EBG00000313325 - n.778A>C
Drug resistance types
34 Sensitive
27 RR-TB
10 HR-TB
18 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage4.1.1.3 | 6 |
| lineage4.8 | 35 |
| lineage4.4.1.1 | 6 |
| lineage4.3.3 | 6 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage3 | 6 |
| lineage4.1.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.2 | 1 |
| La1.8.1 | 9 |
| lineage2.2.1 | 18 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage5 | 1 |
| La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage2.2 | 4 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4 | 8 |
| lineage2.2.1.1 | 1 |
| La1.7.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage1.1.2 | 1 |
| 2 | |
| lineage4.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817776 | Sensitive | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818224 | Sensitive | lineage4.4.1.1 | None | ERR4817977 | Other | lineage4.8 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818234 | Sensitive | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819209 | Sensitive | lineage4.3.4.2.1 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4819568 | Sensitive | lineage4.9 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819910 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821276 | Other | lineage3 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821592 | Pre-XDR-TB | lineage3.1.2 | gb | ERR4822157 | Sensitive | lineage4;lineage2.2.1 | gb | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR4828879 | MDR-TB | lineage3 | None | SRR6046907 | Other | lineage4.9 | None | SRR6045311 | Sensitive | lineage4.3.4.1 | gb | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6397443 | Sensitive | lineage3.1.1 | ca | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR8600288 | Other | La1.8.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797613 | Other | lineage4.3.4.2 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR019855 | Other | lineage3 | None | DRR034348 | Other | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR4407473 | HR-TB | lineage4.3.4 | None | ERR038289 | Other | lineage4.3.3 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4192364 | Sensitive | lineage5 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4407536 | Sensitive | lineage4.4.1.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR4772215 | Other | La1.3 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972182 | MDR-TB | lineage2.2.1 | None | SRR11972173 | Sensitive | lineage4.4.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972432 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR15600379 | MDR-TB | lineage2.2.1.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21469202 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR3082068 | Sensitive | lineage4.8 | None | ERR4815271 | HR-TB | lineage1.1.2 | None | SRR3675489 | Sensitive | lineage3 | gb | SRR3085327 | Sensitive | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750873 | Sensitive | lineage4.8 | bw | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR1750885 | Sensitive | lineage2.2.1 | zw | ERR1750917 | Sensitive | lineage2.2.1 | za | ERR1750907 | RR-TB | None | ERR1750929 | Sensitive | lineage4.1.1.3 | za | ERR4814791 | Sensitive | lineage4.1.2.1 | gb | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR1750919 | Sensitive | lineage4.4.1.1 | za | ERR1750944 | Other | lineage4.1.2 | za | ERR2229541 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4816958 | Sensitive | lineage4.8 | gb | ERR2229024 | Sensitive | lineage4 | None | ERR4815957 | HR-TB | lineage4.2.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR2229148 | Other | lineage4.8 | dk | ERR2229733 | Other | lineage4.8 | dk | ERR2229349 | Sensitive | lineage4.8 | dk | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675587 | Sensitive | lineage3 | None | ERR2229204 | Other | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR4817214 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | SRR5818426 | Other | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | SRR4033523 | Other | lineage2.2 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2229523 | Sensitive | lineage4.8 | None |
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