEA3501052 RR-TB lineage4.8 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR4821276 Other lineage3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4828879 MDR-TB lineage3 None
SRR5818396 Other lineage4.9 None
SRR5818457 Other lineage4.9 None
SRR6046907 Other lineage4.9 None
ERR4815816 Other lineage4.5 gb
ERR4812328 Other lineage4.3.3 pe
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6397733 Other lineage4.4.1.2 None
SRR6397815 Other lineage4.4.1.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6797613 Other lineage4.3.4.2 None
ERR5087846 Other La1.8.1 None
ERR5087486 Other La1.8.1 None
DRR034348 Other lineage2.2.1 None
ERR5087596 Other La1.8.1 None
SRR8600288 Other La1.8.1 None
ERR017781 Other lineage3 None
DRR184982 RR-TB lineage2.2.1 None
ERR019855 Other lineage3 None
ERR038289 Other lineage4.3.3 None
ERR036207 Other lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR4821318 HR-TB lineage4.6.2.2 gb
ERR4769553 RR-TB lineage4.9 None
ERR4192364 Sensitive lineage5 None
ERR4407473 HR-TB lineage4.3.4 None
ERR4407536 Sensitive lineage4.4.1.1 None
ERR4772215 Other La1.3 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR2514801 Other lineage1.1.3.2 gb
ERR5864556 Pre-XDR-TB lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5864927 MDR-TB lineage2.2.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR8975044 Other lineage4.1.1.2 None
ERR212114 Other lineage4.3.4.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR023450 RR-TB lineage2.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1013527 RR-TB lineage2.2 None
SRR023487 RR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1173421 RR-TB lineage4.9 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR1173185 HR-TB lineage4.9 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1173833 Other lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR11972173 Sensitive lineage4.4.1.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1792012 Other La1.8.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1792011 Other La1.8.1 None
SRR11972182 MDR-TB lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR11972432 MDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR14801720 RR-TB lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
SRR15600379 MDR-TB lineage2.2.1.1 None
SRR1792024 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR1792025 Other La1.8.1 None
SRR18572455 Sensitive lineage4.9 None
SRR2100067 Other lineage4.3.3 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21469200 Other La1.7.1 None
SRR21469202 Other La1.7.1 None
SRR21469201 Other La1.7.1 None
SRR21722120 Sensitive lineage4.1.2.1 None
ERR4815271 HR-TB lineage1.1.2 None
SAMEA3501065 RR-TB lineage4.8 None
SRR3082068 Sensitive lineage4.8 None
SRR3085327 Sensitive lineage4.8 None
ERR2229148 Other lineage4.8 dk
ERR2229733 Other lineage4.8 dk
ERR2229811 Other lineage4.8 dk
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR2229540 Other lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR1750907 RR-TB None
ERR2229541 Other lineage4.8 None
ERR2229557 HR-TB lineage4.8 None
ERR2228965 Other lineage4.8 None
ERR4815957 HR-TB lineage4.2.1 None
ERR2229024 Sensitive lineage4 None
SAMEA3501015 Other lineage4.8 None
ERR2229147 Other lineage4.8 None
ERR4817214 Other lineage4.8 None
SRR3675587 Sensitive lineage3 None
ERR2229204 Other lineage4.8 None
ERR2229233 Sensitive lineage4 None
ERR2229366 Other lineage4.8 None
ERR2229436 Other lineage4.8 None
SRR5818426 Other None
ERR2229801 Other lineage4 None
ERR2228815 RR-TB lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR2228813 Other lineage4.8 None
ERR2228890 Other lineage4 None
ERR2229804 Other lineage4 None
ERR2228838 RR-TB lineage4.8 None
ERR2229523 Sensitive lineage4.8 None
SRR4033523 Other lineage2.2 None
ERR2228900 RR-TB lineage4.8 None
ERR2228910 Other lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR4817776 Sensitive lineage4.9 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2512423 Other lineage4.1.1.3 None
SAMEA3450033 Other lineage4.8 None
ERR4818224 Sensitive lineage4.4.1.1 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818234 Sensitive lineage4.9 None
ERR4819568 Sensitive lineage4.9 None
SRR5074711 Sensitive lineage4.3.3 None
ERR4818583 Other lineage4.3.3 None
SAMEA3501067 RR-TB lineage4.8 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR2100877 HR-TB lineage4.1.2 None